Jatropha Genome Database

JcCB0392661.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0392661.10 - phase: 0 /partial
         (55 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g088540.1 Folylpolyglutamate synthetase chr05_pseudom...    73   4e-14
IMGA|Medtr3g092210.2 Folylpolyglutamate synthetase chr03_pseudom...    60   3e-10
IMGA|Medtr3g092240.1 Folylpolyglutamate synthetase chr03_pseudom...    60   3e-10
IMGA|Medtr3g092210.1 Folylpolyglutamate synthetase chr03_pseudom...    60   4e-10
IMGA|Medtr3g092210.4 Folylpolyglutamate synthetase chr03_pseudom...    59   7e-10

>IMGA|Medtr5g088540.1 Folylpolyglutamate synthetase
          chr05_pseudomolecule_IMGAG_V3 34328848-34334130 E
          EGN_Mt090430 20090702
          Length = 543

 Score = 72.8 bits (177), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/55 (61%), Positives = 47/55 (85%), Gaps = 2/55 (3%)

Query: 1  MAEVE--SGSPKRTATTPYEEAMDALSSLITKRTRADKSNKGDRFDLLFDYLKVI 53
          M+E E  +GSPK ++ TPYEEA++ALSSLI +RTRAD +N GD+FD+LF+YLK++
Sbjct: 1  MSEQEGGNGSPKSSSLTPYEEALEALSSLIIRRTRADGTNFGDQFDVLFEYLKML 55


>IMGA|Medtr3g092210.2 Folylpolyglutamate synthetase
          chr03_pseudomolecule_IMGAG_V3 21627337-21619766 E
          EGN_Mt090430 20090702
          Length = 441

 Score = 59.7 bits (143), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/51 (56%), Positives = 40/51 (78%), Gaps = 3/51 (5%)

Query: 3  EVESGSPKRTATTPYEEAMDALSSLITKRTRADKSNKGDRFDLLFDYLKVI 53
          E ++GSPK   ++PYEEA++ALSSLITKRTR    N  +RF +LF+YLK++
Sbjct: 4  EGDNGSPK---SSPYEEALEALSSLITKRTRVGDVNMEERFLVLFEYLKML 51


>IMGA|Medtr3g092240.1 Folylpolyglutamate synthetase
          chr03_pseudomolecule_IMGAG_V3 21643018-21634422 E
          EGN_Mt090430 20090702
          Length = 598

 Score = 59.7 bits (143), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/51 (56%), Positives = 40/51 (78%), Gaps = 3/51 (5%)

Query: 3  EVESGSPKRTATTPYEEAMDALSSLITKRTRADKSNKGDRFDLLFDYLKVI 53
          E ++GSPK   ++PYEEA++ALSSLITKRTR    N  +RF +LF+YLK++
Sbjct: 4  EGDNGSPK---SSPYEEALEALSSLITKRTRVGDVNMEERFLVLFEYLKML 51


>IMGA|Medtr3g092210.1 Folylpolyglutamate synthetase
          chr03_pseudomolecule_IMGAG_V3 21627337-21618610 E
          EGN_Mt090430 20090702
          Length = 556

 Score = 59.7 bits (143), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/51 (56%), Positives = 40/51 (78%), Gaps = 3/51 (5%)

Query: 3  EVESGSPKRTATTPYEEAMDALSSLITKRTRADKSNKGDRFDLLFDYLKVI 53
          E ++GSPK   ++PYEEA++ALSSLITKRTR    N  +RF +LF+YLK++
Sbjct: 4  EGDNGSPK---SSPYEEALEALSSLITKRTRVGDVNMEERFLVLFEYLKML 51


>IMGA|Medtr3g092210.4 Folylpolyglutamate synthetase
          chr03_pseudomolecule_IMGAG_V3 21627337-21625756 E
          EGN_Mt090430 20090702
          Length = 109

 Score = 58.5 bits (140), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/51 (56%), Positives = 40/51 (78%), Gaps = 3/51 (5%)

Query: 3  EVESGSPKRTATTPYEEAMDALSSLITKRTRADKSNKGDRFDLLFDYLKVI 53
          E ++GSPK   ++PYEEA++ALSSLITKRTR    N  +RF +LF+YLK++
Sbjct: 4  EGDNGSPK---SSPYEEALEALSSLITKRTRVGDVNMEERFLVLFEYLKML 51