Jatropha Genome Database

JcCB0336621.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0336621.10 - phase: 0 /partial
         (140 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g096580.1 RhoGAP; Pleckstrin homology-type chr05_pseu...   270   2e-73
IMGA|Medtr3g149080.1 RhoGAP; Pleckstrin homology-type chr03_pseu...   194   2e-50
IMGA|Medtr5g075000.1 RhoGAP; Pleckstrin homology-type chr05_pseu...   184   9e-48

>IMGA|Medtr5g096580.1 RhoGAP; Pleckstrin homology-type
           chr05_pseudomolecule_IMGAG_V3 38375642-38385231 E
           EGN_Mt090430 20090702
          Length = 859

 Score =  270 bits (689), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 128/137 (93%), Positives = 134/137 (97%)

Query: 3   SALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETSEDLYEW 62
           S LPQRGGEVN+TLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETSEDL+EW
Sbjct: 44  STLPQRGGEVNMTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETSEDLFEW 103

Query: 63  KTALEHALAQAPSAALVMGHNGIFRSDTNEAIEGSFHQWRDKRPVKSLVVGRPILLALED 122
           KTALE ALAQAPSAALVMGHNGIFR+DT ++I+GSFHQWRDKRPVKSLVVGRPILLALED
Sbjct: 104 KTALEQALAQAPSAALVMGHNGIFRNDTTDSIDGSFHQWRDKRPVKSLVVGRPILLALED 163

Query: 123 IDGGPSFLEKALRFLEK 139
           IDGGPSFLEKALRFLEK
Sbjct: 164 IDGGPSFLEKALRFLEK 180


>IMGA|Medtr3g149080.1 RhoGAP; Pleckstrin homology-type
           chr03_pseudomolecule_IMGAG_V3 38918438-38926130 H
           EGN_Mt090430 20090702
          Length = 743

 Score =  194 bits (492), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 93/137 (67%), Positives = 111/137 (81%)

Query: 3   SALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETSEDLYEW 62
           +A+  +G EVNLTLGGIDLNNSGSV+V+ DKKLLTV FPDG +GRAFTLKAET+EDLYEW
Sbjct: 76  NAISPKGNEVNLTLGGIDLNNSGSVIVKADKKLLTVQFPDGHEGRAFTLKAETTEDLYEW 135

Query: 63  KTALEHALAQAPSAALVMGHNGIFRSDTNEAIEGSFHQWRDKRPVKSLVVGRPILLALED 122
           K ALE AL +APSAA  M  NGIFR+D  ++I+ S  Q  +K P KS V+G PILLALED
Sbjct: 136 KIALEKALEKAPSAANGMEQNGIFRNDQTDSIDISLDQLHEKEPAKSTVIGLPILLALED 195

Query: 123 IDGGPSFLEKALRFLEK 139
           +DG P+FLEKAL F+E+
Sbjct: 196 VDGSPTFLEKALTFIEE 212


>IMGA|Medtr5g075000.1 RhoGAP; Pleckstrin homology-type
           chr05_pseudomolecule_IMGAG_V3 27198048-27211234 H
           EGN_Mt090430 20090702
          Length = 947

 Score =  184 bits (468), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 89/135 (65%), Positives = 107/135 (79%)

Query: 5   LPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETSEDLYEWKT 64
           +PQ+G E NLTLGGIDLNNSGSV ++ DKKLLTV FP+  DGR  TLKAET+EDLYEWKT
Sbjct: 96  VPQKGNEANLTLGGIDLNNSGSVSIKADKKLLTVQFPNVHDGRVLTLKAETTEDLYEWKT 155

Query: 65  ALEHALAQAPSAALVMGHNGIFRSDTNEAIEGSFHQWRDKRPVKSLVVGRPILLALEDID 124
           ALE+ LA APSA  VMG +GIFRS   ++++    Q +DK  V   V+GRPILLALE++D
Sbjct: 156 ALENVLAHAPSATNVMGQSGIFRSYQADSLDIYLDQLKDKETVNYAVLGRPILLALEEVD 215

Query: 125 GGPSFLEKALRFLEK 139
           G PSFLEKALRF+E+
Sbjct: 216 GTPSFLEKALRFIEE 230