Jatropha Genome Database

JcCB0394911.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0394911.10 - phase: 0 /partial
         (473 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g025570.1 hypothetical protein chr08_pseudomolecule_I...   460   e-130
IMGA|Medtr5g009640.1 hypothetical protein chr05_pseudomolecule_I...   271   4e-73
IMGA|Medtr3g043360.1 hypothetical protein chr03_pseudomolecule_I...    71   1e-12
IMGA|Medtr3g043370.1 Transferase chr03_pseudomolecule_IMGAG_V3 1...    55   7e-08

>IMGA|Medtr8g025570.1 hypothetical protein
           chr08_pseudomolecule_IMGAG_V3 5222331-5218168 E
           EGN_Mt090430 20090702
          Length = 700

 Score =  460 bits (1183), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 237/452 (52%), Positives = 303/452 (67%), Gaps = 15/452 (3%)

Query: 1   AIESGRLPGDILDDIPRKYVNGTLICEVRDYRKCPPEQGSCIPSVGWLPIVNRVRLRMSL 60
           AIESG LP DILDDIP KYV+G LICEVRDYR+C  E+G+ I SV   P VN+V L+MSL
Sbjct: 103 AIESGHLPADILDDIPAKYVDGALICEVRDYRRCSSEKGAGIASVEISPTVNKVCLKMSL 162

Query: 61  ENVVKDIPLISDNSWTYGDLMEVESRILKALQPRLFLDPTPKLDRLCNNPTATXXXXXXX 120
           EN+VKDIP I+D SWTYGDLMEVES+ILKALQP L LDPTPKLDRLC +P  T       
Sbjct: 163 ENIVKDIPSITDKSWTYGDLMEVESKILKALQPNLHLDPTPKLDRLCQSPFPTKRKRLR- 221

Query: 121 XXXXXXXXQMPEVTVTSSSRIHGKKVCIDRVLESSNSRLGDSGMISGNMMPQSVQENLTT 180
                    +PE+ VTSS++IHGKKVCIDRV E+SN+RLGDSG+ + N + Q   EN   
Sbjct: 222 --------NIPELAVTSSNKIHGKKVCIDRVQENSNNRLGDSGVTTSNAIVQQTLENPAM 273

Query: 181 QNLVPNMLPLRARSFVSDGNVSALPLVSQQSRYQLGLGTPRSMQDQGSGSLVNIPGASPA 240
           QNL P+ + +R+++ + D ++    ++  QSRY + +GT RSM + GS + +N  GASPA
Sbjct: 274 QNLNPS-IAMRSKNAIPDSSIPGFSMMPHQSRYPMAVGTQRSMLEHGSIAGINSSGASPA 332

Query: 241 GQDMMITYGDHINSGASLHGKRENQDGQMSPLSSFNKRARVTSVGPDGMQQQQLGPHIDG 300
            QD+ I+Y D+ N+  S H KREN DGQ SPLS+  KR R  S G D MQQ Q+G H+D 
Sbjct: 333 TQDVTISYADNPNASVSFHAKRENPDGQSSPLSNIAKRMRPASTGVDAMQQHQIGSHVDA 392

Query: 301 LHASDMNWKNSLLPHQATARGIHYANTGIQKYPQQVFEGVMNQNAMPTSFSAPQQGVRFG 360
           L  SDMNW+N+LL  QA AR I Y   G+QK+PQQ FEG +NQ+     F++ QQG+R  
Sbjct: 393 LQGSDMNWQNTLLQQQAMARSIQYTGGGVQKFPQQGFEGGLNQDTGAIQFASGQQGMRLV 452

Query: 361 PKEEQFETEKLDVSELNQGKNDMMDTEMGHXXXXXXXXXXXXXXXXMRSNFSQTAWNNLS 420
            KEEQFE E++D + +N+ K+++                       MRSNF QT WN+L 
Sbjct: 453 AKEEQFEMERIDGAGINRNKSELEMDASNLDPQQLRLQQRMPQHAFMRSNFPQTTWNSLG 512

Query: 421 Q----DSRKEEQIQGKRKTVQSPRLSAGTFPQ 448
           Q    +++KE+Q+Q KRK VQSPRLS+GT P 
Sbjct: 513 QQIEKEAKKEDQLQ-KRKQVQSPRLSSGTLPH 543


>IMGA|Medtr5g009640.1 hypothetical protein
           chr05_pseudomolecule_IMGAG_V3 2161133-2165674 E
           EGN_Mt090430 20090702
          Length = 849

 Score =  271 bits (694), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 166/384 (43%), Positives = 227/384 (59%), Gaps = 22/384 (5%)

Query: 65  KDIPLISDNSWTYGDLMEVESRILKALQPRLFLDPTPKLDRLCNNPTATXXXXXXXXXXX 124
           K+IP ++D S TYGD +EVES+I KALQP L L PTPKLDRLC +   T           
Sbjct: 335 KNIPSLTDKSQTYGDTLEVESKIPKALQPNLHLGPTPKLDRLCESRLPTQLNFQRKRLRI 394

