Jatropha Genome Database

JcCB0333061.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0333061.10 - phase: 0 /pseudo/partial
         (263 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g029610.1 Phosphatidate cytidylyltransferase chr02_ps...   283   4e-77
IMGA|Medtr5g101250.1 Phosphatidate cytidylyltransferase chr05_ps...   278   3e-75

>IMGA|Medtr2g029610.1 Phosphatidate cytidylyltransferase
           chr02_pseudomolecule_IMGAG_V3 7934897-7928681 F
           EGN_Mt090430 20090702
          Length = 426

 Score =  283 bits (725), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 131/174 (75%), Positives = 149/174 (85%)

Query: 90  SISCNYDLSLCANILGRFQWLTCPRKDLSTGWLQCDPGPLFKPEYYSLPGWMSNWFPRKE 149
           S++      + ANI+GR QWLTCPRKDLSTGWL CDPG LFKPE YSL GW  +WFP KE
Sbjct: 253 SVTTIISAFMLANIMGRSQWLTCPRKDLSTGWLDCDPGFLFKPESYSLLGWTPHWFPWKE 312

Query: 150 ISILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGFTDRMDCQMIM 209
           ISILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGG TDRMDCQM+M
Sbjct: 313 ISILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGLTDRMDCQMVM 372

Query: 210 AVFAYIYHQSFVIPRDYSVEMILDQIMASLTLEEQQILFRKLGQIFQERQLRLH 263
           AVFAYIYHQSFV+P+  SVEMILDQI+ SL+ EEQ+ L+R+LG++ Q+   R++
Sbjct: 373 AVFAYIYHQSFVVPQSLSVEMILDQILMSLSFEEQEALYRRLGEVLQQGIQRMY 426


>IMGA|Medtr5g101250.1 Phosphatidate cytidylyltransferase
           chr05_pseudomolecule_IMGAG_V3 40510892-40507943 H
           EGN_Mt090430 20090702
          Length = 425

 Score =  278 bits (710), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 123/160 (76%), Positives = 141/160 (88%)

Query: 101 ANILGRFQWLTCPRKDLSTGWLQCDPGPLFKPEYYSLPGWMSNWFPRKEISILPVQWHAL 160
           AN LGRF WLTCPRKDLSTGWL+CDP P+FKPEY  +PG++S+W P KEI++LPVQWHAL
Sbjct: 263 ANFLGRFNWLTCPRKDLSTGWLECDPDPIFKPEYIPMPGFVSHWIPEKEIAVLPVQWHAL 322

Query: 161 CLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGFTDRMDCQMIMAVFAYIYHQSF 220
            LGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGFTDRMDCQM+MAVF YIYHQSF
Sbjct: 323 WLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGFTDRMDCQMVMAVFVYIYHQSF 382

Query: 221 VIPRDYSVEMILDQIMASLTLEEQQILFRKLGQIFQERQL 260
           ++P DY+++++LDQIM  L  EEQ  L+ +LGQI  ERQL
Sbjct: 383 IVPHDYTIDVLLDQIMRDLGFEEQLALYTRLGQILHERQL 422