Jatropha Genome Database

JcCB0356581.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0356581.10 - phase: 1 /partial
         (130 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g005000.1 Choline kinase, N-terminal; Protein kinase-...    87   3e-18
IMGA|Medtr8g044390.1 Choline/ethanolamine kinase; Choline kinase...    80   2e-16
IMGA|Medtr1g124510.1 Choline/ethanolamine kinase chr01_pseudomol...    75   7e-15
IMGA|AC233576_9.1 Choline/ethanolamine kinase AC233576.2 33992-3...    71   1e-13

>IMGA|Medtr3g005000.1 Choline kinase, N-terminal; Protein
           kinase-like chr03_pseudomolecule_IMGAG_V3 73682-77870 H
           EGN_Mt090430 20090702
          Length = 500

 Score = 86.7 bits (213), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 46/116 (39%), Positives = 65/116 (56%), Gaps = 8/116 (6%)

Query: 5   IDFEYGSYSYRGYDIANHFNEYAG-------YDCDYSLYPSKDEQYHFFRHYLQPDKPHE 57
           ID+EY S++   YDIANHF E A        +  DYS YP  +E+  F + YL+     E
Sbjct: 334 IDYEYASHNPVAYDIANHFCEMAANYHTETPHILDYSKYPDVEERERFVKAYLRTSG-EE 392

Query: 58  VSDRDLEALYIEANTFMLASHFFWALWALIQAKMSPIDFDYLGYFFLRYNEYKKQK 113
            SD ++E L  E   + LA+H FW LW +I  +++ I+FDY  Y   R+ EY  +K
Sbjct: 393 PSDSEVEHLLQEVEKYTLANHLFWGLWGIISGQVNTIEFDYKEYAKQRFQEYWARK 448


>IMGA|Medtr8g044390.1 Choline/ethanolamine kinase; Choline kinase,
           N-terminal chr08_pseudomolecule_IMGAG_V3 9935948-9933269
           H EGN_Mt090430 20090702
          Length = 411

 Score = 80.5 bits (197), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 63/119 (52%), Gaps = 8/119 (6%)

Query: 2   LYFIDFEYGSYSYRGYDIANHFNEYAG-------YDCDYSLYPSKDEQYHFFRHYLQPDK 54
           +  ID+EY SY+   YDIANHF+E A        +  DYS YP  +E+  F   YL    
Sbjct: 240 VTIIDYEYASYNPVAYDIANHFSEMAANYHTETPHILDYSKYPDLEERQRFVHTYLS-SS 298

Query: 55  PHEVSDRDLEALYIEANTFMLASHFFWALWALIQAKMSPIDFDYLGYFFLRYNEYKKQK 113
             + SD +++ L  E   + LASH  W LW ++   ++ IDFDY  Y   R+ EY  +K
Sbjct: 299 GEQPSDNEVQKLLDEIEKYTLASHLLWGLWGIVSEHVNKIDFDYKEYAKQRFQEYWSRK 357


>IMGA|Medtr1g124510.1 Choline/ethanolamine kinase
           chr01_pseudomolecule_IMGAG_V3 27147260-27146045 F
           EGN_Mt090430 20090702
          Length = 152

 Score = 75.5 bits (184), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 48/132 (36%), Positives = 69/132 (52%), Gaps = 14/132 (10%)

Query: 2   LYFIDFEYGSYSYRGYDIANHFNEYAG-------YDCDYSLYPSKDEQYHFFRHYLQPD- 53
           +  ID+EY SY+   YD+ANHF E A        +  DYS YP  +E+  F R YL  + 
Sbjct: 9   ITLIDYEYASYNPIAYDLANHFCEMAADYHSDTPHFLDYSKYPELEERQRFIRVYLSSEG 68

Query: 54  -KPHEVSDRDLEALYIEANTFMLASHFFWALWALIQAKMSPIDFDYLGYFFLRYNEY--K 110
            KP   S+  +  L      + LA+H FW LW LI + ++ IDFDY  Y   R+ +Y  +
Sbjct: 69  KKP---SNAKVNQLMTAVEKYTLANHLFWGLWGLISSYVNKIDFDYKEYARQRFQQYWLR 125

Query: 111 KQKEMSSSLALS 122
           K   + SS  ++
Sbjct: 126 KPTLLDSSTIVA 137


>IMGA|AC233576_9.1 Choline/ethanolamine kinase AC233576.2
           33992-36306 E EGN_Mt090430 20090702
          Length = 206

 Score = 71.2 bits (173), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 64/121 (52%), Gaps = 12/121 (9%)

Query: 2   LYFIDFEYGSYSYRGYDIANHFNEYAG-------YDCDYSLYPSKDEQYHFFRHYL--QP 52
           +  ID+EY SY+   YD+ANHF E A        +  DYS YP  +E+  F   YL  + 
Sbjct: 84  ITLIDYEYSSYNPVAYDLANHFCEMAANYHTDTPHVLDYSKYPDLEERRRFIYTYLSSEG 143

Query: 53  DKPHEVSDRDLEALYIEANTFMLASHFFWALWALIQAKMSPIDFDYLGYFFLRYNEYKKQ 112
           +KP   S   ++ L      + LA+H FW LW LI + ++ IDFDY  Y   R+ +Y  +
Sbjct: 144 EKP---SGAQVDQLANLVEKYTLANHLFWGLWGLISSYVNTIDFDYKEYSRQRFKQYHLK 200

Query: 113 K 113
           K
Sbjct: 201 K 201