Jatropha Genome Database

JcCB0355951.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0355951.10 - phase: 0 
         (277 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g025290.1 Carotenoid oxygenase chr05_pseudomolecule_I...   163   1e-40
IMGA|Medtr5g025250.1 Carotenoid oxygenase chr05_pseudomolecule_I...   156   1e-38
IMGA|Medtr5g025270.1 Carotenoid oxygenase chr05_pseudomolecule_I...   153   7e-38
IMGA|Medtr3g130620.1 Carotenoid oxygenase chr03_pseudomolecule_I...    62   3e-10
IMGA|Medtr7g040830.1 Carotenoid oxygenase chr07_pseudomolecule_I...    55   5e-08

>IMGA|Medtr5g025290.1 Carotenoid oxygenase
           chr05_pseudomolecule_IMGAG_V3 10116366-10118405 E
           EGN_Mt090430 20090702
          Length = 581

 Score =  163 bits (412), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 92/237 (38%), Positives = 137/237 (57%), Gaps = 17/237 (7%)

Query: 21  DATKKSRFGVLPRYAKDDRQIRWFELPNCMIFHNANAWEEGDEVVLITCRLQNPDLDMVS 80
           D +K SR G+LPRYA D+ +++WF++P   I H  N+W+  D+   +T  L  P++  + 
Sbjct: 361 DPSKVSRIGILPRYASDESKMKWFDVPGFNIMHAINSWDGEDDEETVT--LIAPNVLSIE 418

Query: 81  GNVKEKLENFTNELYEMRFNMKTGAASQKKLSTSAVDFPRVNESYTGRKQRYVYGTILDS 140
            +  E+LE     + +++ N+KTG  S++ LS   +DF  +N  Y G+K R+VY  I + 
Sbjct: 419 -HTMERLELVHAMIEKVKINIKTGIVSRQPLSARNLDFAVINGDYMGKKNRFVYAAIGNP 477

Query: 141 IAKVTGIIKFDLHAEPQPEKQKLEVGGNVKGIFDLGPGRFGSEAIFVPREPGTSSEEDDG 200
           + K++G++K D+            + G   G    G G +G E  FV RE G   EEDDG
Sbjct: 478 MPKISGVVKIDV------------LKGEEVGCRLYGEGCYGGEPFFVAREDG--EEEDDG 523

Query: 201 YLIFFVHDEKTGKSSANVIDAKTMSSDPVAVVELPHRVPYGFHAFFVTEVNQTSFLV 257
           YL+ +VHDEK G+S   V+DAK+   + VA V+LP RVPYGFH  FV E + T   V
Sbjct: 524 YLVSYVHDEKKGESKFLVMDAKSPEFEIVAEVKLPRRVPYGFHGLFVKESDITKLSV 580


>IMGA|Medtr5g025250.1 Carotenoid oxygenase
           chr05_pseudomolecule_IMGAG_V3 10093326-10091325 E
           EGN_Mt090430 20090702
          Length = 578

 Score =  156 bits (394), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 87/239 (36%), Positives = 133/239 (55%), Gaps = 22/239 (9%)

Query: 21  DATKKSRFGVLPRYAKDDRQIRWFELPNCMIFHNANAWEE--GDEVVLITCRLQNPDLDM 78
           D +K SR G+LPRYA D+ +++WF++P   I H  NAW+E  G  V L+   +      +
Sbjct: 359 DPSKVSRIGILPRYANDESKMKWFDVPGFNIMHTINAWDEEDGGTVTLVATNI------L 412

Query: 79  VSGNVKEKLENFTNELYEMRFNMKTGAASQKKLSTSAVDFPRVNESYTGRKQRYVYGTIL 138
              +V E+++     + ++R N++TG  +++ LS   +D   +N  + G+K R+VY  I 
Sbjct: 413 SVQHVMERMDLIHAMIEKVRINVETGLVTRQPLSARNLDLAVINNDFLGKKSRFVYAAIG 472

Query: 139 DSIAKVTGIIKFDLHAEPQPEKQKLEVGGNVKGIFDLGPGRFGSEAIFVPREPGTSSEED 198
           + + K +G++K D+            + G   G    G G +G E  FV  E G   EED
Sbjct: 473 NPMPKFSGVVKIDV------------LKGEEVGCRLYGEGCYGGEPFFVAMEGG--EEED 518

Query: 199 DGYLIFFVHDEKTGKSSANVIDAKTMSSDPVAVVELPHRVPYGFHAFFVTEVNQTSFLV 257
           DGYL+ +VHDEK G+S   V+DAK+   + VA V+LP RVPYGFH  FV + + T   V
Sbjct: 519 DGYLVSYVHDEKKGESKFLVMDAKSPEFEIVAEVKLPRRVPYGFHGLFVKQSDITKLSV 577


>IMGA|Medtr5g025270.1 Carotenoid oxygenase
           chr05_pseudomolecule_IMGAG_V3 10102084-10100345 E
           EGN_Mt090430 20090702
          Length = 579

