Jatropha Genome Database

JcCB0374481.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0374481.10 - phase: 0 /partial
         (146 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g083950.2 CBS chr05_pseudomolecule_IMGAG_V3 31909635-...   246   3e-66
IMGA|Medtr5g083950.1 CBS chr05_pseudomolecule_IMGAG_V3 31909635-...   245   5e-66
IMGA|Medtr5g083950.3 CBS chr05_pseudomolecule_IMGAG_V3 31909635-...   191   9e-50
IMGA|Medtr5g083850.2 CBS chr05_pseudomolecule_IMGAG_V3 31872152-...   102   7e-23
IMGA|Medtr5g083850.1 CBS chr05_pseudomolecule_IMGAG_V3 31872596-...   100   2e-22
IMGA|Medtr5g083850.3 CBS chr05_pseudomolecule_IMGAG_V3 31872152-...    99   6e-22
IMGA|Medtr3g142510.1 Octicosapeptide/Phox/Bem1p; CBS chr03_pseud...    56   5e-09
IMGA|Medtr3g150700.1 Octicosapeptide/Phox/Bem1p; CBS chr03_pseud...    53   5e-08
IMGA|Medtr4g144000.1 Octicosapeptide/Phox/Bem1p; CBS chr04_pseud...    53   6e-08

>IMGA|Medtr5g083950.2 CBS chr05_pseudomolecule_IMGAG_V3
           31909635-31905429 E EGN_Mt090430 20090702
          Length = 243

 Score =  246 bits (629), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 121/146 (82%), Positives = 127/146 (86%)

Query: 1   LKAKGKGADGSWLWCTTDDTVYDAVKSMTHHNVGALVVVKPGEQKSLAGIITERDYLRKI 60
           LK KGKGADGSWLWCTTDDTVYDAVKSMT +NVGALVVVKPGE+KS+AGIITERDYLRKI
Sbjct: 98  LKGKGKGADGSWLWCTTDDTVYDAVKSMTQNNVGALVVVKPGEEKSIAGIITERDYLRKI 157

Query: 61  IVQGRSSKSTKVGDIMTEENKLITVTPNTKVLQAMQLMTDNRIRHIPVINDKEMIGMVSI 120
           IVQGRSSKSTKVGDIMTEENKLITVTP+TKVL+AMQLMTDNRIRHIPVINDK M+GMVSI
Sbjct: 158 IVQGRSSKSTKVGDIMTEENKLITVTPDTKVLRAMQLMTDNRIRHIPVINDKGMLGMVSI 217

Query: 121 GDXXXXXXXXXXXXXXXXNAYIQGGY 146
           GD                NAYIQGGY
Sbjct: 218 GDVVRAVVGEHRQELDRLNAYIQGGY 243


>IMGA|Medtr5g083950.1 CBS chr05_pseudomolecule_IMGAG_V3
           31909635-31905429 E EGN_Mt090430 20090702
          Length = 244

 Score =  245 bits (626), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 121/146 (82%), Positives = 127/146 (86%)

Query: 1   LKAKGKGADGSWLWCTTDDTVYDAVKSMTHHNVGALVVVKPGEQKSLAGIITERDYLRKI 60
           LK KGKGADGSWLWCTTDDTVYDAVKSMT +NVGALVVVKPGE+KS+AGIITERDYLRKI
Sbjct: 99  LKGKGKGADGSWLWCTTDDTVYDAVKSMTQNNVGALVVVKPGEEKSIAGIITERDYLRKI 158

Query: 61  IVQGRSSKSTKVGDIMTEENKLITVTPNTKVLQAMQLMTDNRIRHIPVINDKEMIGMVSI 120
           IVQGRSSKSTKVGDIMTEENKLITVTP+TKVL+AMQLMTDNRIRHIPVINDK M+GMVSI
Sbjct: 159 IVQGRSSKSTKVGDIMTEENKLITVTPDTKVLRAMQLMTDNRIRHIPVINDKGMLGMVSI 218

Query: 121 GDXXXXXXXXXXXXXXXXNAYIQGGY 146
           GD                NAYIQGGY
Sbjct: 219 GDVVRAVVGEHRQELDRLNAYIQGGY 244


