Jatropha Genome Database

JcCB0335551.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0335551.10 - phase: 1 /partial
         (226 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g089260.1 Alpha-1,4-glucan-protein synthase (UDP-form...   357   3e-99
IMGA|Medtr5g048590.1 Alpha-1,4-glucan-protein synthase (UDP-form...   252   1e-67

>IMGA|Medtr7g089260.1 Alpha-1,4-glucan-protein synthase
           (UDP-forming) chr07_pseudomolecule_IMGAG_V3
           19564226-19562669 F EGN_Mt090430 20090702
          Length = 347

 Score =  357 bits (915), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 163/224 (72%), Positives = 190/224 (84%)

Query: 1   NLTAPATPYFFNTLYDPYREGADFVRGYPFSLRNGVACALSCGLWLNLADFDAPTQALKP 60
           NL  PATP+FFNTLYDP+R+GADFVRGYPFSLR+GV CALSCGLWLNLAD DAPTQALKP
Sbjct: 123 NLKTPATPFFFNTLYDPFRKGADFVRGYPFSLRSGVDCALSCGLWLNLADLDAPTQALKP 182

Query: 61  GQRNSRYVDAVMTVPARAMMPISGINIAFDREXXXXXXXXXXXXXXXXXXRWETMEDIWS 120
            QRNSRYVDAV+TVP RAM+P+SGINIAF+RE                  RWET+EDIW 
Sbjct: 183 TQRNSRYVDAVLTVPTRAMLPVSGINIAFNRELVGPALVPALVLAGEGKLRWETVEDIWC 242

Query: 121 GMCVKVVCDHLGLGVKSGLPYVWRKDRGNAIDSLKKEWEGMKLMEEVVPFFQSVRLPRTA 180
           G+CVK+VCDHL LGVKSGLPYVWR +RGNAIDSLKKEWEG+KLME+VVPFFQSV+LP++A
Sbjct: 243 GLCVKIVCDHLSLGVKSGLPYVWRNERGNAIDSLKKEWEGVKLMEDVVPFFQSVKLPQSA 302

Query: 181 ATAEDCVIEIATAVKQQLGPLDPVFTRAGEAMFEWIKIWKAHGS 224
            TAEDCVIE+A +VK+QLG +DP+F +A +AM EW+K+WK+ GS
Sbjct: 303 TTAEDCVIEMAKSVKEQLGKVDPMFLKAADAMAEWVKLWKSVGS 346


>IMGA|Medtr5g048590.1 Alpha-1,4-glucan-protein synthase
           (UDP-forming) chr05_pseudomolecule_IMGAG_V3
           20550596-20553315 F EGN_Mt090430 20090702
          Length = 362

 Score =  252 bits (643), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 112/219 (51%), Positives = 154/219 (70%), Gaps = 3/219 (1%)

Query: 1   NLTAPATPYFFNTLYDPYREGADFVRGYPFSLRNGVACALSCGLWLNLADFDAPTQALKP 60
           NL +P+TP+FFNTLYDPYR+GADFVRGYPFSLR GV  A+S GLWLN+ D+DAPTQ +KP
Sbjct: 126 NLLSPSTPFFFNTLYDPYRDGADFVRGYPFSLREGVPTAVSHGLWLNIPDYDAPTQLVKP 185

Query: 61  GQRNSRYVDAVMTVPARAMMPISGINIAFDREXXXXXXXXXXXXXXXXXXRWETMEDIWS 120
            +RN+R+VDAVMT+P   + P+ G+N+AFDRE                  R+   +D+W+
Sbjct: 186 HERNTRFVDAVMTIPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRY---DDMWA 242

Query: 121 GMCVKVVCDHLGLGVKSGLPYVWRKDRGNAIDSLKKEWEGMKLMEEVVPFFQSVRLPRTA 180
           G C+KV+CDHLGLGVK+GLPY+W     N   +LKKE++G+   EE++PFFQ+  L +  
Sbjct: 243 GWCIKVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEEIIPFFQAATLSKDC 302

Query: 181 ATAEDCVIEIATAVKQQLGPLDPVFTRAGEAMFEWIKIW 219
            + + C IE++  VK++LG +DP F +  +AM  WI+ W
Sbjct: 303 TSVQKCYIELSKQVKEKLGTIDPYFVKLADAMVTWIEAW 341