 Score =  153 bits (387), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 87/237 (36%), Positives = 133/237 (56%), Gaps = 18/237 (7%)

Query: 21  DATKKSRFGVLPRYAKDDRQIRWFELPNCMIFHNANAWEEGDEVVLITCRLQNPDLDMVS 80
           D +K  R G+LPRYA ++ +++WF++P   I H  NAW+E D     T  +  P++  V 
Sbjct: 360 DPSKVPRIGILPRYADNESKMKWFDVPGLNIMHLINAWDEEDGK---TVTIVAPNILCVE 416

Query: 81  GNVKEKLENFTNELYEMRFNMKTGAASQKKLSTSAVDFPRVNESYTGRKQRYVYGTILDS 140
            ++ E+LE     + ++R N++TG  +++ LS   +D   +N  + G+K R++Y  I + 
Sbjct: 417 -HMMERLELIHEMIEKVRINVETGIVTRQPLSARNLDLAVINNEFLGKKHRFIYAAIGNP 475

Query: 141 IAKVTGIIKFDLHAEPQPEKQKLEVGGNVKGIFDLGPGRFGSEAIFVPREPGTSSEEDDG 200
           + K +G++K D+            + G   G    G   +G E  FV RE G   EEDDG
Sbjct: 476 MPKFSGVVKIDV------------LKGEEVGCRLYGEDCYGGEPFFVAREDG--EEEDDG 521

Query: 201 YLIFFVHDEKTGKSSANVIDAKTMSSDPVAVVELPHRVPYGFHAFFVTEVNQTSFLV 257
           YL+ +VHDEK G+S   V+DAK+   + VA V+LP RVPYGFH  FV E + T   V
Sbjct: 522 YLVSYVHDEKKGESRFLVMDAKSPEFEIVAEVKLPRRVPYGFHGLFVKESDITRLSV 578


>IMGA|Medtr3g130620.1 Carotenoid oxygenase
           chr03_pseudomolecule_IMGAG_V3 33198267-33194913 E
           EGN_Mt090430 20090702
          Length = 565

 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 92/222 (41%), Gaps = 38/222 (17%)

Query: 45  ELPNCMIFHNANAWEEGDE-----VVLITCRLQNPDLDMVSGNVKEKLENFTNE-----L 94
           E+P  + FH  NA+EE DE      V+  C   N + D++     + L +F  E      
Sbjct: 360 EVPLFVTFHFINAYEEEDEDGRVTAVIADCCEHNSNTDILDKLRLQNLRSFNGEDVLPDA 419

Query: 95  YEMRFNMKTGAASQKKLSTS--------AVDFPRVNESYTGRKQRYVYGTILDSIAKVTG 146
              RF +    +    L  +         +D   +N +Y G K RY Y            
Sbjct: 420 RVGRFRIPLDGSPYGTLDAALDPNEHGKGMDMCSINPNYLGLKYRYAYACGAQRPCNFPN 479

Query: 147 -IIKFDLHAEPQPEKQKLEVGGNVKGIFDLGPGRFGSEAIFVPREPGTSSEEDDGYLIFF 205
            + K DL +E              K  ++   G   SE  FVPR PG +++EDDG +I  
Sbjct: 480 TLTKIDLQSE------------RAKNWYE--EGAVPSEPFFVPR-PG-ATKEDDGVVISI 523

Query: 206 VHDEKTGKSSANVIDAKTMSSDPVAVVELPHRVPYGFHAFFV 247
           +  EK G+  A V+D  T     +A  + P+ +PYG H  +V
Sbjct: 524 I-SEKNGEGYALVLDGSTFEE--IARAKFPYGLPYGLHGCWV 562


>IMGA|Medtr7g040830.1 Carotenoid oxygenase
           chr07_pseudomolecule_IMGAG_V3 10149889-10155418 E
           EGN_Mt090430 20090702
          Length = 621

 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 27/144 (18%)

Query: 115 AVDFPRVNESYTGRKQRYVY-GTILDSIAKVTG-----IIKFDLHAEPQPEKQKLEVGGN 168
           + DFP  N S++G++ +Y+Y  T L S   +       I+KFDL            V  +
Sbjct: 490 SADFPATNPSFSGKQNKYLYAATTLGSRKTLPSFPFDTIVKFDL------------VNNS 537

Query: 169 VKGIFDLGPGRFGSEAIFVPREPGTSSEEDDGYLIFFVHDEKTGKSSANVIDAKTMSSDP 228
           VK  +  G  +F  E IFVP+      EEDDGYL+   +     +    +++ K + +  
Sbjct: 538 VKA-WTAGSRKFVGEPIFVPK----GEEEDDGYLLVVEYATSMQRCCLVILNPKEIGTKK 592

Query: 229 --VAVVELPHRV--PYGFHAFFVT 248
             VA +E+P  +  P GFH  +  
Sbjct: 593 ALVARIEIPMHLNFPLGFHGLWAA 616