>IMGA|Medtr5g083950.3 CBS chr05_pseudomolecule_IMGAG_V3
           31909635-31905429 E EGN_Mt090430 20090702
          Length = 206

 Score =  191 bits (486), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 92/99 (92%), Positives = 97/99 (97%)

Query: 1   LKAKGKGADGSWLWCTTDDTVYDAVKSMTHHNVGALVVVKPGEQKSLAGIITERDYLRKI 60
           LK KGKGADGSWLWCTTDDTVYDAVKSMT +NVGALVVVKPGE+KS+AGIITERDYLRKI
Sbjct: 98  LKGKGKGADGSWLWCTTDDTVYDAVKSMTQNNVGALVVVKPGEEKSIAGIITERDYLRKI 157

Query: 61  IVQGRSSKSTKVGDIMTEENKLITVTPNTKVLQAMQLMT 99
           IVQGRSSKSTKVGDIMTEENKLITVTP+TKVL+AMQLMT
Sbjct: 158 IVQGRSSKSTKVGDIMTEENKLITVTPDTKVLRAMQLMT 196


>IMGA|Medtr5g083850.2 CBS chr05_pseudomolecule_IMGAG_V3
           31872152-31868024 E EGN_Mt090430 20090702
          Length = 530

 Score =  102 bits (254), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 47/55 (85%), Positives = 51/55 (92%)

Query: 1   LKAKGKGADGSWLWCTTDDTVYDAVKSMTHHNVGALVVVKPGEQKSLAGIITERD 55
           L+ KGKGADGS LWCTTDDTVYDAVKSMT +N GALVVVKPGE+KS+AGIITERD
Sbjct: 60  LQGKGKGADGSRLWCTTDDTVYDAVKSMTQNNAGALVVVKPGEEKSIAGIITERD 114


>IMGA|Medtr5g083850.1 CBS chr05_pseudomolecule_IMGAG_V3
           31872596-31868024 E EGN_Mt090430 20090702
          Length = 628

 Score =  100 bits (250), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 46/54 (85%), Positives = 50/54 (92%)

Query: 1   LKAKGKGADGSWLWCTTDDTVYDAVKSMTHHNVGALVVVKPGEQKSLAGIITER 54
           L+ KGKGADGS LWCTTDDTVYDAVKSMT +N GALVVVKPGE+KS+AGIITER
Sbjct: 100 LQGKGKGADGSRLWCTTDDTVYDAVKSMTQNNAGALVVVKPGEEKSIAGIITER 153


>IMGA|Medtr5g083850.3 CBS chr05_pseudomolecule_IMGAG_V3
          31872152-31869662 E EGN_Mt090430 20090702
          Length = 91

 Score = 99.4 bits (246), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 46/54 (85%), Positives = 50/54 (92%)

Query: 1  LKAKGKGADGSWLWCTTDDTVYDAVKSMTHHNVGALVVVKPGEQKSLAGIITER 54
          L+ KGKGADGS LWCTTDDTVYDAVKSMT +N GALVVVKPGE+KS+AGIITER
Sbjct: 36 LQGKGKGADGSRLWCTTDDTVYDAVKSMTQNNAGALVVVKPGEEKSIAGIITER 89


>IMGA|Medtr3g142510.1 Octicosapeptide/Phox/Bem1p; CBS
           chr03_pseudomolecule_IMGAG_V3 36543726-36536896 E
           EGN_Mt090430 20090702
          Length = 519

 Score = 56.2 bits (134), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 4/101 (3%)

Query: 20  TVYDAVKSMTHHNVGALVVVKPGEQKSLAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 79
           TV DA + M    V A+++        L+GI+T++D   +++ +G S   T V  +MT  
Sbjct: 54  TVTDACRRMAARRVDAVLLTD--SSALLSGILTDKDVATRVVAEGLSPDETHVSKVMTRN 111

Query: 80  NKLITVTPNTKVLQAMQLMTDNRIRHIPVINDKEMIGMVSI 120
              I VT +T  + A+Q M   + RH+PV+ + E+I ++ I
Sbjct: 112 P--IFVTSDTLAIDALQKMIQGKFRHLPVVENGEVIAILDI 150



