Jatropha Genome Database
- JcCB0398801.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0398801.10 + phase: 0
(172 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr1g117600.1 AUX/IAA protein chr01_pseudomolecule_IMGAG_... 146 5e-36
IMGA|Medtr2g122570.1 AUX/IAA protein chr02_pseudomolecule_IMGAG_... 104 2e-23
IMGA|Medtr8g078700.1 AUX/IAA protein chr08_pseudomolecule_IMGAG_... 103 4e-23
IMGA|Medtr5g032240.1 AUX/IAA protein chr05_pseudomolecule_IMGAG_... 103 4e-23
IMGA|AC233783_2.1 AUX/IAA protein AC233783.1 17994-16063 E EGN_M... 102 1e-22
IMGA|AC233783_2.2 AUX/IAA protein AC233783.1 17994-15951 E EGN_M... 101 2e-22
IMGA|Medtr5g076260.1 AUX/IAA protein chr05_pseudomolecule_IMGAG_... 100 3e-22
IMGA|Medtr4g159330.1 AUX/IAA protein chr04_pseudomolecule_IMGAG_... 94 3e-20
IMGA|Medtr1g083410.1 AUX/IAA protein chr01_pseudomolecule_IMGAG_... 87 3e-18
IMGA|Medtr1g117720.1 AUX/IAA protein chr01_pseudomolecule_IMGAG_... 86 7e-18
IMGA|AC233668_17.1 AUX/IAA protein AC233668.2 65033-67329 F EGN_... 85 1e-17
IMGA|AC233668_17.2 AUX/IAA protein AC233668.2 65033-67329 F EGN_... 85 1e-17
IMGA|Medtr2g122050.1 AUX/IAA protein chr02_pseudomolecule_IMGAG_... 62 1e-10
IMGA|Medtr8g016050.1 AUX/IAA protein chr08_pseudomolecule_IMGAG_... 61 3e-10
IMGA|Medtr3g137460.1 AUX/IAA protein chr03_pseudomolecule_IMGAG_... 54 3e-08
IMGA|Medtr2g123410.1 AUX/IAA protein chr02_pseudomolecule_IMGAG_... 54 4e-08
>IMGA|Medtr1g117600.1 AUX/IAA protein chr01_pseudomolecule_IMGAG_V3
25280071-25283234 E EGN_Mt090430 20090702
Length = 236
Score = 146 bits (368), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 75/128 (58%), Positives = 89/128 (69%), Gaps = 6/128 (4%)
Query: 45 NGKRGFSETVDLKLNLSTXXXXXXXXXXXXTDVPSSNDPAKPPAKAQVVGWPPIRSFRKN 104
+GKRGFSETVDLKLNL T + DPAKPPAKAQVVGWPP+RS+RKN
Sbjct: 39 SGKRGFSETVDLKLNLQTKEDLNEKSASKEKTL--LKDPAKPPAKAQVVGWPPVRSYRKN 96
Query: 105 VMSVQKSNGDEAEKXXXXXXXXXXXXXFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKM 164
+M+ + +N ++ EK FVKVSMDGAPYLRKVDL +YK+Y++LSDAL KM
Sbjct: 97 MMAQKVNNTEDTEKTTSNTTAAA----FVKVSMDGAPYLRKVDLTMYKTYKDLSDALAKM 152
Query: 165 FSSFTIGN 172
FSSFT GN
Sbjct: 153 FSSFTTGN 160
>IMGA|Medtr2g122570.1 AUX/IAA protein chr02_pseudomolecule_IMGAG_V3
29440372-29437665 F EGN_Mt090430 20090702
Length = 326
Score = 104 bits (260), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 65/97 (67%), Gaps = 8/97 (8%)
Query: 77 VPSSNDPAKPPA-KAQVVGWPPIRSFRKNVMSVQKS-NGDEAEKXXXXXXXXXXXXXFVK 134
V +N+ A PA KAQVVGWPPIRSFRKN M+ + N DEAE +VK
Sbjct: 157 VSGTNEHANAPAAKAQVVGWPPIRSFRKNTMASNLTKNNDEAE------GKPEFDCLYVK 210
