Jatropha Genome Database

JcCB0367131.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0367131.10 - phase: 0 /pseudo/partial
         (374 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g128980.1 Kinesin, motor region; Kinesin-related chr0...   469   e-133
IMGA|Medtr8g134270.1 Peptidase S26A, signal peptidase I chr08_ps...   271   5e-73

>IMGA|Medtr4g128980.1 Kinesin, motor region; Kinesin-related
            chr04_pseudomolecule_IMGAG_V3 30552393-30537894 E
            EGN_Mt090430 20090702
          Length = 2748

 Score =  469 bits (1207), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 245/364 (67%), Positives = 288/364 (79%), Gaps = 24/364 (6%)

Query: 17   IAESRQTYSEEKEAEVKLLERSVEELECTINVLENKVDILKGXXXXXXXXXXXXXXXXHA 76
            +AE+R+ Y+E++EAE++LLERSVEELE T+NVLEN VD +KG                 A
Sbjct: 2230 LAEARKVYAEDREAEIELLERSVEELESTVNVLENNVDFIKGEAERQRLQREDLEMELCA 2289

Query: 77   INHQMQNVKSADSDMKRHLDEKEKGLEEALKHIQILERDIAEKDAEITKCKAHISELNLH 136
            +  QMQN+++AD D+KR LDEKEK LEEA  HIQ+L+ DIA KDAE+ + K HISELNLH
Sbjct: 2290 LKDQMQNLRNADDDIKRFLDEKEKCLEEAQNHIQVLKSDIAGKDAEVAQMKVHISELNLH 2349

Query: 137  AEAQASEYKQKFKALEAMAEQVKPEGHFSHIANSSSNKLEKNASKSRGSGSPFKCIGLGL 196
            AEAQA EYKQKFKALE MAEQVKPEG  +   N+ SNK EKNA+KSRGSGSPFKCIGLGL
Sbjct: 2350 AEAQAMEYKQKFKALEVMAEQVKPEGISTQPNNALSNKSEKNATKSRGSGSPFKCIGLGL 2409

Query: 197  AQQMKSEKDEELTAARLRIEELESLAAGRQKEVFALNARLAAAESMTHDVIRDLLGVKLD 256
            AQQ+K EK EEL+AARLRIEELES AA RQKE+F+LNARLAAAESMTHDVIRDLLGVKLD
Sbjct: 2410 AQQVKYEKVEELSAARLRIEELESQAACRQKEIFSLNARLAAAESMTHDVIRDLLGVKLD 2469

Query: 257  MTNYV-----------------------EKE-ELIKLKQQLNEFIEERRGWLEEIDRKQA 292
            MT+YV                       EKE E++KLK+QLNEFIEER+GWL++IDRKQA
Sbjct: 2470 MTSYVSLLDNHQGQKIAEKAQFLTLEPQEKEQEVMKLKKQLNEFIEERKGWLQDIDRKQA 2529

Query: 293  EMVAAQIALEKLHQRDQLLKAENDMLKMENVNNKKRLMELEGEVKKLSGQQNLQQRIHHH 352
            E+VAAQIALEKL QRDQLLK EN++L+MEN +NK ++ME+E E+ KLSGQQNLQQRIHHH
Sbjct: 2530 ELVAAQIALEKLRQRDQLLKTENELLRMENASNKSKIMEVEEEMNKLSGQQNLQQRIHHH 2589

Query: 353  AKVK 356
            AK+K
Sbjct: 2590 AKIK 2593


>IMGA|Medtr8g134270.1 Peptidase S26A, signal peptidase I
           chr08_pseudomolecule_IMGAG_V3 32264510-32258795 H
           EGN_Mt090430 20090702
          Length = 1032

 Score =  271 bits (692), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 166/374 (44%), Positives = 225/374 (60%), Gaps = 38/374 (10%)

Query: 18  AESRQTYSEEKEAEVKLLERSVEELECTINVLENKV--------------DILKGXXXXX 63
           +ES + ++E+KE EVK+LE SVEELE TINVLE KV              D LK      
Sbjct: 619 SESSKLFAEQKEEEVKILEHSVEELESTINVLEKKVYEMDEEVERHRSISDSLKVELQAL 678

Query: 64  XXXXXXXXXXXHAINHQMQNVKSADSDMKRHLDEKEKGLEEALKHIQILERDIAEKDAEI 123
                         + +  +V++ D    R L  K   L EA   I++LE + AEKD EI
Sbjct: 679 KERILLVENLPQNSDSESMSVQTGDKK-SRQLPSKVLELHEAQIQIKLLENENAEKDQEI 737

Query: 124 TKCKAHISELNLHAEAQASEYKQKFKALEAMAEQVKPEGHFSHIANSSSNKLEKNASKSR 183
            KCK +ISE+ LHAEAQ  +Y+QK+K LE+M  +VK +  +S     +  K+EK ++++R
Sbjct: 738 KKCKEYISEIVLHAEAQTLQYQQKYKCLESMFCEVKTDMSYSTSMAPTLEKMEKMSTRTR 797

Query: 184 GSGSPFKCIGLGLAQQMKSEKDEELTAARLRIEELESLAAGRQKEVFALNARLAAAESMT 243
           GSGSPF+CI   L QQM  EKD+EL+ ARLR++ELE+LAA RQKEV  L  RLAA ESMT
Sbjct: 798 GSGSPFRCIS-NLVQQMNQEKDQELSVARLRVQELEALAASRQKEVCMLQTRLAATESMT 856

Query: 244 HDVIRDLLGVKLDMTNYVEKEELIK---------------------LKQQLNEFIEERRG 282
           HDVIRDLLGVKLD+TNY  K +++K                     L+Q +N+ IEER  
Sbjct: 857 HDVIRDLLGVKLDITNYATKTKIVKLVEEAHHQREKFFAKEKENLDLRQHINDLIEERES 916

Query: 283 WLEEIDRKQAEMVAAQIALEKLHQRDQLLKAENDMLKMENVNNKKRLMELEGEVKKLSGQ 342
            +  +  K+A+M+A QIA++ L +RDQLL A+N MLKM+  N  +++ EL+  VK L G 
Sbjct: 917 CISNLRTKEADMLATQIAVQLLQERDQLLSAQNGMLKMDKTNLIRKIAELDDMVKTLVGT 976

Query: 343 QNLQQRIHHHAKVK 356
           +N  Q +   +K K
Sbjct: 977 RN-SQHVPQSSKTK 989