Jatropha Genome Database

JcCB0369881.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0369881.10 + phase: 0 /pseudo/partial
         (236 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g025540.1 Bacterial transketolase chr04_pseudomolecul...   436   e-123
IMGA|Medtr4g025540.2 Bacterial transketolase chr04_pseudomolecul...   436   e-123
IMGA|Medtr2g132820.1 Bacterial transketolase chr02_pseudomolecul...   434   e-122
IMGA|Medtr1g146450.1 Bacterial transketolase chr01_pseudomolecul...   434   e-122
IMGA|Medtr5g064820.1 Bacterial transketolase chr05_pseudomolecul...   434   e-122

>IMGA|Medtr4g025540.1 Bacterial transketolase
           chr04_pseudomolecule_IMGAG_V3 6118682-6113814 E
           EGN_Mt090430 20090702
          Length = 735

 Score =  436 bits (1121), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 207/235 (88%), Positives = 216/235 (91%), Gaps = 2/235 (0%)

Query: 2   EDLKNFRQWGSRTPGHPENFETPGVEVTTGPLGQGIANAVGLALAEKHLAARYNKPDNEI 61
           EDLK FRQW SRTPGHPENFETPG+EVTTGPLGQGIANAVGLALAEKHLAAR+NKPDNEI
Sbjct: 157 EDLKQFRQWESRTPGHPENFETPGIEVTTGPLGQGIANAVGLALAEKHLAARFNKPDNEI 216

Query: 62  VDHYTYVILGDGCQMEGIANEACSLAGHWGLGKLIAFYDDNHISIDGDTAIAFTESVDKR 121
           +DHYTY ILGDGCQMEGIANEACSLAGHWGLGKLIAFYDDNHISIDGDT IAFTESV+KR
Sbjct: 217 IDHYTYCILGDGCQMEGIANEACSLAGHWGLGKLIAFYDDNHISIDGDTEIAFTESVEKR 276

Query: 122 FEGLGWHVIWVKNGNTGYDEIRAAIKEAKAVKDKPTLIKVTTTIGYGSPNKANSYSVHGS 181
           FEGLGWHVIWVKNGNTG+DEIRAAIKEAKAVKD+PTLIK TTTIGYGSPNK+NSYSVHGS
Sbjct: 277 FEGLGWHVIWVKNGNTGFDEIRAAIKEAKAVKDRPTLIKFTTTIGYGSPNKSNSYSVHGS 336

Query: 182 ALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHVPRGCYRSKSRME*PKFAEYE 236
           ALGAKEVDATR NLGWPYEPFHVPEDVKKHWSRH+  G           KFA+YE
Sbjct: 337 ALGAKEVDATRNNLGWPYEPFHVPEDVKKHWSRHIREGAALESEWNA--KFADYE 389


>IMGA|Medtr4g025540.2 Bacterial transketolase
           chr04_pseudomolecule_IMGAG_V3 6117535-6113814 E
           EGN_Mt090430 20090702
          Length = 581

 Score =  436 bits (1120), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 207/235 (88%), Positives = 216/235 (91%), Gaps = 2/235 (0%)

Query: 2   EDLKNFRQWGSRTPGHPENFETPGVEVTTGPLGQGIANAVGLALAEKHLAARYNKPDNEI 61
           EDLK FRQW SRTPGHPENFETPG+EVTTGPLGQGIANAVGLALAEKHLAAR+NKPDNEI
Sbjct: 3   EDLKQFRQWESRTPGHPENFETPGIEVTTGPLGQGIANAVGLALAEKHLAARFNKPDNEI 62

Query: 62  VDHYTYVILGDGCQMEGIANEACSLAGHWGLGKLIAFYDDNHISIDGDTAIAFTESVDKR 121
           +DHYTY ILGDGCQMEGIANEACSLAGHWGLGKLIAFYDDNHISIDGDT IAFTESV+KR
Sbjct: 63  IDHYTYCILGDGCQMEGIANEACSLAGHWGLGKLIAFYDDNHISIDGDTEIAFTESVEKR 122

Query: 122 FEGLGWHVIWVKNGNTGYDEIRAAIKEAKAVKDKPTLIKVTTTIGYGSPNKANSYSVHGS 181
           FEGLGWHVIWVKNGNTG+DEIRAAIKEAKAVKD+PTLIK TTTIGYGSPNK+NSYSVHGS
Sbjct: 123 FEGLGWHVIWVKNGNTGFDEIRAAIKEAKAVKDRPTLIKFTTTIGYGSPNKSNSYSVHGS 182

Query: 182 ALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHVPRGCYRSKSRME*PKFAEYE 236
           ALGAKEVDATR NLGWPYEPFHVPEDVKKHWSRH+  G           KFA+YE
Sbjct: 183 ALGAKEVDATRNNLGWPYEPFHVPEDVKKHWSRHIREGAALESEWN--AKFADYE 235


>IMGA|Medtr2g132820.1 Bacterial transketolase
           chr02_pseudomolecule_IMGAG_V3 32363120-32367088 E
           EGN_Mt090430 20090702
          Length = 735

 Score =  434 bits (1117), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 206/236 (87%), Positives = 217/236 (91%), Gaps = 2/236 (0%)

Query: 1   EEDLKNFRQWGSRTPGHPENFETPGVEVTTGPLGQGIANAVGLALAEKHLAARYNKPDNE 60
           E+DLK FRQWGS+TPGHPENFET G+EVTTGPLGQGIAN VGLALAEKHLAAR+NKPD+E
Sbjct: 156 EDDLKQFRQWGSKTPGHPENFETYGIEVTTGPLGQGIANGVGLALAEKHLAARFNKPDSE 215

