Jatropha Genome Database

JcCB0366431.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0366431.10 - phase: 0 
         (227 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g145370.1 Methyladenine glycosylase chr08_pseudomolec...   246   6e-66
IMGA|Medtr4g022060.1 Methyladenine glycosylase chr04_pseudomolec...   236   7e-63
IMGA|Medtr2g085500.1 Methyladenine glycosylase chr02_pseudomolec...   193   5e-50
IMGA|Medtr8g077310.1 Methyladenine glycosylase chr08_pseudomolec...   169   1e-42
IMGA|Medtr8g077120.1 Methyladenine glycosylase chr08_pseudomolec...   111   3e-25
IMGA|Medtr8g077130.1 Methyladenine glycosylase chr08_pseudomolec...    80   7e-16

>IMGA|Medtr8g145370.1 Methyladenine glycosylase
           chr08_pseudomolecule_IMGAG_V3 35323888-35319785 E
           EGN_Mt090430 20090702
          Length = 375

 Score =  246 bits (628), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 109/179 (60%), Positives = 137/179 (76%)

Query: 21  TDPLYMSFHDEEWGVPVHDDRKLFELLVFSQALAEMSWPAILHMRDIFRKLFDNFDPSSV 80
           T+P Y +FHDEEWGVPVHDD+KLFE+LV S AL+E++WPAIL  R IFR++F +FDP +V
Sbjct: 157 TEPYYATFHDEEWGVPVHDDKKLFEVLVLSSALSELTWPAILSKRHIFREVFADFDPVAV 216

Query: 81  AQFTEXXXXXXXXXXXXXXXEPKLRAIVENAKLLIKVQHEFGSFNNYCWRFVNHTPLRNG 140
           ++  E               + KLR I+ENA+ + KV  EFGSF+NY W FVNH P+ + 
Sbjct: 217 SKLNEKKVITPGTTASSLLSDQKLRGIIENARQISKVIVEFGSFDNYIWSFVNHKPILSK 276

Query: 141 FRYARQVPVKTPKAELISKDLMQRGFRCVGPTVVYSFMQVAGIVNDHLVTCFRYQECNA 199
           FRY RQVPVKTPKAE+ISKDL++RGFR VGPTV+YSFMQV G+ NDHL++CFR+QEC A
Sbjct: 277 FRYPRQVPVKTPKAEVISKDLVRRGFRGVGPTVIYSFMQVVGLTNDHLISCFRFQECVA 335


>IMGA|Medtr4g022060.1 Methyladenine glycosylase
           chr04_pseudomolecule_IMGAG_V3 4367070-4369083 E
           EGN_Mt090430 20090702
          Length = 235

 Score =  236 bits (602), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 110/215 (51%), Positives = 150/215 (69%), Gaps = 3/215 (1%)

Query: 10  FTVGSLICFFKTDPLYMSFHDEEWGVPVHDDRKLFELLVFSQALAEMSWPAILHMRDIFR 69
           F+V  L      +P Y++FHDEEWGVP+HDD+KLFELL FS ALAE+SWP IL  R +FR
Sbjct: 5   FSVSCLSFIACKEPCYIAFHDEEWGVPIHDDKKLFELLSFSGALAELSWPTILGKRQLFR 64

Query: 70  KLFDNFDPSSVAQFTEXXXXXXXXXXXXXXXEPKLRAIVENAKLLIKVQHEFGSFNNYCW 129
           K+F +FDP +V++  E               E +LR+I+ENA+ + KV  EFGSF++Y W
Sbjct: 65  KVFLDFDPCAVSRMNEKKIVAPGSPASSLLSELRLRSIIENARQMCKVIEEFGSFDSYIW 124

Query: 130 RFVNHTPLRNGFRYARQVPVKTPKAELISKDLMQRGFRCVGPTVVYSFMQVAGIVNDHLV 189
            FVN+ P+ + FRY RQVP K+PKAE ISKDL++RGFR VGPTV+Y+FMQVAG+ NDHL+
Sbjct: 125 NFVNNKPIVSQFRYPRQVPAKSPKAEFISKDLVKRGFRSVGPTVIYTFMQVAGLTNDHLI 184

Query: 190 TCFRYQECNANVKKNCSPKIEETEVVVTKALETTH 224
            CFR++EC   +  N   + +E+  + +K  E ++
Sbjct: 185 GCFRFKEC---IFSNAEAEGKESSSLNSKVKEKSN 216


>IMGA|Medtr2g085500.1 Methyladenine glycosylase
           chr02_pseudomolecule_IMGAG_V3 19275372-19271902 E
           EGN_Mt090430 20090702
          Length = 390

 Score =  193 bits (491), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 85/177 (48%), Positives = 117/177 (66%), Gaps = 2/177 (1%)

