Jatropha Genome Database
- JcCB0380761.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0380761.10 + phase: 1 /partial
(409 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr5g094520.1 2Fe-2S ferredoxin, iron-sulfur binding site... 568 e-162
IMGA|Medtr5g094490.1 2Fe-2S ferredoxin, iron-sulfur binding site... 562 e-160
IMGA|Medtr2g117560.1 2Fe-2S ferredoxin, iron-sulfur binding site... 197 1e-50
>IMGA|Medtr5g094520.1 2Fe-2S ferredoxin, iron-sulfur binding site;
Xanthine dehydrogenase, small subunit; Carbon-monoxide
dehydrogenase, large subunit
chr05_pseudomolecule_IMGAG_V3 37404021-37397275 E
EGN_Mt090430 20090702
Length = 1320
Score = 568 bits (1465), Expect = e-162, Method: Compositional matrix adjust.
Identities = 272/379 (71%), Positives = 324/379 (85%)
Query: 31 QIKLGSQYYFYMENQTALAVPDEDNCMVVYSSNQAPEYAHTVIAKCLGVPEHNVRVLTRR 90
+IKLGSQYYFYME TALAVPDEDNC+ VY S+Q+PE+AH+ IA+CLG+PE+NVRV+TRR
Sbjct: 776 EIKLGSQYYFYMETHTALAVPDEDNCITVYLSSQSPEFAHSTIARCLGIPENNVRVITRR 835
Query: 91 VGGGFGGKALKAMPVATACALAAHKLQRPVRVYLNRHTDMIMVGGRHPMKITYSVGFKSN 150
VGGGFGGK +KA+ A +CALAA KLQR VR+YLNR TDMIM GGRHPMKITYSVGFK+N
Sbjct: 836 VGGGFGGKGMKAIAGAVSCALAAQKLQRAVRMYLNRKTDMIMAGGRHPMKITYSVGFKNN 895
Query: 151 GKITALKLDILINAGISIDVSPVMPKAIVSALKKYDWGALSFDIKVCKTNVVSKSAMRAP 210
GKITAL L+IL+NAGI DVS +MP+ I ALKKYDWGALS DIK+C+TN S+SA+R P
Sbjct: 896 GKITALDLEILVNAGIYPDVSAIMPRKIAGALKKYDWGALSLDIKLCRTNHPSRSALRGP 955
Query: 211 GDVQGSYIAEAIIENVAAFLFISSDSVRAINLHTYNTLKLYYDLSAGEPLEYTLTSIWNK 270
GD QGS+IAE IIENVAA L + DSVR+INLHTY +LK +YD S GEPLEYT+ IWNK
Sbjct: 956 GDTQGSFIAEGIIENVAATLSMEVDSVRSINLHTYTSLKKFYDDSCGEPLEYTMPLIWNK 1015
Query: 271 LATSSSFEQRTELIKEFNRSNVWKKRGISRIPVVYEVGTRPTAGKVSILNDGSIVVEVGG 330
LA S+++E R + +KEFNR N+WKK+GISRIPV++E+ RPT GKVSIL+DGS+VVEVGG
Sbjct: 1016 LAVSANYEPRVDKVKEFNRLNIWKKKGISRIPVLFELSLRPTPGKVSILSDGSVVVEVGG 1075
Query: 331 LEIGQGLWTKVKQMVAFALSSIKCDGAGDLLDKVRVIQSDTLSLTQGGMTAGSTTSESSC 390
+E+GQGLWTKVKQM AFAL +I+C+G LLDKVRV+QSDTLS+ QGG+TAGSTTSE+SC
Sbjct: 1076 IEMGQGLWTKVKQMAAFALGTIQCNGTESLLDKVRVVQSDTLSMIQGGLTAGSTTSEASC 1135
Query: 391 EAVRLCCNVLVERLMAVKE 409
AVRL CN LVERL +K+
Sbjct: 1136 AAVRLSCNTLVERLQPIKK 1154
>IMGA|Medtr5g094490.1 2Fe-2S ferredoxin, iron-sulfur binding site;
Xanthine dehydrogenase, small subunit; Carbon-monoxide
dehydrogenase, large subunit
chr05_pseudomolecule_IMGAG_V3 37388580-37380627 H
EGN_Mt090430 20090702
Length = 1356
Score = 562 bits (1448), Expect = e-160, Method: Compositional matrix adjust.