Query: 61  IVDHYTYVILGDGCQMEGIANEACSLAGHWGLGKLIAFYDDNHISIDGDTAIAFTESVDK 120
           IVDHYTYVILGDGCQMEGI+NEACSLAGHWGLGKLIAFYDDNHISIDGDT IAFTE+VD+
Sbjct: 216 IVDHYTYVILGDGCQMEGISNEACSLAGHWGLGKLIAFYDDNHISIDGDTEIAFTENVDQ 275

Query: 121 RFEGLGWHVIWVKNGNTGYDEIRAAIKEAKAVKDKPTLIKVTTTIGYGSPNKANSYSVHG 180
           RFE LGWHVIWVKNGNTGYDEIRAAIKEAKAV DKPTLIKVTTTIG+GSPNKANSYSVHG
Sbjct: 276 RFEALGWHVIWVKNGNTGYDEIRAAIKEAKAVTDKPTLIKVTTTIGFGSPNKANSYSVHG 335

Query: 181 SALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHVPRGCYRSKSRME*PKFAEYE 236
           +ALGAKEVDATR+NLGWPYEPFHVPEDVKKHWSRH P G           KFAEYE
Sbjct: 336 AALGAKEVDATRQNLGWPYEPFHVPEDVKKHWSRHTPEGAALEAEWNA--KFAEYE 389


>IMGA|Medtr1g146450.1 Bacterial transketolase
           chr01_pseudomolecule_IMGAG_V3 32373189-32377149 E
           EGN_Mt090430 20090702
          Length = 735

 Score =  434 bits (1117), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 206/236 (87%), Positives = 217/236 (91%), Gaps = 2/236 (0%)

Query: 1   EEDLKNFRQWGSRTPGHPENFETPGVEVTTGPLGQGIANAVGLALAEKHLAARYNKPDNE 60
           E+DLK FRQWGS+TPGHPENFET G+EVTTGPLGQGIAN VGLALAEKHLAAR+NKPD+E
Sbjct: 156 EDDLKQFRQWGSKTPGHPENFETYGIEVTTGPLGQGIANGVGLALAEKHLAARFNKPDSE 215

Query: 61  IVDHYTYVILGDGCQMEGIANEACSLAGHWGLGKLIAFYDDNHISIDGDTAIAFTESVDK 120
           IVDHYTYVILGDGCQMEGI+NEACSLAGHWGLGKLIAFYDDNHISIDGDT IAFTE+VD+
Sbjct: 216 IVDHYTYVILGDGCQMEGISNEACSLAGHWGLGKLIAFYDDNHISIDGDTEIAFTENVDQ 275

Query: 121 RFEGLGWHVIWVKNGNTGYDEIRAAIKEAKAVKDKPTLIKVTTTIGYGSPNKANSYSVHG 180
           RFE LGWHVIWVKNGNTGYDEIRAAIKEAKAV DKPTLIKVTTTIG+GSPNKANSYSVHG
Sbjct: 276 RFEALGWHVIWVKNGNTGYDEIRAAIKEAKAVTDKPTLIKVTTTIGFGSPNKANSYSVHG 335

Query: 181 SALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHVPRGCYRSKSRME*PKFAEYE 236
           +ALGAKEVDATR+NLGWPYEPFHVPEDVKKHWSRH P G           KFAEYE
Sbjct: 336 AALGAKEVDATRQNLGWPYEPFHVPEDVKKHWSRHTPEGAALEAEWNA--KFAEYE 389


>IMGA|Medtr5g064820.1 Bacterial transketolase
           chr05_pseudomolecule_IMGAG_V3 22539663-22543631 E
           EGN_Mt090430 20090702
          Length = 735

 Score =  434 bits (1117), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 206/236 (87%), Positives = 217/236 (91%), Gaps = 2/236 (0%)

Query: 1   EEDLKNFRQWGSRTPGHPENFETPGVEVTTGPLGQGIANAVGLALAEKHLAARYNKPDNE 60
           E+DLK FRQWGS+TPGHPENFET G+EVTTGPLGQGIAN VGLALAEKHLAAR+NKPD+E
Sbjct: 156 EDDLKQFRQWGSKTPGHPENFETYGIEVTTGPLGQGIANGVGLALAEKHLAARFNKPDSE 215

Query: 61  IVDHYTYVILGDGCQMEGIANEACSLAGHWGLGKLIAFYDDNHISIDGDTAIAFTESVDK 120
           IVDHYTYVILGDGCQMEGI+NEACSLAGHWGLGKLIAFYDDNHISIDGDT IAFTE+VD+
Sbjct: 216 IVDHYTYVILGDGCQMEGISNEACSLAGHWGLGKLIAFYDDNHISIDGDTEIAFTENVDQ 275

Query: 121 RFEGLGWHVIWVKNGNTGYDEIRAAIKEAKAVKDKPTLIKVTTTIGYGSPNKANSYSVHG 180
           RFE LGWHVIWVKNGNTGYDEIRAAIKEAKAV DKPTLIKVTTTIG+GSPNKANSYSVHG
Sbjct: 276 RFEALGWHVIWVKNGNTGYDEIRAAIKEAKAVTDKPTLIKVTTTIGFGSPNKANSYSVHG 335

Query: 181 SALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHVPRGCYRSKSRME*PKFAEYE 236
           +ALGAKEVDATR+NLGWPYEPFHVPEDVKKHWSRH P G           KFAEYE
Sbjct: 336 AALGAKEVDATRQNLGWPYEPFHVPEDVKKHWSRHTPEGAALEAEWNA--KFAEYE 389