Jatropha Genome Database

JcCB0343111.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0343111.10 - phase: 0 /partial
         (302 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g156300.1 TB2/DP1 and HVA22 related protein chr03_pse...   307   4e-84
IMGA|Medtr1g030980.1 TB2/DP1 and HVA22 related protein chr01_pse...   268   3e-72
IMGA|AC146630_4.1 TB2/DP1 and HVA22 related protein AC146630.25 ...   174   6e-44
IMGA|AC146630_4.3 TB2/DP1 and HVA22 related protein AC146630.25 ...   138   3e-33
IMGA|AC146630_4.2 TB2/DP1 and HVA22 related protein AC146630.25 ...   136   1e-32
IMGA|Medtr5g019610.1 TB2/DP1 and HVA22 related protein chr05_pse...    68   7e-12
IMGA|Medtr3g058560.1 TB2/DP1 and HVA22 related protein; Conserve...    57   1e-08
IMGA|Medtr8g112530.1 TB2/DP1 and HVA22 related protein chr08_pse...    51   8e-07
IMGA|Medtr5g099090.1 TB2/DP1 and HVA22 related protein chr05_pse...    48   5e-06
IMGA|Medtr3g150830.1 TB2/DP1 and HVA22 related protein chr03_pse...    48   7e-06

>IMGA|Medtr3g156300.1 TB2/DP1 and HVA22 related protein
           chr03_pseudomolecule_IMGAG_V3 40961821-40964607 E
           EGN_Mt090430 20090702
          Length = 284

 Score =  307 bits (787), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 162/287 (56%), Positives = 193/287 (67%), Gaps = 21/287 (7%)

Query: 15  MIFGYAYPAYECYKTVEKNKPEIEHLRFWCQYWILVAVLTVCERIGDAFISWVPMYSEAK 74
           M+FGYAYPAYECYK VEKN+PEIE LRFWCQYWILVA+LTVCERIGD FISWVPMYSE K
Sbjct: 12  MVFGYAYPAYECYKAVEKNRPEIEQLRFWCQYWILVALLTVCERIGDTFISWVPMYSETK 71

Query: 75  LAFIIYLWYPKTKGTTYVYDSFFKPYVAKHENEIDRSLLELRTRAGDMFILYWQRAASYG 134
           LAF IYLWYPKTKGTTYVYDSFF+PYVAKHE +IDR+L+EL+TRAGD+ + YWQ+AASYG
Sbjct: 72  LAFFIYLWYPKTKGTTYVYDSFFRPYVAKHEPDIDRNLMELKTRAGDIAVSYWQKAASYG 131

Query: 135 QTRVFDILQYVASQSTTPRPRAAQPQQGTRTRQPANAPTRQPSTTSNCQPAVQQXXXXXX 194
           QTR+FDILQYVA+QS TP  R AQ + G R RQPA       S++SN             
Sbjct: 132 QTRIFDILQYVAAQS-TPTARPAQQRPGVRARQPA-------SSSSNQHAPPTAPPAEGP 183

Query: 195 XXXXXXXXXXRHQAEVNEEVIXXXXXXXXXXXXXXXXXXXXTAPSNAQKTNAS-ETSSQP 253
                     +HQ E+ EE+                      A  N QK   + E+ +Q 
Sbjct: 184 TPPTSSSSSSQHQKELAEEL----------GSSQVPKTLSSLAGLNTQKNIPTQESGNQS 233

Query: 254 SSSKAEAMEIEAE--PSKNENANPPPKDTNMDEAIRRTSARLRKSRS 298
           + ++AE M+IEA    S + N NPP  +T M+E+IR T  RLRK+RS
Sbjct: 234 APAEAEPMQIEAALPSSSSANENPPSSETIMEESIRVTRGRLRKTRS 280


>IMGA|Medtr1g030980.1 TB2/DP1 and HVA22 related protein
           chr01_pseudomolecule_IMGAG_V3 7410102-7417401 E
           EGN_Mt090430 20090702
          Length = 402

 Score =  268 bits (684), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 123/169 (72%), Positives = 140/169 (82%), Gaps = 2/169 (1%)

Query: 16  IFGYAYPAYECYKTVEKNKPEIEHLRFWCQYWILVAVLTVCERIGDAFISWVPMYSEAKL 75
           +FGYAYPAYECYK VEKNKPEIE LRFWCQYWILVAV+TVCER GD F+SWVPMY EAKL
Sbjct: 75  VFGYAYPAYECYKVVEKNKPEIEQLRFWCQYWILVAVMTVCERFGDTFVSWVPMYCEAKL 134

