Jatropha Genome Database

JcCB0361311.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0361311.10 + phase: 1 /TE/partial
         (252 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|AC233675_19.1 Protein of unknown function DUF1723 AC233675....    50   2e-06
IMGA|Medtr4g109330.1 IMP dehydrogenase/GMP reductase, putative c...    50   2e-06

>IMGA|AC233675_19.1 Protein of unknown function DUF1723 AC233675.1
           89417-86922 E EGN_Mt090430 20090702
          Length = 562

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 31/48 (64%)

Query: 36  ILVLMERWMDITHTFHLPFGEMTINPMDFVAIIGLPFGGRSIAFDEQL 83
           +L L ERW   T+TFH+P GEMT+   DF  +  LP  GR + +++++
Sbjct: 168 LLTLCERWHPETNTFHMPMGEMTVTLDDFACLTHLPIEGRMLDYEKKM 215


>IMGA|Medtr4g109330.1 IMP dehydrogenase/GMP reductase, putative
           chr04_pseudomolecule_IMGAG_V3 24432701-24430206 E
           EGN_Mt090430 20090702
          Length = 562

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 31/48 (64%)

Query: 36  ILVLMERWMDITHTFHLPFGEMTINPMDFVAIIGLPFGGRSIAFDEQL 83
           +L L ERW   T+TFH+P GEMT+   DF  +  LP  GR + +++++
Sbjct: 168 LLTLCERWHPETNTFHMPMGEMTVTLDDFACLTHLPIEGRMLDYEKKM 215