Jatropha Genome Database

JcCB0388281.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0388281.10 - phase: 0 /partial
         (115 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g043050.1 ATPase, E1-E2 type chr02_pseudomolecule_IMG...   150   1e-37
IMGA|Medtr2g043050.4 ATPase, E1-E2 type chr02_pseudomolecule_IMG...   150   2e-37
IMGA|Medtr2g043040.1 ATPase, E1-E2 type chr02_pseudomolecule_IMG...   149   2e-37
IMGA|Medtr4g118290.1 Haloacid dehalogenase-like hydrolase chr04_...    85   8e-18
IMGA|Medtr4g118140.1 Haloacid dehalogenase-like hydrolase chr04_...    85   8e-18
IMGA|Medtr8g015280.1 ATPase, E1-E2 type chr08_pseudomolecule_IMG...    85   1e-17
IMGA|Medtr5g015700.1 Cation transporting ATPase, C-terminal chr0...    82   6e-17
IMGA|Medtr8g101510.1 Cation transporting ATPase, C-terminal chr0...    77   2e-15
IMGA|Medtr7g135130.1 Cation transporting ATPase, C-terminal chr0...    59   5e-10

>IMGA|Medtr2g043050.1 ATPase, E1-E2 type
           chr02_pseudomolecule_IMGAG_V3 12236692-12249783 E
           EGN_Mt090430 20090702
          Length = 1093

 Score =  150 bits (379), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 69/113 (61%), Positives = 94/113 (83%)

Query: 3   GSGTTESLPTPKGDFGIEQDRLSTLTRDHKLDELERIGGVKGLSDLLKTNTEKGIHGDDA 62
           G+ T +  PT  G+F I  ++L++++R+H    L++ GGV G+S+LLKT+ EKGI+GDDA
Sbjct: 119 GTDTIKPPPTSTGEFPIGPEQLASISREHDTASLQQYGGVAGVSNLLKTDLEKGINGDDA 178

Query: 63  DLLKRKNAFGSNTYPQKKGRSFWMFLWEAWQDLTLIILMVAAVASLALGIKTE 115
           DLL+R+NAFGSN YP+KKGRSF+MF+W+A +DLTL+ILMVAA ASLALGIK+E
Sbjct: 179 DLLRRRNAFGSNNYPRKKGRSFFMFMWDACKDLTLVILMVAAAASLALGIKSE 231


>IMGA|Medtr2g043050.4 ATPase, E1-E2 type
           chr02_pseudomolecule_IMGAG_V3 12236692-12242036 E
           EGN_Mt090430 20090702
          Length = 405

 Score =  150 bits (378), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 69/113 (61%), Positives = 94/113 (83%)

Query: 3   GSGTTESLPTPKGDFGIEQDRLSTLTRDHKLDELERIGGVKGLSDLLKTNTEKGIHGDDA 62
           G+ T +  PT  G+F I  ++L++++R+H    L++ GGV G+S+LLKT+ EKGI+GDDA
Sbjct: 119 GTDTIKPPPTSTGEFPIGPEQLASISREHDTASLQQYGGVAGVSNLLKTDLEKGINGDDA 178

Query: 63  DLLKRKNAFGSNTYPQKKGRSFWMFLWEAWQDLTLIILMVAAVASLALGIKTE 115
           DLL+R+NAFGSN YP+KKGRSF+MF+W+A +DLTL+ILMVAA ASLALGIK+E
Sbjct: 179 DLLRRRNAFGSNNYPRKKGRSFFMFMWDACKDLTLVILMVAAAASLALGIKSE 231


>IMGA|Medtr2g043040.1 ATPase, E1-E2 type
           chr02_pseudomolecule_IMGAG_V3 12236692-12241856 E
           EGN_Mt090430 20090702
          Length = 412

 Score =  149 bits (377), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 69/113 (61%), Positives = 94/113 (83%)

Query: 3   GSGTTESLPTPKGDFGIEQDRLSTLTRDHKLDELERIGGVKGLSDLLKTNTEKGIHGDDA 62
           G+ T +  PT  G+F I  ++L++++R+H    L++ GGV G+S+LLKT+ EKGI+GDDA
Sbjct: 119 GTDTIKPPPTSTGEFPIGPEQLASISREHDTASLQQYGGVAGVSNLLKTDLEKGINGDDA 178

Query: 63  DLLKRKNAFGSNTYPQKKGRSFWMFLWEAWQDLTLIILMVAAVASLALGIKTE 115
           DLL+R+NAFGSN YP+KKGRSF+MF+W+A +DLTL+ILMVAA ASLALGIK+E
Sbjct: 179 DLLRRRNAFGSNNYPRKKGRSFFMFMWDACKDLTLVILMVAAAASLALGIKSE 231


>IMGA|Medtr4g118290.1 Haloacid dehalogenase-like hydrolase
           chr04_pseudomolecule_IMGAG_V3 27450089-27455125 H
           EGN_Mt090430 20090702
          Length = 904

 Score = 85.1 bits (209), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 40/99 (40%), Positives = 65/99 (65%), Gaps = 2/99 (2%)

Query: 17  FGIEQDRLSTLTRDHKLDELERIGGVKGLSDLLKTNTEKGIHGDDADLLKRKNAFGSNTY 76
           FGI  D L+++ R H    LE   GV+GL+  ++ + + G+    +D+  R++ +G N +
Sbjct: 46  FGIVPDELASIVRSHDTKCLEHHEGVEGLAKAVRVSFQGGV--SSSDVKHRQDIYGHNRH 103

