Jatropha Genome Database

JcCB0339221.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0339221.10 + phase: 0 
         (172 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g080160.1 K+ potassium transporter chr05_pseudomolecu...    69   1e-12
IMGA|Medtr5g079940.1 K+ potassium transporter chr05_pseudomolecu...    68   2e-12
IMGA|Medtr5g035830.1 K+ potassium transporter chr05_pseudomolecu...    53   8e-08
IMGA|Medtr5g035830.2 K+ potassium transporter chr05_pseudomolecu...    53   9e-08
IMGA|Medtr4g136710.1 K+ potassium transporter chr04_pseudomolecu...    51   3e-07

>IMGA|Medtr5g080160.1 K+ potassium transporter
           chr05_pseudomolecule_IMGAG_V3 29971199-29969293 H
           EGN_Mt090430 20090702
          Length = 229

 Score = 68.6 bits (166), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 36/54 (66%), Positives = 39/54 (72%), Gaps = 5/54 (9%)

Query: 73  QQLYKRT-----LLLAYQSFGVVYGDLCTSPLYVYKSTFSGSLRLYEEDHEIFG 121
            Q  KRT     L LAYQS GVVYGDL TSPLYVYK++FSG L L E+D EIFG
Sbjct: 14  HQNLKRTSCLNVLTLAYQSLGVVYGDLSTSPLYVYKTSFSGKLSLKEDDEEIFG 67


>IMGA|Medtr5g079940.1 K+ potassium transporter
           chr05_pseudomolecule_IMGAG_V3 29865185-29869504 H
           EGN_Mt090430 20090702
          Length = 738

 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 32/44 (72%), Positives = 35/44 (79%)

Query: 78  RTLLLAYQSFGVVYGDLCTSPLYVYKSTFSGSLRLYEEDHEIFG 121
             L LAYQS GVVYGDL TSPLYVYK++FSG L L E+D EIFG
Sbjct: 9   NVLTLAYQSLGVVYGDLSTSPLYVYKTSFSGKLSLKEDDEEIFG 52


>IMGA|Medtr5g035830.1 K+ potassium transporter
           chr05_pseudomolecule_IMGAG_V3 14857826-14863417 E
           EGN_Mt090430 20090702
          Length = 782

 Score = 52.8 bits (125), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 31/46 (67%)

Query: 76  YKRTLLLAYQSFGVVYGDLCTSPLYVYKSTFSGSLRLYEEDHEIFG 121
           ++  L LAYQS GVVYGDL  SPLYV++STF   +     + EI+G
Sbjct: 17  WRTVLTLAYQSLGVVYGDLSISPLYVFRSTFGEGIGHSNTNEEIYG 62


>IMGA|Medtr5g035830.2 K+ potassium transporter
           chr05_pseudomolecule_IMGAG_V3 14857826-14858753 E
           EGN_Mt090430 20090702
          Length = 202

 Score = 52.8 bits (125), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 31/46 (67%)

Query: 76  YKRTLLLAYQSFGVVYGDLCTSPLYVYKSTFSGSLRLYEEDHEIFG 121
           ++  L LAYQS GVVYGDL  SPLYV++STF   +     + EI+G
Sbjct: 17  WRTVLTLAYQSLGVVYGDLSISPLYVFRSTFGEGIGHSNTNEEIYG 62


>IMGA|Medtr4g136710.1 K+ potassium transporter
           chr04_pseudomolecule_IMGAG_V3 33467802-33472029 H
           EGN_Mt090430 20090702
          Length = 783

 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 54/147 (36%), Gaps = 57/147 (38%)

Query: 79  TLLLAYQSFGVVYGDLCTSPLYVYKSTF-------------------------------- 106
           TL LA+QS G++YGD+ TSPLYVY STF                                
Sbjct: 37  TLSLAFQSLGIIYGDIGTSPLYVYDSTFPDGISNKQDLLGCLSLIIYTISLIVFVKYILV 96

Query: 107 ---------SGSLRLYE----------------EDHEIFGPTKESKTSLLIKEFFEXXXX 141
                     G+  LY                 ED EI     E+++   IK   E    
Sbjct: 97  VLWANDNGNGGTCALYSLICRHSKVSLIPNHQPEDIEISHYKLETRSRQKIKHKLENSKF 156

Query: 142 XXXXXXXXXXXGTSMVIGDGILTPTMS 168
                       T+MVIGDGILTP++S
Sbjct: 157 AKLFLFIVTIMATAMVIGDGILTPSIS 183