Query: 21  TDPLYMSFHDEEWGVPVHDDRKLFELLVFSQALAEMSWPAILHMRDIFRKLFDNFDPSSV 80
           +DP+Y+++HDEEWGVPVHDD+ LFELL+ S A     W + L  R  FR  F  FD   V
Sbjct: 210 SDPIYIAYHDEEWGVPVHDDKMLFELLILSGAQVGSDWTSTLKKRLDFRAAFSEFDAEIV 269

Query: 81  AQFTEXXXXXXXXXXXXXXXEPKLRAIVENAKLLIKVQHEFGSFNNYCWRFVNHTPLRNG 140
           A  T+                 K+R +V+NA  +++V+  FGSF+ Y W FVNH P+ N 
Sbjct: 270 ANLTDKQMMSISSEYGIDIS--KVRGVVDNANQILQVRKGFGSFDKYIWGFVNHKPISNQ 327

Query: 141 FRYARQVPVKTPKAELISKDLMQRGFRCVGPTVVYSFMQVAGIVNDHLVTCFRYQEC 197
           +++  ++PVKT K+E ISKD+++RGFR VGPTVV+SFMQ AG+ NDHL+TC R+ +C
Sbjct: 328 YKFGHKIPVKTSKSESISKDMIKRGFRYVGPTVVHSFMQAAGLTNDHLITCHRHLQC 384


>IMGA|Medtr8g077310.1 Methyladenine glycosylase
           chr08_pseudomolecule_IMGAG_V3 15389610-15393837 E
           EGN_Mt090430 20090702
          Length = 299

 Score =  169 bits (428), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 80/180 (44%), Positives = 113/180 (62%), Gaps = 19/180 (10%)

Query: 21  TDPLYMSFHDEEWGVPVHDDRKLFELLVFSQALAEMSWPAILHMRDIFRKLFDNFDPSSV 80
           +D LY+ FHDE WGVP +DD KLFE+L  S  L + +W  I+  R+  R++F  FDP +V
Sbjct: 125 SDKLYVEFHDECWGVPAYDDNKLFEMLAMSGLLMDYNWTEIIKRREPLREVFAGFDPYTV 184

Query: 81  AQFTEXXXXXXXXXXXXXXXEPKLRAIVENAKLLI---KVQHEFGSFNNYCWRFVNHTPL 137
           A+  E                 ++  I  N  L +   +V  E GSF++Y W FVNH P+
Sbjct: 185 AKMEEQ----------------EIIEITSNKALSLADSRVVRECGSFSSYIWSFVNHKPI 228

Query: 138 RNGFRYARQVPVKTPKAELISKDLMQRGFRCVGPTVVYSFMQVAGIVNDHLVTCFRYQEC 197
            N ++Y R VP+++PKAE +SKD+++RGFR VGP +V+SFMQ AG+  DHLV C+R+ EC
Sbjct: 229 INKYKYPRNVPLRSPKAEALSKDMVKRGFRFVGPVIVHSFMQAAGLTIDHLVDCYRHSEC 288


>IMGA|Medtr8g077120.1 Methyladenine glycosylase
           chr08_pseudomolecule_IMGAG_V3 15295351-15294621 E
           EGN_Mt090430 20090702
          Length = 108

 Score =  111 bits (278), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 46/82 (56%), Positives = 64/82 (78%)

Query: 116 KVQHEFGSFNNYCWRFVNHTPLRNGFRYARQVPVKTPKAELISKDLMQRGFRCVGPTVVY 175
           +V  E GSF++Y W FVNH P+ N ++Y R VP+++PKAE +SKD+++RGFR VGP +V+
Sbjct: 16  QVVRECGSFSSYIWSFVNHKPIINKYKYPRNVPLRSPKAEALSKDMVKRGFRFVGPVIVH 75

Query: 176 SFMQVAGIVNDHLVTCFRYQEC 197
           SFMQ AG+  DHLV C+R+ EC
Sbjct: 76  SFMQAAGLTIDHLVDCYRHSEC 97


>IMGA|Medtr8g077130.1 Methyladenine glycosylase
           chr08_pseudomolecule_IMGAG_V3 15298848-15295610 E
           EGN_Mt090430 20090702
          Length = 222

 Score = 80.5 bits (197), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 55/96 (57%)

Query: 21  TDPLYMSFHDEEWGVPVHDDRKLFELLVFSQALAEMSWPAILHMRDIFRKLFDNFDPSSV 80
           +D LY+ FHDE WGVP +DD KLFE+L  S  L + +W  I+  R+  R++F  FDP +V
Sbjct: 125 SDKLYVEFHDECWGVPAYDDNKLFEMLAMSGLLMDYNWTEIIKRREPLREVFAGFDPYTV 184

Query: 81  AQFTEXXXXXXXXXXXXXXXEPKLRAIVENAKLLIK 116
           A+  E               + ++  IV+NAK ++K
Sbjct: 185 AKMEEQEIIEITSNKALSLADSRVMCIVDNAKCIMK 220