Identities = 267/412 (64%), Positives = 328/412 (79%), Gaps = 29/412 (7%)
Query: 12 REWLKQIPRFYLPRLNYDI--------------QIKLGSQYYFYMENQTALAVPDEDNCM 57
R ++P F P+ DI ++KLGSQYYFY+E QTALAVPDEDNC+
Sbjct: 743 RSSFFEVPPFLYPKHVGDISKGMAEADRKILSAEMKLGSQYYFYLETQTALAVPDEDNCI 802
Query: 58 VVYSSNQAPEYAHTVIAKCLGVPEHNVRVLTRRVGGGFGGKALKAMPVATACALAAHKLQ 117
VYSS+Q PE+ H+ IA+CLG+PE NVRV+TRRVGGGFGGKA+K++ ATACALAA KL
Sbjct: 803 TVYSSSQCPEFTHSTIARCLGIPESNVRVITRRVGGGFGGKAIKSISTATACALAAQKLC 862
Query: 118 RPVRVYLNRHTDMIMVGGRHPMKITYSVGFKSNGKITALKLDILINAGISIDVSPVMPKA 177
RPVR+YLNR TDMIM GGRHPMKITYSVGFK++GKITAL+L+ILINAGI +D+S +P +
Sbjct: 863 RPVRMYLNRKTDMIMAGGRHPMKITYSVGFKNDGKITALELEILINAGIYVDISAALPLS 922
Query: 178 IVSALKKYDWGALSFDIKVCKTNVVSKSAMRAPGDVQGSYIAEAIIENVAAFLFISSDSV 237
IV LKKYDWGALSFDIKVC+TN+ S+SAMR PG++QGS+IAE I+ENVAA L + DSV
Sbjct: 923 IVGGLKKYDWGALSFDIKVCRTNLPSRSAMRGPGELQGSFIAEGIVENVAATLSMDVDSV 982
Query: 238 RAINLHTYNTLKLYYDLSAGEPLEYTLTSIWNKLATSSSFEQRTELIKEFNRSNVWKKRG 297
R+INLHT+ +L+ +Y+ S+GEP EYTL SIW+KLA ++++EQR +++KEFNR + WKK+G
Sbjct: 983 RSINLHTHTSLQSFYEHSSGEPFEYTLPSIWSKLAVAANYEQRIKMVKEFNRISTWKKKG 1042
Query: 298 ISRIPVVYEVGTRPTAGKVSILNDGSIVVEVGGLEIGQGLWTKVKQMVAFALSSIKCDGA 357
ISRIPVV ++ RPT GKVSIL+DGS+VVEVGG+EIGQGLWTKVKQM AFA
Sbjct: 1043 ISRIPVVIQLTLRPTPGKVSILSDGSVVVEVGGIEIGQGLWTKVKQMAAFA--------- 1093
Query: 358 GDLLDKVRVIQSDTLSLTQGGMTAGSTTSESSCEAVRLCCNVLVERLMAVKE 409
RV+Q+DT+SL QGG TAGSTTSE+SCEAVRL CN+LVERL +KE
Sbjct: 1094 ------PRVVQADTVSLIQGGFTAGSTTSEASCEAVRLSCNILVERLKPLKE 1139
>IMGA|Medtr2g117560.1 2Fe-2S ferredoxin, iron-sulfur binding site;
Xanthine dehydrogenase, small subunit; Carbon-monoxide
dehydrogenase, large subunit
chr02_pseudomolecule_IMGAG_V3 27646570-27659065 E
EGN_Mt090430 20090702
Length = 1358
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 115/328 (35%), Positives = 185/328 (56%), Gaps = 13/328 (3%)
Query: 31 QIKLGSQYYFYMENQTALA-VPDEDNCMVVYSSNQAPEYAHTVIAKCLGVPEHNVRVLTR 89
++++G Q +FY+E +L D N + + SS QAP+ I+ LG+P V T+
Sbjct: 759 EVQIGGQEHFYLEPHGSLVWTVDGGNEVHMISSTQAPQKHQKYISHVLGLPMSKVVCKTK 818
Query: 90 RVGGGFGGKALKAMPVATACALAAHKLQRPVRVYLNRHTDMIMVGGRHPMKITYSVGFKS 149
R+GGGFGGK ++ +A A ++ ++ L RPV++ L+R DM++ G RH Y VGF +
Sbjct: 819 RIGGGFGGKETRSAFIAAAVSVPSYLLNRPVKIILDRDVDMMITGQRHSFLGKYKVGFTN 878
Query: 150 NGKITALKLDILINAGISIDVS-PVMPKAIVSALKKYDWGALSFDIKVCKTNVVSKSAMR 208
GK+ AL L+I NAG S+D+S ++ +A+ + Y+ + +VC TN S +A R
Sbjct: 879 EGKVLALDLEIYNNAGNSLDLSLAILERAMFHSDNVYEIPNVRITGRVCFTNFPSNTAFR 938
Query: 209 APGDVQGSYIAEAIIENVAAFLFISSDSVRAINLHTYNTLKLYYDLSAGEPLEYT-LTSI 267
G QG I E I+ +A L +S + ++ IN ++ L+Y G+ LE+ L+ +
Sbjct: 939 GFGGPQGMLITENWIQRIAVELDMSPEVIKEINFQGEGSI-LHY----GQILEHCPLSQL 993
Query: 268 WNKLATSSSFEQRTELIKEFNRSNVWKKRGISRIPVVYEVG-----TRPTAGKVSILNDG 322
WN+L S F + E + +FN N W+KRGI+ IP + + V++ DG
Sbjct: 994 WNELKLSCDFVKTREEVDKFNAHNRWRKRGIAMIPTKFGISFTTKFMNQAGALVNVYTDG 1053
Query: 323 SIVVEVGGLEIGQGLWTKVKQMVAFALS 350
+++V GG+E+GQGL TKV Q+ A A +
Sbjct: 1054 TVLVTHGGVEMGQGLHTKVAQIAASAFN 1081