Jatropha Genome Database

JcCB0372411.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0372411.10 + phase: 0 /pseudo/partial
         (170 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g014750.2 Urease, gamma/beta/alpha type chr02_pseudom...   217   3e-57
IMGA|Medtr2g014750.1 Dihydroorotase region chr02_pseudomolecule_...   216   3e-57
IMGA|Medtr2g014750.3 Metallo-dependent hydrolase, composite chr0...   216   4e-57
IMGA|Medtr2g014750.4 Metallo-dependent hydrolase, composite chr0...   185   9e-48

>IMGA|Medtr2g014750.2 Urease, gamma/beta/alpha type
           chr02_pseudomolecule_IMGAG_V3 3875358-3865685 E
           EGN_Mt090430 20090702
          Length = 537

 Score =  217 bits (552), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 103/149 (69%), Positives = 124/149 (83%), Gaps = 1/149 (0%)

Query: 18  YQEIQQDSENYTE-DAENDPRHYSTYLKTRPPSWEEAAIRDLVTLSKDTRIGGPAEGAHL 76
           + EIQQDSE+ +E +   DP  Y TYL TRPPSWEEAAI++LV  +KDTRIGG  EGAH+
Sbjct: 310 HSEIQQDSESSSELEGNGDPHSYKTYLDTRPPSWEEAAIKELVDATKDTRIGGSLEGAHV 369

Query: 77  HIVHLSDSGSSLQLIKLAKRSGDSVTVETCPHYLAFSAEEIKDGDTRFKCAPPIRDSANK 136
           HIVHLSDS +SL LIK AKR GDS+++ETCPHYL FS+EEI D DTR+KC+PPIRD++N+
Sbjct: 370 HIVHLSDSSASLDLIKEAKRRGDSISIETCPHYLTFSSEEIPDKDTRYKCSPPIRDASNR 429

Query: 137 EALWKALLGGDIDMLSSDHSPTVPELKLF 165
           E LW+ALL G ID+LSSDHSPTVP+LKL 
Sbjct: 430 EKLWEALLDGHIDLLSSDHSPTVPKLKLL 458


>IMGA|Medtr2g014750.1 Dihydroorotase region
           chr02_pseudomolecule_IMGAG_V3 3875358-3865685 E
           EGN_Mt090430 20090702
          Length = 586

 Score =  216 bits (551), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 103/150 (68%), Positives = 124/150 (82%), Gaps = 1/150 (0%)

Query: 18  YQEIQQDSENYTE-DAENDPRHYSTYLKTRPPSWEEAAIRDLVTLSKDTRIGGPAEGAHL 76
           + EIQQDSE+ +E +   DP  Y TYL TRPPSWEEAAI++LV  +KDTRIGG  EGAH+
Sbjct: 310 HSEIQQDSESSSELEGNGDPHSYKTYLDTRPPSWEEAAIKELVDATKDTRIGGSLEGAHV 369

Query: 77  HIVHLSDSGSSLQLIKLAKRSGDSVTVETCPHYLAFSAEEIKDGDTRFKCAPPIRDSANK 136
           HIVHLSDS +SL LIK AKR GDS+++ETCPHYL FS+EEI D DTR+KC+PPIRD++N+
Sbjct: 370 HIVHLSDSSASLDLIKEAKRRGDSISIETCPHYLTFSSEEIPDKDTRYKCSPPIRDASNR 429

Query: 137 EALWKALLGGDIDMLSSDHSPTVPELKLFN 166
           E LW+ALL G ID+LSSDHSPTVP+LKL  
Sbjct: 430 EKLWEALLDGHIDLLSSDHSPTVPKLKLLK 459


>IMGA|Medtr2g014750.3 Metallo-dependent hydrolase, composite
           chr02_pseudomolecule_IMGAG_V3 3872068-3865685 E
           EGN_Mt090430 20090702
          Length = 504

 Score =  216 bits (550), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 103/150 (68%), Positives = 124/150 (82%), Gaps = 1/150 (0%)

Query: 18  YQEIQQDSENYTE-DAENDPRHYSTYLKTRPPSWEEAAIRDLVTLSKDTRIGGPAEGAHL 76
           + EIQQDSE+ +E +   DP  Y TYL TRPPSWEEAAI++LV  +KDTRIGG  EGAH+
Sbjct: 228 HSEIQQDSESSSELEGNGDPHSYKTYLDTRPPSWEEAAIKELVDATKDTRIGGSLEGAHV 287

Query: 77  HIVHLSDSGSSLQLIKLAKRSGDSVTVETCPHYLAFSAEEIKDGDTRFKCAPPIRDSANK 136
           HIVHLSDS +SL LIK AKR GDS+++ETCPHYL FS+EEI D DTR+KC+PPIRD++N+
Sbjct: 288 HIVHLSDSSASLDLIKEAKRRGDSISIETCPHYLTFSSEEIPDKDTRYKCSPPIRDASNR 347

Query: 137 EALWKALLGGDIDMLSSDHSPTVPELKLFN 166
           E LW+ALL G ID+LSSDHSPTVP+LKL  
Sbjct: 348 EKLWEALLDGHIDLLSSDHSPTVPKLKLLK 377


>IMGA|Medtr2g014750.4 Metallo-dependent hydrolase, composite
           chr02_pseudomolecule_IMGAG_V3 3872068-3865685 E
           EGN_Mt090430 20090702
          Length = 387

 Score =  185 bits (470), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 87/128 (67%), Positives = 106/128 (82%), Gaps = 1/128 (0%)

Query: 18  YQEIQQDSENYTE-DAENDPRHYSTYLKTRPPSWEEAAIRDLVTLSKDTRIGGPAEGAHL 76
           + EIQQDSE+ +E +   DP  Y TYL TRPPSWEEAAI++LV  +KDTRIGG  EGAH+
Sbjct: 228 HSEIQQDSESSSELEGNGDPHSYKTYLDTRPPSWEEAAIKELVDATKDTRIGGSLEGAHV 287

Query: 77  HIVHLSDSGSSLQLIKLAKRSGDSVTVETCPHYLAFSAEEIKDGDTRFKCAPPIRDSANK 136
           HIVHLSDS +SL LIK AKR GDS+++ETCPHYL FS+EEI D DTR+KC+PPIRD++N+
Sbjct: 288 HIVHLSDSSASLDLIKEAKRRGDSISIETCPHYLTFSSEEIPDKDTRYKCSPPIRDASNR 347

Query: 137 EALWKALL 144
           E LW+ALL
Sbjct: 348 EKLWEALL 355