Jatropha Genome Database

JcCB0387971.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0387971.20 + phase: 0 /partial
         (118 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g111020.1 Serine/threonine-specific protein phosphata...   188   4e-49
IMGA|Medtr4g067100.1 Serine/threonine-specific protein phosphata...   155   7e-39
IMGA|Medtr2g104850.1 DNA topoisomerase II; Serine/threonine-spec...   154   1e-38
IMGA|Medtr1g111240.1 Serine/threonine protein phosphatase BSL1 h...   131   9e-32

>IMGA|Medtr1g111020.1 Serine/threonine-specific protein phosphatase
           and bis(5-nucleosyl)-tetraphosphatase
           chr01_pseudomolecule_IMGAG_V3 23521636-23513053 E
           EGN_Mt090430 20090702
          Length = 687

 Score =  188 bits (478), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 86/110 (78%), Positives = 104/110 (94%), Gaps = 1/110 (0%)

Query: 4   DAYGLLMHRNGQWEWTLAPGVSPSPRYQHAAVFVGARLHVSGGALKGGRAVESEAAVAVL 63
           DAYGLLMHRNG WEWTLAPGVSPSPRYQHA+VFVGARLHV+GG L+GGRAVE E ++AVL
Sbjct: 79  DAYGLLMHRNGTWEWTLAPGVSPSPRYQHASVFVGARLHVTGGVLRGGRAVEGEPSIAVL 138

Query: 64  DTAAGVWLDKNGLVTSSKTSKGHTEHDPSLELMRRCRHASASVGVRIYVY 113
           DTAAGVWLD+NG+V+SS+++KGH ++D SLELMRRCRHA+A+VGV++Y+Y
Sbjct: 139 DTAAGVWLDRNGIVSSSRSNKGH-DYDHSLELMRRCRHAAAAVGVQVYIY 187


>IMGA|Medtr4g067100.1 Serine/threonine-specific protein phosphatase
           and bis(5-nucleosyl)-tetraphosphatase
           chr04_pseudomolecule_IMGAG_V3 12922861-12934391 E
           EGN_Mt090430 20090702
          Length = 873

 Score =  155 bits (391), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 77/120 (64%), Positives = 93/120 (77%), Gaps = 3/120 (2%)

Query: 2   LGDAYGLLMHRNGQWEWTLAPGVSPSPRYQHAAVFVGARLHVSGGALKGGRAVESEAAVA 61
           L  AYGL  HR+G+WEW +APGVSPS RYQHAAVFV ARLHVSGGAL GGR VE  ++VA
Sbjct: 177 LASAYGLAKHRDGRWEWAIAPGVSPSSRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVA 236

Query: 62  VLDTAAGVWLDKNGLVTSSKTSKGHTEH---DPSLELMRRCRHASASVGVRIYVYGGLRG 118
           VLDTAAGVW D   +VT+ +T +   +    D S+EL+RRCRHA+A+VG  I++YGGLRG
Sbjct: 237 VLDTAAGVWCDTKSVVTTPRTGRYSADAAGGDASVELVRRCRHAAAAVGDLIFIYGGLRG 296


>IMGA|Medtr2g104850.1 DNA topoisomerase II;
           Serine/threonine-specific protein phosphatase and
           bis(5-nucleosyl)-tetraphosphatase
           chr02_pseudomolecule_IMGAG_V3 24835580-24845823 E
           EGN_Mt090430 20090702
          Length = 995

 Score =  154 bits (388), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 78/120 (65%), Positives = 92/120 (76%), Gaps = 3/120 (2%)

Query: 2   LGDAYGLLMHRNGQWEWTLAPGVSPSPRYQHAAVFVGARLHVSGGALKGGRAVESEAAVA 61
           L  AYGL  HR+G+WEW +APGVSPSPRYQHAAVFV ARLHVSGGAL GGR VE  ++VA
Sbjct: 299 LASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVA 358

Query: 62  VLDTAAGVWLDKNGLVTSSKT---SKGHTEHDPSLELMRRCRHASASVGVRIYVYGGLRG 118
           VLDTAAGVW D   +VT+ +T   S      D ++EL RRCRHA+A+VG  I++YGGLRG
Sbjct: 359 VLDTAAGVWCDTKSVVTTPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRG 418


>IMGA|Medtr1g111240.1 Serine/threonine protein phosphatase BSL1
           homolog, putative chr01_pseudomolecule_IMGAG_V3
           23604293-23602479 E EGN_Mt090430 20090702
          Length = 99

 Score =  131 bits (329), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 62/84 (73%), Positives = 79/84 (94%), Gaps = 1/84 (1%)

Query: 35  VFVGARLHVSGGALKGGRAVESEAAVAVLDTAAGVWLDKNGLVTSSKTSKGHTEHDPSLE 94
           VFVGARLHV+GG L+GGRAVE E ++AVLDTAAGVWLD+NG+V+SS+++KGH ++D SLE
Sbjct: 2   VFVGARLHVTGGVLRGGRAVEGEPSIAVLDTAAGVWLDRNGIVSSSRSNKGH-DYDHSLE 60

Query: 95  LMRRCRHASASVGVRIYVYGGLRG 118
           LMRRCRHA+A+VGV++Y+YGGLRG
Sbjct: 61  LMRRCRHAAAAVGVQVYIYGGLRG 84