Jatropha Genome Database

JcCB0398651.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0398651.10 + phase: 0 
         (149 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g150890.1 hypothetical protein chr03_pseudomolecule_I...   199   5e-52
IMGA|Medtr5g103770.1 TPD1  putative chr05_pseudomolecule_IMGAG_V...   150   2e-37
IMGA|Medtr2g038250.1 TPD1  related chr02_pseudomolecule_IMGAG_V3...   118   1e-27
IMGA|Medtr8g137550.1 TPD1  related chr08_pseudomolecule_IMGAG_V3...   107   2e-24
IMGA|Medtr8g137110.1 TPD1  related chr08_pseudomolecule_IMGAG_V3...   107   2e-24
IMGA|Medtr2g029350.1 hypothetical protein chr02_pseudomolecule_I...    74   3e-14

>IMGA|Medtr3g150890.1 hypothetical protein
           chr03_pseudomolecule_IMGAG_V3 39843291-39848725 E
           EGN_Mt090430 20090702
          Length = 343

 Score =  199 bits (506), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 92/113 (81%), Positives = 103/113 (91%), Gaps = 1/113 (0%)

Query: 35  TALAMEEPNRIWGEK-CTKADIVINQGPTAPLPSGIPTYTVEIMNVCVTGCDISGIHLTC 93
           +A    EPNRIWG+K C+K+DIVINQG TAPLPSGIPTYTVEIMN+CV+GCDIS IHL C
Sbjct: 75  SATERLEPNRIWGDKKCSKSDIVINQGSTAPLPSGIPTYTVEIMNMCVSGCDISAIHLRC 134

Query: 94  GWFSSARLINPKIFKRLRYNDCLVNDGKPLVNGGTLSFEYANTFHYPLSVSSV 146
           GWFSSARLINPK+FKRLRYNDCLVNDG+PLVNGGT+SF+YANT+ YPLSVSS 
Sbjct: 135 GWFSSARLINPKLFKRLRYNDCLVNDGRPLVNGGTVSFQYANTYLYPLSVSSA 187


>IMGA|Medtr5g103770.1 TPD1  putative chr05_pseudomolecule_IMGAG_V3
           41571001-41569289 H EGN_Mt090430 20090702
          Length = 155

 Score =  150 bits (379), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 69/104 (66%), Positives = 82/104 (78%)

Query: 45  IWGEKCTKADIVINQGPTAPLPSGIPTYTVEIMNVCVTGCDISGIHLTCGWFSSARLINP 104
           I  +KC K+ I INQ PT PLP+GIP YTVEI+N C++G +IS IH+ CG FSSARLI+P
Sbjct: 51  IIDDKCDKSSIQINQAPTTPLPNGIPQYTVEIVNTCLSGYNISNIHIDCGMFSSARLIDP 110

Query: 105 KIFKRLRYNDCLVNDGKPLVNGGTLSFEYANTFHYPLSVSSVIC 148
            IFKRL Y+DCLVN GKP  NG  +SF YANT+ YPLSVSSV+C
Sbjct: 111 TIFKRLNYSDCLVNSGKPFPNGKVISFSYANTYPYPLSVSSVVC 154


>IMGA|Medtr2g038250.1 TPD1  related chr02_pseudomolecule_IMGAG_V3
           10679590-10678697 H EGN_Mt090430 20090702
          Length = 161

 Score =  118 bits (296), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 57/110 (51%), Positives = 73/110 (66%), Gaps = 3/110 (2%)

Query: 38  AMEEPNRIWGE-KCTKADIVINQGPTAPLPSGIPTYTVEIMNVCVTGCDISGIHLTCGWF 96
           A   P + W    CTK DI I+Q   +   SGIP Y V+I+N CV+GC    IHL CGWF
Sbjct: 51  AHYTPRKFWFHGSCTKRDISISQSKGST--SGIPQYIVQIVNTCVSGCAPYDIHLHCGWF 108

Query: 97  SSARLINPKIFKRLRYNDCLVNDGKPLVNGGTLSFEYANTFHYPLSVSSV 146
           +SAR+INPK+FKRL Y+DCLV+ GKPL +   + F Y+N+F YPL+  S 
Sbjct: 109 ASARIINPKLFKRLSYDDCLVHGGKPLTSNQIIRFTYSNSFMYPLAFKSA 158


>IMGA|Medtr8g137550.1 TPD1  related chr08_pseudomolecule_IMGAG_V3
           32976253-32975511 H EGN_Mt090430 20090702
          Length = 165

 Score =  107 bits (268), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 52/102 (50%), Positives = 68/102 (66%), Gaps = 3/102 (2%)

Query: 46  WGEKCTKADIVINQGPTAPLPSGIPTYTVEIMNVCVTG-CDISGIHLTCGWFSSARLINP 104
           W   CT  DI I+Q  +    +GIP Y V+I+N CV+  C    IHL CGWF+SAR+INP
Sbjct: 63  WHGSCTNKDISISQ--SRETLTGIPKYVVQIVNTCVSSECAPYNIHLHCGWFASARIINP 120

Query: 105 KIFKRLRYNDCLVNDGKPLVNGGTLSFEYANTFHYPLSVSSV 146
           K+FKRL ++DCLVN GKPL +   + F Y N+F YPL++ S 
Sbjct: 121 KLFKRLSFDDCLVNGGKPLTSSQIIRFTYTNSFVYPLALKSA 162


>IMGA|Medtr8g137110.1 TPD1  related chr08_pseudomolecule_IMGAG_V3
           32824326-32825036 H EGN_Mt090430 20090702
          Length = 165

 Score =  107 bits (268), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 52/102 (50%), Positives = 68/102 (66%), Gaps = 3/102 (2%)

Query: 46  WGEKCTKADIVINQGPTAPLPSGIPTYTVEIMNVCVTG-CDISGIHLTCGWFSSARLINP 104
           W   CT  DI I+Q  +    +GIP Y V+I+N CV+  C    IHL CGWF+SAR+INP
Sbjct: 63  WHGSCTNKDISISQ--SRETLTGIPKYVVQIVNTCVSSECAPYNIHLHCGWFASARIINP 120

Query: 105 KIFKRLRYNDCLVNDGKPLVNGGTLSFEYANTFHYPLSVSSV 146
           K+FKRL ++DCLVN GKPL +   + F Y N+F YPL++ S 
Sbjct: 121 KLFKRLSFDDCLVNGGKPLTSSQIIRFTYTNSFVYPLALKSA 162


>IMGA|Medtr2g029350.1 hypothetical protein
           chr02_pseudomolecule_IMGAG_V3 7805711-7806213 H
           EGN_Mt090430 20090702
          Length = 102

 Score = 73.6 bits (179), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 55/96 (57%), Gaps = 3/96 (3%)

Query: 51  TKADIVINQGPTAPLPSGIPTYTVEIMNVCVTGCDISGIHLTCGWFSSARLINPKIFKRL 110
            + DI I+Q   +   SGIP Y ++I+N CV GC  + IHL CGWF+SAR+ NP++FKRL
Sbjct: 7   AQRDISISQNKGST--SGIPQYIMQIVNTCVFGCAPNDIHLHCGWFASARINNPRLFKRL 64

Query: 111 RYNDCLVNDGKPLVNGGTLSFEYANTFHYPLSVSSV 146
            Y        +   +   + F Y+N+   PL+  S 
Sbjct: 65  SYG-WFGEWREAFTSSQIIRFTYSNSLMKPLAFKSA 99