Jatropha Genome Database

JcCB0371021.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0371021.10 + phase: 0 
         (317 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g100600.1 Nicotianamine synthase chr01_pseudomolecule...   395   e-110
IMGA|Medtr2g038330.1 Nicotianamine synthase chr02_pseudomolecule...   371   e-103

>IMGA|Medtr1g100600.1 Nicotianamine synthase
           chr01_pseudomolecule_IMGAG_V3 20946388-20947585 E
           EGN_Mt090430 20090702
          Length = 341

 Score =  395 bits (1015), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 198/321 (61%), Positives = 252/321 (78%), Gaps = 19/321 (5%)

Query: 1   MGCQEQLVIEKVCEIYEKISGLESLTPSKNVNYLFTQLVHICIPQCQIDVTKLSEKVQEI 60
           M  +E L+IE+VC++Y++IS L++L P KNVN LFT+LV  C+P   IDVTKLS KVQEI
Sbjct: 34  MVGKEDLLIEEVCKLYDQISSLDTLKPCKNVNTLFTKLVLTCMPPSPIDVTKLSTKVQEI 93

Query: 61  RSELIKLCGQAEGLLESHFSTIIGSHENPLHHVRLFPYYSNYLKLSQLEFSMLSKNCTQI 120
           RS+LI+LCG+AEG LESH+STII S+ NPL+ + +FPYYSNYLKLS LEF++L+K+ T +
Sbjct: 94  RSKLIRLCGEAEGHLESHYSTIIASYNNPLNQLNIFPYYSNYLKLSLLEFNILTKHSTNV 153

Query: 121 PNHVAFVGSGPLPLTSIILATDHLRTTYFHNYDIDPSANSKALQLVSSDPNLSKRMFSHN 180
           P  +AF+GSGPLPLTS++LAT+HL+ T FHNYD DP ANSKA  LVSSDP LSKRMF + 
Sbjct: 154 PKKIAFIGSGPLPLTSLVLATNHLQNTIFHNYDFDPLANSKASCLVSSDPELSKRMFFYT 213

Query: 181 ADIMNVSSSLKEYEVIFLAALVGMDKEEKVQVINHLAEHMAPGAILLLRSAHGARAFMYP 240
            DI++VS++LKEYEV++LAALVGM  EEK ++I HLA++MAPGA+L+LRSAHGARAF+YP
Sbjct: 214 NDILDVSNALKEYEVVYLAALVGMSVEEKNRIIEHLAKYMAPGALLMLRSAHGARAFLYP 273

Query: 241 VVDPQDLQGFEVLSVFHPTDEVINSVIIARKFSRPIHSLNQGLSSALLSSKC--SDIQGF 298
           VVD  DL+GFEVLSVFHPTDEVINSV+IAR++              LL +KC   +IQ  
Sbjct: 274 VVDTNDLRGFEVLSVFHPTDEVINSVVIARRYPM-----------VLLPNKCCSDEIQAL 322

Query: 299 ----NHKTYSNIIGELTIDKQ 315
               NH   +N+I EL I++ 
Sbjct: 323 KPLINHG--NNMIEELVIEEN 341


>IMGA|Medtr2g038330.1 Nicotianamine synthase
           chr02_pseudomolecule_IMGAG_V3 10711186-10710338 H
           EGN_Mt090430 20090702
          Length = 282

 Score =  371 bits (952), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 176/273 (64%), Positives = 229/273 (83%), Gaps = 2/273 (0%)

Query: 1   MGCQEQLVIEKVCEIYEKISGLESLTPSKNVNYLFTQLVHICIPQC-QIDVTKLSEKVQE 59
           M  +++++IEKVC+IY+K+S L SL P   VN LFTQLV  C   C + D+T+LS++++E
Sbjct: 1   MDNRQEVIIEKVCKIYDKLSRLGSLNPPNQVNDLFTQLVTTCTTPCHEFDITQLSQEIKE 60

Query: 60  IRSELIKLCGQAEGLLESHFSTIIGSHENPLHHVRLFPYYSNYLKLSQLEFSMLSKNCTQ 119
             ++LI LCG+AEGLLESH+ST+IGS+ENPL+H+++FPYY NYLKL+ LEF+M +K+ TQ
Sbjct: 61  KIAKLITLCGKAEGLLESHYSTLIGSNENPLNHIKIFPYYKNYLKLTHLEFTMFTKHITQ 120

Query: 120 IPNHVAFVGSGPLPLTSIILATDHLRTTYFHNYDIDPSANSKALQLVSSDPNLSKRMFSH 179
           +P+ +AF+GSGPLPLTSIILAT +L  T FHN+DID  ANSKA  L+S D +LSKRM  H
Sbjct: 121 VPSKLAFIGSGPLPLTSIILATYYLTKTCFHNFDIDSLANSKAYDLISKDNDLSKRMLFH 180

Query: 180 NADIMNVSSSLKEYEVIFLAALVGMDKEEKVQVINHLAEHMAPGAILLLRSAHGARAFMY 239
            +DI++V + LKE+ V+FLAALVGMDK+EK +VINHLA++MAPGAIL+LRSAHGA+AF+Y
Sbjct: 181 TSDIVDVKNELKEFNVVFLAALVGMDKKEKAKVINHLAKYMAPGAILVLRSAHGAKAFLY 240

Query: 240 PVVDPQ-DLQGFEVLSVFHPTDEVINSVIIARK 271
            VVDP  DL+GFEVLS+FHPTDEVINSVI+ARK
Sbjct: 241 HVVDPSCDLKGFEVLSIFHPTDEVINSVIVARK 273