Query: 135 VSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIG 171
VSMDGAPYLRKVDLK Y +Y ELS AL KMF+ FTIG
Sbjct: 211 VSMDGAPYLRKVDLKTYNNYMELSSALEKMFTCFTIG 247
>IMGA|Medtr8g078700.1 AUX/IAA protein chr08_pseudomolecule_IMGAG_V3
16132304-16127004 E EGN_Mt090430 20090702
Length = 348
Score = 103 bits (257), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 58/87 (66%), Gaps = 6/87 (6%)
Query: 86 PPAKAQVVGWPPIRSFRKNVMSVQKSNGDEAEKXXXXXXXXXXXXXFVKVSMDGAPYLRK 145
P AKAQVVGWPPIRSFRKN ++ N DE + FVKVSMDGAPYLRK
Sbjct: 190 PAAKAQVVGWPPIRSFRKNSLATTSKNNDEVD------GKPGAAALFVKVSMDGAPYLRK 243
Query: 146 VDLKLYKSYQELSDALGKMFSSFTIGN 172
VDL+ Y +YQELS L KMFS FT+G
Sbjct: 244 VDLRNYTTYQELSSDLEKMFSCFTLGQ 270
>IMGA|Medtr5g032240.1 AUX/IAA protein chr05_pseudomolecule_IMGAG_V3
13000024-12994499 F EGN_Mt090430 20090702
Length = 335
Score = 103 bits (257), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 61/89 (68%), Gaps = 7/89 (7%)
Query: 84 AKPPAKAQVVGWPPIRSFRKNVM-SVQKSNGDEAEKXXXXXXXXXXXXXFVKVSMDGAPY 142
P +KAQVVGWPPIRSFRKN M + K+N DE + FVKVSMDGAPY
Sbjct: 174 CAPASKAQVVGWPPIRSFRKNSMATASKNNNDEVD------GKPGPAALFVKVSMDGAPY 227
Query: 143 LRKVDLKLYKSYQELSDALGKMFSSFTIG 171
LRKVDL+ Y +YQ+LS AL KMFS FT+G
Sbjct: 228 LRKVDLRTYATYQQLSSALEKMFSCFTLG 256
>IMGA|AC233783_2.1 AUX/IAA protein AC233783.1 17994-16063 E
EGN_Mt090430 20090702
Length = 193
Score = 102 bits (253), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 75/127 (59%), Gaps = 11/127 (8%)
Query: 46 GKRGFSETVDLKLNLSTXXXXXXXXXXXXTDVPSSNDPAKPPAKAQVVGWPPIRSFRKNV 105
KRGFS+ +D++ + S + + + AK QVVGWPPIRSFRKN
Sbjct: 57 AKRGFSDAIDMRKS-SNQQGSVAKDQTNPLNEKKKSQISGSAAKEQVVGWPPIRSFRKNS 115
Query: 106 MSVQ--KSNGDEAEKXXXXXXXXXXXXXFVKVSMDGAPYLRKVDLKLYKSYQELSDALGK 163
M+ Q K++ D+ E +VKVSMDGAPYLRKVDLK++ +Y+ELS AL K
Sbjct: 116 MATQSQKNDNDDVE--------AKSGCLYVKVSMDGAPYLRKVDLKIFGTYKELSSALEK 167
Query: 164 MFSSFTI 170
MFS FTI
Sbjct: 168 MFSCFTI 174
>IMGA|AC233783_2.2 AUX/IAA protein AC233783.1 17994-15951 E
EGN_Mt090430 20090702
Length = 222
Score = 101 bits (252), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 75/126 (59%), Gaps = 11/126 (8%)
Query: 47 KRGFSETVDLKLNLSTXXXXXXXXXXXXTDVPSSNDPAKPPAKAQVVGWPPIRSFRKNVM 106
KRGFS+ +D++ + S + + + AK QVVGWPPIRSFRKN M
Sbjct: 58 KRGFSDAIDMRKS-SNQQGSVAKDQTNPLNEKKKSQISGSAAKEQVVGWPPIRSFRKNSM 116
Query: 107 SVQ--KSNGDEAEKXXXXXXXXXXXXXFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKM 164
+ Q K++ D+ E +VKVSMDGAPYLRKVDLK++ +Y+ELS AL KM
Sbjct: 117 ATQSQKNDNDDVE--------AKSGCLYVKVSMDGAPYLRKVDLKIFGTYKELSSALEKM 168
Query: 165 FSSFTI 170
