Jatropha Genome Database

JcCB0353641.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0353641.10 + phase: 0 
         (62 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g018630.1 hypothetical protein chr05_pseudomolecule_I...    64   2e-11

>IMGA|Medtr5g018630.1 hypothetical protein
          chr05_pseudomolecule_IMGAG_V3 6810021-6811119 E
          EGN_Mt090430 20090702
          Length = 73

 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 23/43 (53%), Positives = 34/43 (79%)

Query: 1  MCYEVKCSSCGKTTWCGCGRHVRSVYKRIPQGQHCLCNGWPGV 43
          MCY ++C++CGK TW GCG+H+ ++Y+ I +G HC+C  WPGV
Sbjct: 1  MCYRLECATCGKYTWGGCGKHLTTLYRSIDEGMHCMCRSWPGV 43