Jatropha Genome Database

JcCB0381561.10

BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0381561.10 - phase: 0 /partial
         (163 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g104400.1 Biotin and thiamin synthesis associated chr...   244   2e-65

>IMGA|Medtr4g104400.1 Biotin and thiamin synthesis associated
           chr04_pseudomolecule_IMGAG_V3 22768987-22763639 F
           EGN_Mt090430 20090702
          Length = 377

 Score =  244 bits (622), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 113/163 (69%), Positives = 127/163 (77%), Gaps = 1/163 (0%)

Query: 1   MFSVRSIFRPQQLRXXXXXXXXXXXXXXXXXXXTQAERTIKEGPRNDWTRHEIKDVYDSP 60
           MF +R I R Q  R                    QAE+TI+ GPRNDWT+ E+K +YDSP
Sbjct: 1   MFWLRPILRSQS-RSSIWVLQHCNSFSTSSAAAIQAEKTIQNGPRNDWTKDEVKSIYDSP 59

Query: 61  LLDLLFHGAQVHRHAQNFREVQQCTLLSIKTGGCSEDCSYCPQSSRYKTGLKAQKLMTKD 120
           +LDLLFHGAQVHRHA NFREVQQCTLLS+KTGGCSEDCSYCPQSSRY TGLK QKL+ KD
Sbjct: 60  ILDLLFHGAQVHRHAHNFREVQQCTLLSVKTGGCSEDCSYCPQSSRYDTGLKGQKLLNKD 119

Query: 121 DVMEAAKRAKEAGSTRFCMGAAWRDTVGRNTNFNQILDYVKEI 163
            V++AA +AKEAGSTRFCMGAAWRDT+GR TNFNQIL+YVKEI
Sbjct: 120 AVLQAAVKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKEI 162