Query: 125 XXXXQMPEVTVTSSSRIHGKKVCIDRVLESSNSRLGDSGMISGNMMPQSVQENLTTQNLV 184
                +PE+ VTSS++I GKK CID V E+S+SR G+S + + N + +   EN   QNL 
Sbjct: 395 -----IPELAVTSSNKIPGKKECIDGVHENSDSRFGESRITTSNAIVKQTLENPVMQNLN 449

Query: 185 PNMLPLRARSFVSDGNVSALPLVSQQSRYQLGLGTPRSMQDQGSGSLVNIPGASPAGQDM 244
           P+ + + +++ V   ++  + ++S QS+Y + +GTPRS+Q+ GS S +   GAS A Q  
Sbjct: 450 PS-IAMGSKNIVPYSSIPGVSMMSHQSKYPMVVGTPRSLQEHGSISGIKSSGAS-AVQYA 507

Query: 245 MITYGDHINSGASLHGKRENQDGQMSPLSSFNKRARVTSVGPDGMQQQQLGPHIDGLHAS 304
           M +Y D+ N+  SLH KRE+ D Q S L +  KR R  S G D MQQ  +G H D L  S
Sbjct: 508 MHSYADNPNASVSLHVKRESPDRQSSRLPNIAKRMRSASTGVDAMQQ--IGSHGDALQGS 565

Query: 305 DMNWKNSLLPHQATARGIHYANTGIQKYPQQVFEGVMNQNAMPTSFSAPQQGVRFGPKEE 364
           DMNW++ LL  QA ARGI Y   GIQK+PQQVF+G +NQ      FS+ QQG+R   K +
Sbjct: 566 DMNWQDRLLQQQAIARGIQYIGGGIQKFPQQVFDGGLNQETGAIQFSSGQQGMRLVDKVD 625

Query: 365 QFETEKLDVSELNQGKNDMMDTEMGHXXXXXXXXXXXXXXXXMRSNFSQTAWNNLSQDSR 424
           QFE E+ D + +N+ K     +E                   MR NF Q       ++++
Sbjct: 626 QFEMERKDGARINRIK-----SEFEMYARNLWLQQRMPQHASMRPNFPQ-------KEAK 673

Query: 425 KEEQIQGKRKTVQSPRLSAGTFPQ 448
           KE+Q+Q KRK +QSPRLS+GT P 
Sbjct: 674 KEDQLQ-KRKQIQSPRLSSGTLPH 696



 Score =  209 bits (531), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 106/187 (56%), Positives = 128/187 (68%), Gaps = 5/187 (2%)

Query: 1   AIESGRLPGDILDDIPRKYVNGTLICEVRDYRKCPPEQGSCIPSVGWLPIVNRVRLRMSL 60
           AIESG LPGDILDDIP KYV+G LICEVRDYR+C  ++ + I SV   P VN+V L+MSL
Sbjct: 148 AIESGHLPGDILDDIPAKYVDGALICEVRDYRRCSSKKRAGIVSVESSPTVNKVCLKMSL 207

Query: 61  ENVVKDIPLISDNSWTYGDLMEVESRILKALQPRLFLDPTPKLDRLCNNPTATXXXXXXX 120
           EN+VKDIP  +D SWTYGD+MEVES I+KALQP L LDPTPKLDRLC N   T       
Sbjct: 208 ENIVKDIPSFTDKSWTYGDIMEVESNIVKALQPNLHLDPTPKLDRLCENRLPT-----KL 262

Query: 121 XXXXXXXXQMPEVTVTSSSRIHGKKVCIDRVLESSNSRLGDSGMISGNMMPQSVQENLTT 180
                    +PE  V SS+ IHG KV IDRV E++ SRL DS + + N + +   +NL  
Sbjct: 263 NLQRKRLRNIPEFAVASSNNIHGIKVYIDRVQENTKSRLNDSRITTSNAIVKQTLKNLAV 322

Query: 181 QNLVPNM 187
           QNL P++
Sbjct: 323 QNLNPSI 329


>IMGA|Medtr3g043360.1 hypothetical protein
           chr03_pseudomolecule_IMGAG_V3 11742285-11742602 H
           EGN_Mt090430 20090702
          Length = 73

 Score = 70.9 bits (172), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/56 (57%), Positives = 41/56 (73%), Gaps = 5/56 (8%)

Query: 58  MSLENVVKDIPLISDNSWTYGDLMEVESRILKALQPRLFLDPTPKLDRLCNNPTAT 113
           MSL+N+VKDIP ++D SWTYGD++     I+KAL P + LD TP LDRLC +P  T
Sbjct: 1   MSLKNIVKDIPSLTDKSWTYGDII-----IVKALHPNIHLDHTPMLDRLCQSPLPT 51


>IMGA|Medtr3g043370.1 Transferase chr03_pseudomolecule_IMGAG_V3
           11745191-11742655 E EGN_Mt090430 20090702
          Length = 236

 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 37/52 (71%), Gaps = 3/52 (5%)

Query: 30  DYRKCPPEQGSCIPSVGWLPIVNRVRLRMSLENVVKDIPLISDNSWTYGDLM 81
           DYR+C    G+ I S    P V++V L++SLEN+VKDIP +++ SW YGD+M
Sbjct: 181 DYRRC---SGAGIVSTESSPTVSKVFLKISLENIVKDIPSLTEKSWIYGDIM 229