Jatropha Genome Database

JcCB0357671.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0357671.10 + phase: 0 /pseudo/partial
         (244 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g159520.1 Protein of unknown function UPF0044 chr04_p...   360   e-100
IMGA|Medtr7g083490.1 Protein of unknown function UPF0044 chr07_p...   215   2e-56
IMGA|Medtr1g089760.1 Protein of unknown function UPF0044 chr01_p...    58   3e-09
IMGA|Medtr6g008920.1 Protein of unknown function UPF0044 chr06_p...    56   2e-08
IMGA|Medtr6g009130.1 Protein of unknown function UPF0044 chr06_p...    54   7e-08
IMGA|Medtr8g077280.1 Protein of unknown function UPF0044 chr08_p...    54   8e-08
IMGA|Medtr8g077160.1 Protein of unknown function UPF0044 chr08_p...    53   1e-07
IMGA|Medtr1g068460.1 Protein of unknown function UPF0044 chr01_p...    52   2e-07
IMGA|Medtr1g068790.1 Protein of unknown function UPF0044 chr01_p...    51   6e-07
IMGA|Medtr4g158080.1 Protein of unknown function UPF0044 chr04_p...    50   9e-07
IMGA|Medtr4g157690.1 Protein of unknown function UPF0044 chr04_p...    47   7e-06

>IMGA|Medtr4g159520.1 Protein of unknown function UPF0044
           chr04_pseudomolecule_IMGAG_V3 40260003-40255331 E
           EGN_Mt090430 20090702
          Length = 698

 Score =  360 bits (925), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 162/215 (75%), Positives = 189/215 (87%)

Query: 1   PPDKKGVKPVQSPGPFLPGSGPRYVYTREEIQGEPLTRDEVKDLIKGCLKTKRQLNMGRD 60
           PP KKGVKPVQSPGPFLPG+ PRYV +REE+ GEPLT++E+ +L++  LK+ RQLN+GRD
Sbjct: 137 PPHKKGVKPVQSPGPFLPGTSPRYVMSREEVLGEPLTKEEINELVRSTLKSSRQLNLGRD 196

Query: 61  GLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTGGKVIHRKAGLVYLFRG 120
           G  HNMLDNIHAHWKRRRVCKIKC GVCTVDMDNVCQQLEEKTGGKVI+R+ G++YLFRG
Sbjct: 197 GFIHNMLDNIHAHWKRRRVCKIKCIGVCTVDMDNVCQQLEEKTGGKVIYRRGGVIYLFRG 256

Query: 121 RNYNYRTRPRFPLMLWKPVTPVYPRLIQRAPEGLTVEEAAEMRKKGRDLIPIRKLARNGV 180
           RNYN++TRPRFPLMLWKPV PVYPRLIQ+ PEGLT+EEA EMR+KGR L PI KL +NGV
Sbjct: 257 RNYNHKTRPRFPLMLWKPVPPVYPRLIQQVPEGLTLEEATEMRQKGRTLTPICKLGKNGV 316

Query: 181 FYNLAHEVRLAFQVCELVRINCQAIVRSDCRKIGA 215
           +YNL + VR AF+ CELVR+NCQ + +SD RKIGA
Sbjct: 317 YYNLVNNVREAFEECELVRVNCQGLNKSDYRKIGA 351


>IMGA|Medtr7g083490.1 Protein of unknown function UPF0044
           chr07_pseudomolecule_IMGAG_V3 17844639-17840971 H
           EGN_Mt090430 20090702
          Length = 407

 Score =  215 bits (547), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 109/189 (57%), Positives = 131/189 (69%), Gaps = 2/189 (1%)

Query: 28  REEIQGEPLTRDEVKDLIKGCL--KTKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCK 85
           RE +QG+ LT  E K L+  C   KTKRQ+NMGRDGLTHNML  IH HWK     +IKC 
Sbjct: 153 REHVQGDALTNAERKALVLQCERGKTKRQVNMGRDGLTHNMLIEIHNHWKYTEAVRIKCM 212

Query: 86  GVCTVDMDNVCQQLEEKTGGKVIHRKAGLVYLFRGRNYNYRTRPRFPLMLWKPVTPVYPR 145
           GV TVDM NVC QLE+KT GKVI R  G + L+RGRNYN R RP  P+MLWKP  PVYPR
Sbjct: 213 GVPTVDMKNVCTQLEDKTFGKVIFRHGGTLILYRGRNYNSRKRPAIPVMLWKPHEPVYPR 272