FS FTI
Sbjct: 169 FSCFTI 174
>IMGA|Medtr5g076260.1 AUX/IAA protein chr05_pseudomolecule_IMGAG_V3
27878822-27882652 F EGN_Mt090430 20090702
Length = 347
Score = 100 bits (250), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/86 (59%), Positives = 58/86 (67%), Gaps = 5/86 (5%)
Query: 86 PPAKAQVVGWPPIRSFRKNVMSVQKSNGDEAEKXXXXXXXXXXXXXFVKVSMDGAPYLRK 145
P +KAQVVGWPPIRSFRKN ++ N +E + FVKVSMDGAPYLRK
Sbjct: 191 PASKAQVVGWPPIRSFRKNSLTTASKNTEEVD-----GKLGSGGAVFVKVSMDGAPYLRK 245
Query: 146 VDLKLYKSYQELSDALGKMFSSFTIG 171
VDLK Y +Y ELS +L KMFS FTIG
Sbjct: 246 VDLKNYTAYSELSSSLEKMFSCFTIG 271
>IMGA|Medtr4g159330.1 AUX/IAA protein chr04_pseudomolecule_IMGAG_V3
40172991-40176335 E EGN_Mt090430 20090702
Length = 293
Score = 94.4 bits (233), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/86 (59%), Positives = 57/86 (66%), Gaps = 9/86 (10%)
Query: 86 PPAKAQVVGWPPIRSFRKNVMSVQKSNGD-EAEKXXXXXXXXXXXXXFVKVSMDGAPYLR 144
P +KAQVVGWPPIRSFRKN M Q D +AE +VKVSM+GAPYLR
Sbjct: 135 PSSKAQVVGWPPIRSFRKNSMVSQPQKNDADAE--------AKSECLYVKVSMEGAPYLR 186
Query: 145 KVDLKLYKSYQELSDALGKMFSSFTI 170
KVDL + SY+ELS AL KMFS FTI
Sbjct: 187 KVDLNGFSSYRELSSALEKMFSCFTI 212
>IMGA|Medtr1g083410.1 AUX/IAA protein chr01_pseudomolecule_IMGAG_V3
16394826-16396206 E EGN_Mt090430 20090702
Length = 204
Score = 87.4 bits (215), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 56/86 (65%), Gaps = 16/86 (18%)
Query: 86 PPAKAQVVGWPPIRSFRKNVMSVQKSNGDEAEKXXXXXXXXXXXXXFVKVSMDGAPYLRK 145
PP+KAQVVGWPPIRS+RKN S+Q+ G+E ++KVSM GAPYLRK
Sbjct: 79 PPSKAQVVGWPPIRSYRKN--SLQQKKGEEV-------------GMYLKVSMAGAPYLRK 123
Query: 146 VDLKLYKSYQELSDALGKMFSSFTIG 171
+DLK+YKSY EL L MF TIG
Sbjct: 124 IDLKVYKSYSELLKVLENMFKC-TIG 148
>IMGA|Medtr1g117720.1 AUX/IAA protein chr01_pseudomolecule_IMGAG_V3
25340896-25342268 F EGN_Mt090430 20090702
Length = 178
Score = 86.3 bits (212), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 59/93 (63%), Gaps = 18/93 (19%)
Query: 80 SNDPAKPPAKAQVVGWPPIRSFRKNVMSVQKSNGDEAEKXXXXXXXXXXXXXFVKVSMDG 139
++D A PP+KA++VGWPPIRS+RKN + +++G +VKVS+DG
Sbjct: 52 TSDDAAPPSKAKIVGWPPIRSYRKNSLQEAEASG-----------------IYVKVSLDG 94
Query: 140 APYLRKVDLKLYKSYQELSDALGKMFSSFTIGN 172
APYLRK+DL++Y Y +L AL MF TIGN
Sbjct: 95 APYLRKIDLRVYGGYAQLLKALESMF-KLTIGN 126
>IMGA|AC233668_17.1 AUX/IAA protein AC233668.2 65033-67329 F
EGN_Mt090430 20090702
Length = 186
Score = 85.1 bits (209), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 53/89 (59%), Gaps = 18/89 (20%)
Query: 84 AKPPAKAQVVGWPPIRSFRKNVMSVQKSNGDEAEKXXXXXXXXXXXXXFVKVSMDGAPYL 143
A PPAKA++VGWPPIRS+RKN + + G +VKVSMDGAPYL
