Jatropha Genome Database
- JcCB0396881.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0396881.10 + phase: 0 /pseudo/partial
(92 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr2g008900.1 Protein phosphatase 2C-like; chr02_pseudomo... 70 2e-13
IMGA|Medtr5g072790.1 Protein phosphatase 2C-like; chr05_pseudomo... 66 4e-12
IMGA|Medtr5g072790.2 Protein phosphatase 2C-like; chr05_pseudomo... 52 6e-08
IMGA|Medtr3g124450.3 Protein phosphatase 2C; chr03_pseudomolecul... 50 2e-07
IMGA|Medtr3g124450.2 Protein phosphatase 2C; chr03_pseudomolecul... 50 2e-07
IMGA|Medtr3g124450.1 Protein phosphatase 2C; chr03_pseudomolecul... 50 3e-07
IMGA|Medtr1g016250.2 Protein phosphatase 2C; chr01_pseudomolecul... 47 3e-06
IMGA|Medtr1g016250.1 Protein phosphatase 2C; chr01_pseudomolecul... 46 4e-06
>IMGA|Medtr2g008900.1 Protein phosphatase 2C-like;
chr02_pseudomolecule_IMGAG_V3 1842008-1845587 E
EGN_Mt090430 20090702
Length = 281
Score = 70.5 bits (171), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/59 (54%), Positives = 40/59 (67%)
Query: 26 HGYHMVRGKMGHGMEDYLVAESREINGYRLGLYAIFDGHSGLDVAKYLQSHLFDNLLNE 84
+G+ +V G H MED+ VA+ + NG LGL+AIFDGHSG V YLQ HLF N+L E
Sbjct: 34 YGFCLVEGTQDHTMEDFHVAKIVQFNGRELGLFAIFDGHSGDTVPAYLQKHLFSNILKE 92
>IMGA|Medtr5g072790.1 Protein phosphatase 2C-like;
chr05_pseudomolecule_IMGAG_V3 25998361-26002733 E
EGN_Mt090430 20090702
Length = 282
Score = 66.2 bits (160), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 40/59 (67%)
Query: 26 HGYHMVRGKMGHGMEDYLVAESREINGYRLGLYAIFDGHSGLDVAKYLQSHLFDNLLNE 84
+G+ +V+G+ H MEDY VA ++ G LGL+AI+DGH G V YLQ +LF N+L E
Sbjct: 35 YGFTLVKGRANHPMEDYHVANFVQVQGKELGLFAIYDGHLGDQVPSYLQKNLFSNILKE 93
>IMGA|Medtr5g072790.2 Protein phosphatase 2C-like;
chr05_pseudomolecule_IMGAG_V3 25998361-26002733 E
EGN_Mt090430 20090702
Length = 235
Score = 52.4 bits (124), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 31/46 (67%)
Query: 39 MEDYLVAESREINGYRLGLYAIFDGHSGLDVAKYLQSHLFDNLLNE 84
MEDY VA ++ G LGL+AI+DGH G V YLQ +LF N+L E
Sbjct: 1 MEDYHVANFVQVQGKELGLFAIYDGHLGDQVPSYLQKNLFSNILKE 46
>IMGA|Medtr3g124450.3 Protein phosphatase 2C;
chr03_pseudomolecule_IMGAG_V3 31541253-31547632 E
EGN_Mt090430 20090702
Length = 315
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 27 GYHMVRGKMGHGMEDYLVAESREINGYRLGLYAIFDGHSGLDVAKYLQSHLFDNLL 82
GY RGK MED+ ++ I+G + L+ IFDGH G A+YL+ HLF+NL+
Sbjct: 47 GYSSFRGKRV-TMEDFYDIKTSTIDGRSVCLFGIFDGHGGSRAAEYLKDHLFENLM 101
>IMGA|Medtr3g124450.2 Protein phosphatase 2C;
chr03_pseudomolecule_IMGAG_V3 31541253-31547632 E
EGN_Mt090430 20090702
Length = 368
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 27 GYHMVRGKMGHGMEDYLVAESREINGYRLGLYAIFDGHSGLDVAKYLQSHLFDNLL 82
GY RGK MED+ ++ I+G + L+ IFDGH G A+YL+ HLF+NL+
Sbjct: 100 GYSSFRGKR-VTMEDFYDIKTSTIDGRSVCLFGIFDGHGGSRAAEYLKDHLFENLM 154
>IMGA|Medtr3g124450.1 Protein phosphatase 2C;
chr03_pseudomolecule_IMGAG_V3 31541253-31547632 E
EGN_Mt090430 20090702
Length = 389
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 27 GYHMVRGKMGHGMEDYLVAESREINGYRLGLYAIFDGHSGLDVAKYLQSHLFDNLL 82
GY RGK MED+ ++ I+G + L+ IFDGH G A+YL+ HLF+NL+
Sbjct: 100 GYSSFRGKR-VTMEDFYDIKTSTIDGRSVCLFGIFDGHGGSRAAEYLKDHLFENLM 154
>IMGA|Medtr1g016250.2 Protein phosphatase 2C;
chr01_pseudomolecule_IMGAG_V3 3110099-3104569 E
EGN_Mt090430 20090702
Length = 337
Score = 46.6 bits (109), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 26 HGYHMVRGKMGHGMEDYLVAESREINGYRLGLYAIFDGHSGLDVAKYLQSHLFDNLLN 83
+GY GK MED+ ING +GL+ +FDGH G A+Y++ +LF NL++
Sbjct: 78 YGYASSPGKRS-SMEDFYETRIDGINGEVVGLFGVFDGHGGARAAEYVKQNLFSNLIS 134
>IMGA|Medtr1g016250.1 Protein phosphatase 2C;
chr01_pseudomolecule_IMGAG_V3 3110099-3104569 E
EGN_Mt090430 20090702
Length = 347
Score = 46.2 bits (108), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 26 HGYHMVRGKMGHGMEDYLVAESREINGYRLGLYAIFDGHSGLDVAKYLQSHLFDNLLN 83
+GY GK MED+ ING +GL+ +FDGH G A+Y++ +LF NL++
Sbjct: 78 YGYASSPGKRS-SMEDFYETRIDGINGEVVGLFGVFDGHGGARAAEYVKQNLFSNLIS 134