Query: 76  AFIIYLWYPKTKGTTYVYDSFFKPYVAKHENEIDRSLLELRTRAGDMFILYWQRAASYGQ 135
           AF I+LWYPKTKGTTYVYDSFF+PYVAKHE EIDRSL ELRTRAGD  ++Y QRA SYGQ
Sbjct: 135 AFFIFLWYPKTKGTTYVYDSFFRPYVAKHEPEIDRSLSELRTRAGDYVVVYSQRAVSYGQ 194

Query: 136 TRVFDILQYVASQST-TPRPRAAQPQQGTRTRQPANAPTRQPSTTSNCQ 183
           TR++DIL++V++QST  P P   +P  G R R+PA A   QP+T +  Q
Sbjct: 195 TRIYDILKFVSAQSTPAPHPAQQRPGPGVRVRKPAPA-KGQPATATEPQ 242


>IMGA|AC146630_4.1 TB2/DP1 and HVA22 related protein AC146630.25
           14266-11923 E EGN_Mt090430 20090702
          Length = 191

 Score =  174 bits (440), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 73/137 (53%), Positives = 95/137 (69%)

Query: 12  CGRMIFGYAYPAYECYKTVEKNKPEIEHLRFWCQYWILVAVLTVCERIGDAFISWVPMYS 71
           C  ++ GYAYP +ECYKTVE+NK E++ LRFWCQYWI+VA  TV E+  D  I W+PMY 
Sbjct: 9   CLILLLGYAYPGFECYKTVERNKVEMDELRFWCQYWIIVAFFTVLEKFADVVIGWLPMYG 68

Query: 72  EAKLAFIIYLWYPKTKGTTYVYDSFFKPYVAKHENEIDRSLLELRTRAGDMFILYWQRAA 131
           E KLA  IY+WYPKTKGT YVY+   +PYV+K+E + D+   E R R  D+ I YWQ   
Sbjct: 69  ELKLALFIYMWYPKTKGTGYVYNKVLRPYVSKNEIDFDKKFQEWRVRGWDLAIFYWQNCT 128

Query: 132 SYGQTRVFDILQYVASQ 148
             GQT  F ++ ++A+Q
Sbjct: 129 ELGQTAFFQVIDHLAAQ 145


>IMGA|AC146630_4.3 TB2/DP1 and HVA22 related protein AC146630.25
           14266-11923 E EGN_Mt090430 20090702
          Length = 129

 Score =  138 bits (348), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 58/122 (47%), Positives = 80/122 (65%)

Query: 37  IEHLRFWCQYWILVAVLTVCERIGDAFISWVPMYSEAKLAFIIYLWYPKTKGTTYVYDSF 96
           ++ LRFWCQYWI+VA  TV E+  D  I W+PMY E KLA  IY+WYPKTKGT YVY+  
Sbjct: 1   MDELRFWCQYWIIVAFFTVLEKFADVVIGWLPMYGELKLALFIYMWYPKTKGTGYVYNKV 60

Query: 97  FKPYVAKHENEIDRSLLELRTRAGDMFILYWQRAASYGQTRVFDILQYVASQSTTPRPRA 156
            +PYV+K+E + D+   E R R  D+ I YWQ     GQT  F ++ ++A+QS     ++
Sbjct: 61  LRPYVSKNEIDFDKKFQEWRVRGWDLAIFYWQNCTELGQTAFFQVIDHLAAQSKRLSGKS 120

Query: 157 AQ 158
           ++
Sbjct: 121 SK 122


>IMGA|AC146630_4.2 TB2/DP1 and HVA22 related protein AC146630.25
           14266-11923 E EGN_Mt090430 20090702
          Length = 158

 Score =  136 bits (343), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 57/112 (50%), Positives = 75/112 (66%)

Query: 37  IEHLRFWCQYWILVAVLTVCERIGDAFISWVPMYSEAKLAFIIYLWYPKTKGTTYVYDSF 96
           ++ LRFWCQYWI+VA  TV E+  D  I W+PMY E KLA  IY+WYPKTKGT YVY+  
Sbjct: 1   MDELRFWCQYWIIVAFFTVLEKFADVVIGWLPMYGELKLALFIYMWYPKTKGTGYVYNKV 60

Query: 97  FKPYVAKHENEIDRSLLELRTRAGDMFILYWQRAASYGQTRVFDILQYVASQ 148
            +PYV+K+E + D+   E R R  D+ I YWQ     GQT  F ++ ++A+Q
Sbjct: 61  LRPYVSKNEIDFDKKFQEWRVRGWDLAIFYWQNCTELGQTAFFQVIDHLAAQ 112


>IMGA|Medtr5g019610.1 TB2/DP1 and HVA22 related protein
           chr05_pseudomolecule_IMGAG_V3 7340395-7336482 F
           EGN_Mt090430 20090702
          Length = 197

 Score = 67.8 bits (164), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 11/167 (6%)