Query: 146 LIQRAPEGLTVEEAAEMRKKGRDLIPIRKLARNGVFYNLAHEVRLAFQVCELVRINCQAI 205
           LI+   +GL++EE   MRK+G  +  + KLA+NG + +L   VR AF  CELVRI+CQ +
Sbjct: 273 LIKTTIDGLSIEETKAMRKRGLAVPALTKLAKNGYYAHLVTMVRDAFLTCELVRIDCQGL 332

Query: 206 VRSDCRKIG 214
            R D +KIG
Sbjct: 333 ERKDYKKIG 341


>IMGA|Medtr1g089760.1 Protein of unknown function UPF0044
           chr01_pseudomolecule_IMGAG_V3 17961218-17967089 E
           EGN_Mt090430 20090702
          Length = 838

 Score = 58.2 bits (139), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/88 (34%), Positives = 48/88 (54%)

Query: 36  LTRDEVKDLIKGCLKTKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNV 95
           L   E++ L+K     K +  +G  G+T   +D IH  WK   + ++K +G   ++M  +
Sbjct: 211 LPESELRRLLKLTFMKKHKTRIGGGGVTQAAVDKIHERWKTSEIVRLKFEGDAALNMKRM 270

Query: 96  CQQLEEKTGGKVIHRKAGLVYLFRGRNY 123
            + LE+KTGG VI R    V L+RG +Y
Sbjct: 271 HEILEKKTGGLVIWRSGNSVSLYRGVSY 298


>IMGA|Medtr6g008920.1 Protein of unknown function UPF0044
           chr06_pseudomolecule_IMGAG_V3 1317087-1308201 E
           EGN_Mt090430 20090702
          Length = 785

 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 61/135 (45%), Gaps = 6/135 (4%)

Query: 5   KGVKPVQSPGPFLPGSGPRYVYTREEIQGEPLTRDEVKDLIKGCLKTKRQLNMGRDGLTH 64
           K    +Q     L  SG       EEI  E +T +E   L +  LK K  L +GR G+  
Sbjct: 317 KAKAAIQRTSFKLAQSGKDESLQEEEIDKESITEEERYMLRRIGLKMKPFLLLGRRGVFD 376

Query: 65  NMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTGGKVIH----RKAGLVYLFRG 120
             ++N+H HWK R + KI C            + LE ++GG ++      K   + ++RG
Sbjct: 377 GTVENMHLHWKYRELVKIICNQESVEYAHQTARTLEAESGGILVAVERVNKGYAIIVYRG 436

Query: 121 RNYNY--RTRPRFPL 133
           +NY+     RPR  L
Sbjct: 437 KNYSRPDSLRPRTLL 451


>IMGA|Medtr6g009130.1 Protein of unknown function UPF0044
           chr06_pseudomolecule_IMGAG_V3 1421460-1412687 E
           EGN_Mt090430 20090702
          Length = 835

 Score = 53.9 bits (128), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 6/108 (5%)

Query: 29  EEIQGEPLTRDEVKDLIKGCLKTKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVC 88
           EEI  E +T +E   L +  LK K  L +GR G+    ++N+H HWK R + KI C    
Sbjct: 346 EEIDKESITEEERYMLRRIGLKMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIICNQES 405

Query: 89  TVDMDNVCQQLEEKTGGKVIH----RKAGLVYLFRGRNYNY--RTRPR 130
                   + LE ++GG ++      K   + ++RG+NY+     RPR
Sbjct: 406 VEYAHQTARTLEAESGGILVAVERVNKGYAIIVYRGKNYSRPDSLRPR 453


>IMGA|Medtr8g077280.1 Protein of unknown function UPF0044
           chr08_pseudomolecule_IMGAG_V3 15371801-15373844 E
           EGN_Mt090430 20090702
          Length = 342

 Score = 53.5 bits (127), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 37/76 (48%)

Query: 48  CLKTKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTGGKV 107
            L    +  +G  G+TH ++D IH  W    V K K     + +M    Q LE KTGG V
Sbjct: 2   ALMMVERFGVGVAGITHELVDAIHEKWMVDEVVKFKFDSPLSANMKRANQILESKTGGIV 61

