Jatropha Genome Database

JcCB0398861.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0398861.10 + phase: 1 /partial
         (185 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr6g009990.1 Phosphoglucose isomerase (PGI) chr06_pseudo...   328   1e-90

>IMGA|Medtr6g009990.1 Phosphoglucose isomerase (PGI)
           chr06_pseudomolecule_IMGAG_V3 1856654-1847350 E
           EGN_Mt090430 20090702
          Length = 568

 Score =  328 bits (841), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 149/185 (80%), Positives = 172/185 (92%)

Query: 1   EPGTNGQHSFYQLIHQGRIIPCDFIGVVKSQQPVYLEGEVVNNHDELMSNFFAQPDALAY 60
           EPGTNGQHSFYQLIHQGR+IPCDFIGVVKSQQPVYL+GEVV+NHDELMSNFFAQPDALAY
Sbjct: 384 EPGTNGQHSFYQLIHQGRVIPCDFIGVVKSQQPVYLKGEVVSNHDELMSNFFAQPDALAY 443

Query: 61  GKTAEQLQKENVPQNLIPHKTFSGNRPSLSILLSALDAYKIGQLLAIYEHRVVVQGFIWG 120
           GKT EQLQ ENV  +L+ HKTF+GNRPS+S+LL +L+AY +GQLLAIYEHR+ V+GFIWG
Sbjct: 444 GKTPEQLQNENVAPHLVSHKTFTGNRPSVSLLLPSLNAYNVGQLLAIYEHRIAVEGFIWG 503

Query: 121 INSFDQWGVELGKSLATQVRKQLHASRTKGEPVEGFNFSTTSLLKRYLEESSDVPKNPQT 180
           INSFDQWGVELGKSLATQVRKQL+ASRTKGEP++GFNFSTT+++ RYL+ S+DVP +P T
Sbjct: 504 INSFDQWGVELGKSLATQVRKQLNASRTKGEPIQGFNFSTTTMITRYLQASADVPADPPT 563

Query: 181 LLPRI 185
            LP+I
Sbjct: 564 TLPQI 568