Jatropha Genome Database

JcCB0333431.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0333431.10 - phase: 0 /pseudo/partial
         (352 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g100110.1 Phospholipase D/Transphosphatidylase; Pleck...   496   e-141

>IMGA|Medtr1g100110.1 Phospholipase D/Transphosphatidylase;
           Pleckstrin homology-type chr01_pseudomolecule_IMGAG_V3
           20665204-20675194 E EGN_Mt090430 20090702
          Length = 1020

 Score =  496 bits (1278), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 239/323 (73%), Positives = 274/323 (84%), Gaps = 2/323 (0%)

Query: 5   QVKEWLHSLGIVDHHVAAVQDEDEPDDGGFPLNQEESVRNRNVPSVAALPIFRPALGGQQ 64
           QVKEWLHSLGIVD  V  VQD++EPDDG  P++ E+SV+NR VPSVAAL I RP+LGGQQ
Sbjct: 52  QVKEWLHSLGIVDQMVM-VQDDEEPDDGAIPIHHEDSVKNRYVPSVAALSIIRPSLGGQQ 110

Query: 65  AI-DKAKVAMQNYLNHFLGNMDIVNSREVCKFLEVSKLSFSREYGPKLKEGYVMAKHLSN 123
           ++ D+AKVAMQNYLN FLGN++IVNSREVCKFLEVSKLSF +EYGPKL+EGYV  KHLSN
Sbjct: 111 SVADRAKVAMQNYLNLFLGNLEIVNSREVCKFLEVSKLSFLQEYGPKLREGYVTVKHLSN 170

Query: 124 ISDNGDIRCCPCSLFDCCSDNWEKVWAVLKPGFLALLEDHFDTKLLDIIVFDILPTSTGS 183
           IS + D+ C P   F  C +NW KVWAVLKPGFLALL+D FD K LDII+FD+LP+STG 
Sbjct: 171 ISQDSDVTCFPFHWFHFCDNNWTKVWAVLKPGFLALLDDPFDNKPLDIIMFDVLPSSTGK 230

Query: 184 KGSQVYIANQIKERNPLRYSFKVSSGSKSIKLRTTSSGKVKEWVAAINDAGLRPLEGWCH 243
             ++VY+A   KERNPLR++FKV+SG++SI LRT SS KVK WV AIN+AGLRPLEGWC 
Sbjct: 231 GETKVYLAEPTKERNPLRFTFKVTSGNRSICLRTISSAKVKTWVTAINEAGLRPLEGWCS 290

Query: 244 PHRFGSFSPLRGLTDDGSQAQWFVDGQAAFEAIASAIENAKSEIFITGWWLCPELYLRRP 303
           PHRFGSF+P+RGLT DGSQAQWFVDGQAAFEAIAS+I++AKSEIFITGWWLCPELYLRRP
Sbjct: 291 PHRFGSFAPIRGLTGDGSQAQWFVDGQAAFEAIASSIQDAKSEIFITGWWLCPELYLRRP 350

Query: 304 FRSHSISRLDSLLEAKAKQGVQA 326
           F S    RLDSLLE KAKQGVQ 
Sbjct: 351 FDSFPTFRLDSLLEEKAKQGVQV 373