Sbjct: 60 AAPPAKAKIVGWPPIRSYRKNTLQEAEVGG-----------------IYVKVSMDGAPYL 102
Query: 144 RKVDLKLYKSYQELSDALGKMFSSFTIGN 172
RK+DL++Y Y EL AL MF TIG
Sbjct: 103 RKIDLRIYGGYPELLKALETMF-KLTIGE 130
>IMGA|AC233668_17.2 AUX/IAA protein AC233668.2 65033-67329 F
EGN_Mt090430 20090702
Length = 162
Score = 85.1 bits (209), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 53/89 (59%), Gaps = 18/89 (20%)
Query: 84 AKPPAKAQVVGWPPIRSFRKNVMSVQKSNGDEAEKXXXXXXXXXXXXXFVKVSMDGAPYL 143
A PPAKA++VGWPPIRS+RKN + + G +VKVSMDGAPYL
Sbjct: 60 AAPPAKAKIVGWPPIRSYRKNTLQEAEVGG-----------------IYVKVSMDGAPYL 102
Query: 144 RKVDLKLYKSYQELSDALGKMFSSFTIGN 172
RK+DL++Y Y EL AL MF TIG
Sbjct: 103 RKIDLRIYGGYPELLKALETMF-KLTIGE 130
>IMGA|Medtr2g122050.1 AUX/IAA protein chr02_pseudomolecule_IMGAG_V3
29123619-29119970 E EGN_Mt090430 20090702
Length = 269
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 45/98 (45%), Gaps = 12/98 (12%)
Query: 80 SNDPAKPPAKAQVVGWPPIRSFRKNVMS------------VQKSNGDEAEKXXXXXXXXX 127
SN K A VVGWPPIRSFRKN+ + Q+ +
Sbjct: 85 SNTSQKRTAPGPVVGWPPIRSFRKNLATSSSSKPSPPESQTQQDMHNNVSAGKKPIDNNY 144
Query: 128 XXXXFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMF 165
FVK++MDG P RKVDL Y SY LS A+ +F
Sbjct: 145 GKGLFVKINMDGVPIGRKVDLNAYHSYDNLSSAVDDLF 182
>IMGA|Medtr8g016050.1 AUX/IAA protein chr08_pseudomolecule_IMGAG_V3
2999212-2995668 F EGN_Mt090430 20090702
Length = 271
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Query: 88 AKAQVVGWPPIRSFRKNVMSVQKSN---------GDEAEKXXXXXXXXXXXXXFVKVSMD 138
A + VVGWPPIRSFRKN+ S S D+ FVK++MD
Sbjct: 104 AASPVVGWPPIRSFRKNIASGSSSKPPTESRPMVQDKVIVDSNKPISNSGKGLFVKINMD 163
Query: 139 GAPYLRKVDLKLYKSYQELSDALGKMF 165
G P RK+D+ Y SY++LS A+ +F
Sbjct: 164 GVPIGRKIDINAYDSYEKLSSAVDDLF 190
>IMGA|Medtr3g137460.1 AUX/IAA protein chr03_pseudomolecule_IMGAG_V3
34861254-34858528 E EGN_Mt090430 20090702
Length = 213
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 88 AKAQVVGWPPIRSFRKNVMSVQKSNGDEAEKXXXXXXXXXXXXXFVKVSMDGAPYLRKVD 147
+ +VGWPPI+S+RK Q+ E + +VKV+M+G R+++
Sbjct: 85 GENHLVGWPPIKSWRKKEFHDQQL--PEHIRKANENQNRRSKPLYVKVNMEGVGMGRQIN 142
Query: 148 LKLYKSYQELSDALGKMF 165
L+LY SYQ L D+L MF
Sbjct: 143 LRLYNSYQTLKDSLISMF 160
>IMGA|Medtr2g123410.1 AUX/IAA protein chr02_pseudomolecule_IMGAG_V3
29935021-29936158 H EGN_Mt090430 20090702
Length = 198
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 33/43 (76%), Gaps = 2/43 (4%)
Query: 132 FVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSS--FTIGN 172
+VKV++DGAPYLRKVDL++Y+ Y L AL MFS+ FTI N
Sbjct: 88 YVKVAVDGAPYLRKVDLEVYECYDNLLTALNTMFSTNCFTIRN 130