Query: 108 IHRKAGLVYLFRGRNY 123
           + R    + L+RG +Y
Sbjct: 62  VWRLGSSIVLYRGMSY 77


>IMGA|Medtr8g077160.1 Protein of unknown function UPF0044
           chr08_pseudomolecule_IMGAG_V3 15316657-15314614 E
           EGN_Mt090430 20090702
          Length = 387

 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 37/76 (48%)

Query: 48  CLKTKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTGGKV 107
            L    +  +G  G+TH ++D IH  W    V K K     + +M    Q LE KTGG V
Sbjct: 2   ALMMVERFGVGVAGITHELVDAIHEKWMVDEVVKFKFDSPLSANMKRANQILESKTGGIV 61

Query: 108 IHRKAGLVYLFRGRNY 123
           + R    + L+RG +Y
Sbjct: 62  VWRLGSSIVLYRGMSY 77


>IMGA|Medtr1g068460.1 Protein of unknown function UPF0044
           chr01_pseudomolecule_IMGAG_V3 13641270-13652256 E
           EGN_Mt090430 20090702
          Length = 274

 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 3/93 (3%)

Query: 34  EPLTRDEVKDLIKGCLKTKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMD 93
           E LT +E    +K  LK+K  + +GR G+   ++ N+H HWK+ +  ++  K     ++ 
Sbjct: 156 EILTPEEHFFFLKMGLKSKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVVKTFSAEEVK 215

Query: 94  NVCQQLEEKTGGKV--IHRKAGLVYLFRGRNYN 124
            +  +L   TGG V  IH +  ++ ++RG+NY+
Sbjct: 216 EIATELARLTGGIVLGIHEEDTII-MYRGKNYS 247


>IMGA|Medtr1g068790.1 Protein of unknown function UPF0044
           chr01_pseudomolecule_IMGAG_V3 13810315-13822130 E
           EGN_Mt090430 20090702
          Length = 443

 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 3/93 (3%)

Query: 34  EPLTRDEVKDLIKGCLKTKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMD 93
           E LT +E    +K  LK+K  + +GR G+   ++ N+H HWK+ +  ++  K     ++ 
Sbjct: 156 EILTPEEHFFFLKMGLKSKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVVKTFSAEEVK 215

Query: 94  NVCQQLEEKTGGKV--IHRKAGLVYLFRGRNYN 124
            +  +L   TGG V  IH +  ++ ++RG+NY+
Sbjct: 216 EIATELARLTGGIVLGIHEEDTII-MYRGKNYS 247


>IMGA|Medtr4g158080.1 Protein of unknown function UPF0044
           chr04_pseudomolecule_IMGAG_V3 39573211-39569830 E
           EGN_Mt090430 20090702
          Length = 350

 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 23/88 (26%), Positives = 49/88 (55%)

Query: 36  LTRDEVKDLIKGCLKTKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNV 95
           L ++E+  L    +  K+++++ + GLT ++L  IH  W    + K+K       +M+  
Sbjct: 106 LEKEELSRLRTMGIHLKQKISIPKSGLTRSVLQRIHHQWNTNELVKLKFHQQLVQNMNLA 165

Query: 96  CQQLEEKTGGKVIHRKAGLVYLFRGRNY 123
              ++ +TGG VI R   +++++RG++Y
Sbjct: 166 HNIVQRRTGGLVIWRSGSVMWVYRGKSY 193


>IMGA|Medtr4g157690.1 Protein of unknown function UPF0044
           chr04_pseudomolecule_IMGAG_V3 39356679-39361728 E
           EGN_Mt090430 20090702
          Length = 343

 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 1/96 (1%)

Query: 29  EEIQGEPLTRDEVKDLIKGCLKTKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVC 88
           E    E LT +E   L +   K K  + +GR G+   ++ N+H HWK+    K+ CK   
Sbjct: 202 ETFDPEILTEEERHYLKRTGEKKKHYVPVGRRGVFGEVVLNMHLHWKKHETVKVICKPCK 261

Query: 89  TVDMDNVCQQLEEKTGGKVIHRKA-GLVYLFRGRNY 123
                   ++L   + G VI  K   ++  +RGRNY
Sbjct: 262 PGQAHEYTEELTRPSKGIVIDIKPNNIIIFYRGRNY 297