Jatropha Genome Database

JcCB0354791.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0354791.10 - phase: 1 /partial
         (102 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g077510.1 Phosphoglycerate kinase; ; chr02_pseudomole...   192   5e-50
IMGA|Medtr2g077490.1 Phosphoglycerate kinase; ; chr02_pseudomole...   171   9e-44
IMGA|Medtr2g077480.1 Phosphoglycerate kinase; ; chr02_pseudomole...   171   1e-43
IMGA|Medtr2g077490.2 Phosphoglycerate kinase; ; chr02_pseudomole...   170   1e-43

>IMGA|Medtr2g077510.1 Phosphoglycerate kinase; ;
           chr02_pseudomolecule_IMGAG_V3 17878258-17873114 E
           EGN_Mt090430 20090702
          Length = 479

 Score =  192 bits (487), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 95/102 (93%), Positives = 102/102 (100%)

Query: 1   VKTFSEALETTKTVIWNGPMGVFEFDKFAVGTEAIAKKLAELSGKGVTTIIGGGDSVAAV 60
           +KTF+EAL+TT+T+IWNGPMGVFEFDKFAVGTE+IAKKLA+LSGKGVTTIIGGGDSVAAV
Sbjct: 378 IKTFNEALDTTQTIIWNGPMGVFEFDKFAVGTESIAKKLADLSGKGVTTIIGGGDSVAAV 437

Query: 61  EKVGVADVMSHISTGGGASLELLEGKELPGVLALDEATPVAV 102
           EKVGVADVMSHISTGGGASLELLEGKELPGVLALDEATPVAV
Sbjct: 438 EKVGVADVMSHISTGGGASLELLEGKELPGVLALDEATPVAV 479


>IMGA|Medtr2g077490.1 Phosphoglycerate kinase; ;
           chr02_pseudomolecule_IMGAG_V3 17870259-17859756 E
           EGN_Mt090430 20090702
          Length = 401

 Score =  171 bits (432), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 84/97 (86%), Positives = 93/97 (95%)

Query: 1   VKTFSEALETTKTVIWNGPMGVFEFDKFAVGTEAIAKKLAELSGKGVTTIIGGGDSVAAV 60
           +KTF+EAL+ ++T+IWNGPMGVFEFDKFA GTEAIAKKLAE+SGKGVTTIIGGGDSVAAV
Sbjct: 305 IKTFNEALDKSQTIIWNGPMGVFEFDKFAAGTEAIAKKLAEVSGKGVTTIIGGGDSVAAV 364

Query: 61  EKVGVADVMSHISTGGGASLELLEGKELPGVLALDEA 97
           EKVG+AD MSHISTGGGASLELLEGK LPGVLALD+A
Sbjct: 365 EKVGLADKMSHISTGGGASLELLEGKPLPGVLALDDA 401


>IMGA|Medtr2g077480.1 Phosphoglycerate kinase; ;
           chr02_pseudomolecule_IMGAG_V3 17863663-17859756 E
           EGN_Mt090430 20090702
          Length = 401

 Score =  171 bits (432), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 84/97 (86%), Positives = 93/97 (95%)

Query: 1   VKTFSEALETTKTVIWNGPMGVFEFDKFAVGTEAIAKKLAELSGKGVTTIIGGGDSVAAV 60
           +KTF+EAL+ ++T+IWNGPMGVFEFDKFA GTEAIAKKLAE+SGKGVTTIIGGGDSVAAV
Sbjct: 305 IKTFNEALDKSQTIIWNGPMGVFEFDKFAAGTEAIAKKLAEVSGKGVTTIIGGGDSVAAV 364

Query: 61  EKVGVADVMSHISTGGGASLELLEGKELPGVLALDEA 97
           EKVG+AD MSHISTGGGASLELLEGK LPGVLALD+A
Sbjct: 365 EKVGLADKMSHISTGGGASLELLEGKPLPGVLALDDA 401


>IMGA|Medtr2g077490.2 Phosphoglycerate kinase; ;
           chr02_pseudomolecule_IMGAG_V3 17870259-17866346 E
           EGN_Mt090430 20090702
          Length = 401

 Score =  170 bits (431), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 84/97 (86%), Positives = 93/97 (95%)

Query: 1   VKTFSEALETTKTVIWNGPMGVFEFDKFAVGTEAIAKKLAELSGKGVTTIIGGGDSVAAV 60
           +KTF+EAL+ ++T+IWNGPMGVFEFDKFA GTEAIAKKLAE+SGKGVTTIIGGGDSVAAV
Sbjct: 305 IKTFNEALDKSQTIIWNGPMGVFEFDKFAAGTEAIAKKLAEVSGKGVTTIIGGGDSVAAV 364

Query: 61  EKVGVADVMSHISTGGGASLELLEGKELPGVLALDEA 97
           EKVG+AD MSHISTGGGASLELLEGK LPGVLALD+A
Sbjct: 365 EKVGLADKMSHISTGGGASLELLEGKPLPGVLALDDA 401