 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 5/95 (5%)

Query: 16  TTDDTVYDAVKSMTHHNVGALVVVKPGEQKSLAGIITERDYLRKIIVQGRSSKSTKVGDI 75
           +  D V+ A K M    V + V+V    +  + GI+T +D L +++    S +ST V  +
Sbjct: 215 SASDPVHVAAKRMQELRVSSSVIVT---ENKIQGILTSKDILMRVMAPNLSPESTLVEKV 271

Query: 76  MTEENKLITVTPNTKVLQAMQLMTDNRIRHIPVIN 110
           MT   +  T+   T ++ A+ +M D +  H+PV++
Sbjct: 272 MTPNPQCATL--ETTIIDALHMMHDGKFLHLPVVD 304


>IMGA|Medtr3g150700.1 Octicosapeptide/Phox/Bem1p; CBS
           chr03_pseudomolecule_IMGAG_V3 39759172-39751273 E
           EGN_Mt090430 20090702
          Length = 528

 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 4/102 (3%)

Query: 20  TVYDAVKSMTHHNVGALVVVKPGEQKSLAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 79
           TVY+A + M    V AL++        L GI+T++D   K++ +  + + T V  +MT  
Sbjct: 57  TVYEACRRMAARRVDALLLTD--SNGLLCGILTDKDIATKVVAEEINPEDTPVSKVMTRN 114

Query: 80  NKLITVTPNTKVLQAMQLMTDNRIRHIPVINDKEMIGMVSIG 121
              + V   T  ++A+Q M   + RH+PV+ + E++ ++ I 
Sbjct: 115 P--VFVLSETLAVEALQKMVQGKFRHLPVVENGEVLALLDIA 154



 Score = 48.9 bits (115), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 5/92 (5%)

Query: 19  DTVYDAVKSMTHHNVGALVVVKPGEQKSLAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 78
           D++    K M   + G  VV   G+ +   GI+T RD L ++I Q     ST V  +MT 
Sbjct: 226 DSILKTTKKMVELHAGCAVVTVDGKPR---GIVTSRDILMRVIAQNLPPASTHVEKVMTP 282

Query: 79  ENKLITVTPNTKVLQAMQLMTDNRIRHIPVIN 110
             + + +  +T ++ A+  M D +  H+PV++
Sbjct: 283 NPECVII--DTPIVDALHTMHDGKFLHLPVVD 312


>IMGA|Medtr4g144000.1 Octicosapeptide/Phox/Bem1p; CBS
           chr04_pseudomolecule_IMGAG_V3 36108463-36117248 E
           EGN_Mt090430 20090702
          Length = 534

 Score = 52.8 bits (125), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 4/101 (3%)

Query: 20  TVYDAVKSMTHHNVGALVVVKPGEQKSLAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 79
           +V DA + M    V A+++        L+GI+T++D   ++I +G     T V  +MT  
Sbjct: 65  SVSDACRRMAARRVDAVLLTDA--NALLSGIMTDKDIATRVIAEGLRPDQTMVAKVMTR- 121

Query: 80  NKLITVTPNTKVLQAMQLMTDNRIRHIPVINDKEMIGMVSI 120
           N L  VT +T  + A+Q M   + RH+PV+ + E+I ++ I
Sbjct: 122 NPLF-VTSDTLAIDALQKMVQGKFRHLPVVENGEVIAILDI 161



 Score = 49.3 bits (116), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 3/92 (3%)

Query: 19  DTVYDAVKSMTHHNVGALVVVKPGEQKSLAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 78
           D VY A K M    V + V+V     K + GI+T +D L +++ Q  S + T V  +MT 
Sbjct: 233 DPVYVAAKKMRELRVNSAVIVSLSGTK-IQGILTSKDILMRVVAQNLSPELTLVEKVMTP 291

Query: 79  ENKLITVTPNTKVLQAMQLMTDNRIRHIPVIN 110
                T+  +T +L A+ +M D +  H+PV++
Sbjct: 292 NPDCATL--DTTILDALHMMHDGKFLHLPVVD 321