Jatropha Genome Database

JcCB0384191.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0384191.10 + phase: 0 /partial
         (180 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g122020.1 Aminotransferase, class I and II; ; chr04_p...   338   6e-94
IMGA|Medtr2g008560.1 Aminotransferase, class I and II; ; chr02_p...   249   4e-67
IMGA|Medtr1g114670.1 Aminotransferase, class I and II; ; chr01_p...    47   4e-06

>IMGA|Medtr4g122020.1 Aminotransferase, class I and II; ;
           chr04_pseudomolecule_IMGAG_V3 28801431-28796116 E
           EGN_Mt090430 20090702
          Length = 459

 Score =  338 bits (868), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 161/180 (89%), Positives = 171/180 (95%)

Query: 1   RSEALSTLEGYSGYGAEQGEKPLRAAIASTFYGDLGIQEDDIFVSDGAKCDISRLQILFG 60
           +S ALSTLEGYSGYGAEQGEKPLR+AIASTFY DLGI++DDIFVSDGAKCDISRLQI+FG
Sbjct: 114 KSHALSTLEGYSGYGAEQGEKPLRSAIASTFYPDLGIEDDDIFVSDGAKCDISRLQIVFG 173

Query: 61  SNVTMAVQDPSYPAYVDSSVIMGQTGLYQKDAEKYANIEYMRCSPENGFFPDLSKVSRTD 120
           SNV MAVQDPSYPAYVDSSVIMGQTGLYQKD +K+ANIEYMRC+PENGFFPDLS +SR D
Sbjct: 174 SNVKMAVQDPSYPAYVDSSVIMGQTGLYQKDVQKFANIEYMRCNPENGFFPDLSSLSRPD 233

Query: 121 IIFFCSPNNPTGSVATREQLVQLVQFAKDNGSIIVYDSAYAMYISDDKPRSIFEIPGAKE 180
           IIFFCSPNNPTG+ ATREQLVQLVQFAKDNGSIIVYDSAYAMYIS D PRSIFEIPGAKE
Sbjct: 234 IIFFCSPNNPTGAAATREQLVQLVQFAKDNGSIIVYDSAYAMYISGDNPRSIFEIPGAKE 293


>IMGA|Medtr2g008560.1 Aminotransferase, class I and II; ;
           chr02_pseudomolecule_IMGAG_V3 1650708-1654241 E
           EGN_Mt090430 20090702
          Length = 440

 Score =  249 bits (637), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 116/178 (65%), Positives = 136/178 (76%)

Query: 3   EALSTLEGYSGYGAEQGEKPLRAAIASTFYGDLGIQEDDIFVSDGAKCDISRLQILFGSN 62
             LST EGY GYG EQGEK LR AIA   Y DLGI+  ++FVSDGA+CDISRLQ+L G N
Sbjct: 97  HGLSTAEGYKGYGPEQGEKALRKAIAHKVYKDLGIKPSEVFVSDGAQCDISRLQLLMGPN 156

Query: 63  VTMAVQDPSYPAYVDSSVIMGQTGLYQKDAEKYANIEYMRCSPENGFFPDLSKVSRTDII 122
           + +AVQDPS+PAY+DSSVI+G  G +     KY NIEYM C P+  FFPDL   SR  +I
Sbjct: 157 LKIAVQDPSFPAYIDSSVIIGHAGKFVDRIGKYENIEYMTCGPQTDFFPDLHTTSRAQLI 216

Query: 123 FFCSPNNPTGSVATREQLVQLVQFAKDNGSIIVYDSAYAMYISDDKPRSIFEIPGAKE 180
           FFCSPNNPTG  ATR+QL QLV FAK NGSII+YDSAY+ YI+D  P+SI+EIPGA+E
Sbjct: 217 FFCSPNNPTGHAATRKQLQQLVDFAKVNGSIIIYDSAYSAYITDGSPKSIYEIPGARE 274


>IMGA|Medtr1g114670.1 Aminotransferase, class I and II; ;
           chr01_pseudomolecule_IMGAG_V3 24555679-24559510 E
           EGN_Mt090430 20090702
          Length = 417

 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 67/168 (39%), Gaps = 22/168 (13%)

Query: 11  YSGYGAEQGEKPLRAAIASTFYGDLG--IQEDDIFVSDGAK--CDISRLQILFGSNVTMA 66
           + GY    G    R AIA     DL   +  DD+F++ G     D+S + +L      + 
Sbjct: 75  FHGYAPTAGLLQARNAIAKYLSDDLPYELSSDDVFITCGCTQAIDVS-VALLSRPGANIL 133

Query: 67  VQDPSYPAYVDSSVIMGQTGLYQKDAEKYANIEYMRCSPENGFFPDLSKVS-----RTDI 121
           +  P +P Y   +            A +   + +    PE G+  DL  +       T  
Sbjct: 134 LPRPGFPIYELCA------------AFRQVEVRHYDLLPEKGWEVDLDAIETLVDQNTVA 181

Query: 122 IFFCSPNNPTGSVATREQLVQLVQFAKDNGSIIVYDSAYAMYISDDKP 169
           +   +P NP G+V T   L ++ + AK  G+I++ D  Y      D P
Sbjct: 182 LVIINPGNPCGNVYTYHHLEKIAETAKRLGTIVIADEVYGHLAFGDNP 229