Query: 18  GYAYPAYECYKTVEKNKPEIEHLRFWCQYWILVAVLTVCERIGDAFISWVPMYSEAKLAF 77
           G   P Y  +K +E    + +       YW      ++ E   D  ISWVPMY   K AF
Sbjct: 37  GIGLPVYSTFKAIESKNQDAQQRCL--VYWAAFGSFSLIEVFTDKLISWVPMYYHVKFAF 94

Query: 78  IIYLWYPKTKGTTYVYDSFFKPYVAKHENEIDRSLLELRTRAGDMFILYWQRAASYGQTR 137
           +++L  P T G   +Y    +P++ KH+   DR +L L +      +  +Q+     +T 
Sbjct: 95  LVWLQLPPTNGAKQLYMKHIRPFLLKHQESADR-VLGLASCEVIKLVNSYQKEIQSVKTM 153

Query: 138 VFDILQYVASQSTTPRPRAAQPQQGTRTRQPANAPTRQPSTTSNCQP 184
           V  I +       +P      P    R++Q  ++P  + +T+S+ +P
Sbjct: 154 VGKITESADKMLRSP------PTASDRSQQ--HSPVDESATSSDAEP 192


>IMGA|Medtr3g058560.1 TB2/DP1 and HVA22 related protein; Conserved
           hypothetical protein 730 chr03_pseudomolecule_IMGAG_V3
           12785921-12783796 E EGN_Mt090430 20090702
          Length = 147

 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 11/76 (14%)

Query: 12  CGRMIFGYAYPAYECYKTVEKNKPEIEHLRFWCQYWILVAVLTVCERIGDAFISWVPMYS 71
           CG +   Y     +C K  EK +  I        + I+ A LTV E+  +  I W+PMY 
Sbjct: 63  CGII---YCLSRMDCEKVTEKLQVGI--------FLIIAAFLTVLEKFSNVVIGWLPMYG 111

Query: 72  EAKLAFIIYLWYPKTK 87
           E KLA  I++WYPKT+
Sbjct: 112 ELKLALFIFMWYPKTQ 127


>IMGA|Medtr8g112530.1 TB2/DP1 and HVA22 related protein
           chr08_pseudomolecule_IMGAG_V3 25283646-25281645 E
           EGN_Mt090430 20090702
          Length = 173

 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 2/87 (2%)

Query: 16  IFGYAYPAYECYKTVEKNKPEIEHLRFWCQYWILVAVLTVCERIGDAFISWVPMYSEAKL 75
           +    YP Y   + +E   P  +    W  YW+L +++T+ E      + W+P++  AKL
Sbjct: 26  VISLVYPLYASVRAIESKSPVDDQQ--WLTYWVLYSLITLFELTFAKILEWIPIWPYAKL 83

Query: 76  AFIIYLWYPKTKGTTYVYDSFFKPYVA 102
               +L  P   G  YVY+ + +P++A
Sbjct: 84  ILTCWLVLPYFTGAAYVYEHYVRPFLA 110


>IMGA|Medtr5g099090.1 TB2/DP1 and HVA22 related protein
           chr05_pseudomolecule_IMGAG_V3 39602902-39604230 F
           EGN_Mt090430 20090702
          Length = 157

 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 2/86 (2%)

Query: 21  YPAYECYKTVEKNKPEIEHLRFWCQYWILVAVLTVCERIGDAFISWVPMYSEAKLAFIIY 80
           YP Y   + +E   P     + W  YW+L + +T+ E      + W P++   KL F I+
Sbjct: 23  YPLYASMRAIES--PSTLDDQQWLTYWVLYSFITLFELSTYKVLYWFPIWPYMKLVFCIW 80

Query: 81  LWYPKTKGTTYVYDSFFKPYVAKHEN 106
           L  P   G  Y+Y+++ + YV K  N
Sbjct: 81  LVLPMFNGAAYIYENYARTYVKKFGN 106


>IMGA|Medtr3g150830.1 TB2/DP1 and HVA22 related protein
           chr03_pseudomolecule_IMGAG_V3 39807506-39808807 F
           EGN_Mt090430 20090702
          Length = 154

 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 5/106 (4%)

Query: 3   CCIQTNHLICGRMIFGYAYPAYECYKTVEK-NKPEIEHLRFWCQYWILVAVLTVCERIGD 61
             I   H + G ++    YP Y     +E  +K + E    W  YWI+ + LT+ E +  
Sbjct: 6   TLITQLHSLAGPVV-TLLYPLYASVVAIESPSKLDDEQ---WLAYWIIYSFLTLGEMLMQ 61

Query: 62  AFISWVPMYSEAKLAFIIYLWYPKTKGTTYVYDSFFKPYVAKHENE 107
             + W+P++ + KL    +L  P+  G  Y+Y+ F + ++ K+  E
Sbjct: 62  PALEWIPIWYDVKLLVAAWLVLPQFMGAAYLYERFVRDHIRKYVTE 107