Query: 77  PQKKGRSFWMFLWEAWQDLTLIILMVAAVASLALGIKTE 115
            +K  RSFWMF+W+A QDLTL+IL++ +V S+ +GI TE
Sbjct: 104 TEKPSRSFWMFVWDAMQDLTLVILILCSVVSIGVGILTE 142


>IMGA|Medtr4g118140.1 Haloacid dehalogenase-like hydrolase
           chr04_pseudomolecule_IMGAG_V3 27340344-27345386 H
           EGN_Mt090430 20090702
          Length = 870

 Score = 85.1 bits (209), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 40/99 (40%), Positives = 65/99 (65%), Gaps = 2/99 (2%)

Query: 17  FGIEQDRLSTLTRDHKLDELERIGGVKGLSDLLKTNTEKGIHGDDADLLKRKNAFGSNTY 76
           FGI  D L+++ R H    LE   GV+GL+  ++ + + G+    +D+  R++ +G N +
Sbjct: 46  FGIVPDELASIVRSHDTKCLEHHEGVEGLAKAVRVSFQGGV--SSSDVKHRQDIYGHNRH 103

Query: 77  PQKKGRSFWMFLWEAWQDLTLIILMVAAVASLALGIKTE 115
            +K  RSFWMF+W+A QDLTL+IL++ +V S+ +GI TE
Sbjct: 104 TEKPSRSFWMFVWDAMQDLTLVILILCSVVSIGVGILTE 142


>IMGA|Medtr8g015280.1 ATPase, E1-E2 type
           chr08_pseudomolecule_IMGAG_V3 2653378-2651996 H
           EGN_Mt090430 20090702
          Length = 446

 Score = 84.7 bits (208), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 48/113 (42%), Positives = 72/113 (63%), Gaps = 4/113 (3%)

Query: 4   SGTTESLPTPKGDFGIEQDRLSTLTRDHKLDELERIGGVKGLSDLLKTNTEKGI--HGDD 61
           S T   L +P   F I+Q+ L  + ++  +D L++ GGV+G++  LKTN E GI  H DD
Sbjct: 57  SFTVVDLSSPH-SFTIDQETLIDIVKEKSIDTLQKHGGVEGVASSLKTNVEFGIRSHDDD 115

Query: 62  -ADLLKRKNAFGSNTYPQKKGRSFWMFLWEAWQDLTLIILMVAAVASLALGIK 113
             D+  R+  FGSNTY +   +SF+ F+ EA++D+T++IL+V A  SL  GIK
Sbjct: 116 FHDISIRQQVFGSNTYKKPPSKSFFHFVVEAFKDVTILILLVCATLSLGFGIK 168


>IMGA|Medtr5g015700.1 Cation transporting ATPase, C-terminal
           chr05_pseudomolecule_IMGAG_V3 5279455-5284084 E
           EGN_Mt090430 20090702
          Length = 959

 Score = 82.0 bits (201), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 42/100 (42%), Positives = 66/100 (66%), Gaps = 2/100 (2%)

Query: 17  FGIEQDRLSTLTRDHKLDELERIGGVKGLSDLLKTNTEKGIHGDDADLL-KRKNAFGSNT 75
           F I  D L ++   H + +L+  G + G+++ L T+  +GI  +DADLL KR+  +G N 
Sbjct: 40  FQICGDELGSIVEGHDVKKLKYHGKIDGIAEKLSTSATEGI-SNDADLLDKRQQIYGINK 98

Query: 76  YPQKKGRSFWMFLWEAWQDLTLIILMVAAVASLALGIKTE 115
           + + + +SFW+F+WEA QD+TL+IL V A+ SL +GI TE
Sbjct: 99  FTESQAKSFWVFVWEALQDMTLMILGVCALVSLIVGIATE 138


>IMGA|Medtr8g101510.1 Cation transporting ATPase, C-terminal
           chr08_pseudomolecule_IMGAG_V3 22037135-22032188 E
           EGN_Mt090430 20090702
          Length = 1017

 Score = 77.0 bits (188), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/99 (37%), Positives = 62/99 (62%)

Query: 17  FGIEQDRLSTLTRDHKLDELERIGGVKGLSDLLKTNTEKGIHGDDADLLKRKNAFGSNTY 76
           F I  + L ++   H + +L+  GGV G+++ + T+T  G+ GD     +R+  FG N +
Sbjct: 100 FQICAEELGSIVEGHDVKKLKFHGGVDGIAEKISTSTTTGLGGDSESRHRRQELFGINKF 159

Query: 77  PQKKGRSFWMFLWEAWQDLTLIILMVAAVASLALGIKTE 115
            + + RSFW++++EA QD+TL+IL V A  SL +G+ TE
Sbjct: 160 AETELRSFWIYVYEALQDMTLMILGVCAFVSLIVGVLTE 198


>IMGA|Medtr7g135130.1 Cation transporting ATPase, C-terminal
           chr07_pseudomolecule_IMGAG_V3 32085774-32091028 E
           EGN_Mt090430 20090702
          Length = 1011

 Score = 59.3 bits (142), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 2/99 (2%)

Query: 17  FGIEQDRLSTLTRDHKLDELERIGGVKGLSDLLKTNTEKGIHGDDADLLKRKNAFGSNTY 76
           F I+ D +++L  ++  +  ++I GV+G++  L+ +   G+  D   L  R+  FG N Y
Sbjct: 49  FDIDPDSIASLVHNYDNNGFKKINGVEGIARKLRVSVAAGVREDS--LNTRQLYFGFNRY 106

Query: 77  PQKKGRSFWMFLWEAWQDLTLIILMVAAVASLALGIKTE 115
            +K  + F  F+WE+  D TLI LMV ++  +     TE
Sbjct: 107 AEKHAKPFLKFVWESMLDSTLIFLMVCSIVLIGGKFATE 145