Jatropha Genome Database

JcCB0332771.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0332771.10 + phase: 0 /partial
         (204 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g139220.1 ATPase, E1-E2 type chr03_pseudomolecule_IMG...    64   5e-11
IMGA|Medtr2g041260.1 Cof protein; Heavy metal translocating P-ty...    63   1e-10
IMGA|Medtr5g019330.1 ATPase, E1-E2 type chr05_pseudomolecule_IMG...    53   8e-08
IMGA|Medtr8g012740.1 Copper-translocating P-type ATPase; Heavy m...    51   4e-07

>IMGA|Medtr3g139220.1 ATPase, E1-E2 type
           chr03_pseudomolecule_IMGAG_V3 35762621-35752738 E
           EGN_Mt090430 20090702
          Length = 892

 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 66/129 (51%), Gaps = 19/129 (14%)

Query: 31  ARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPI-YGHKVGKKHADVTSCC 89
           A+KG+L++GG VL+ LA  + IA DKTGTLT G  +  AI  I YG              
Sbjct: 533 AKKGLLIRGGDVLERLAGVNYIALDKTGTLTRGKPVVSAIGSIHYG-------------- 578

Query: 90  TPNCEKEALAVAAAMEKGTTHPIGRAVVDHSIGKDLPCVSVENFEYFPGRGLTATLNNME 149
               E E L +AAA+EK  +HPI +A+++ +   +L     +     PG G  A ++   
Sbjct: 579 ----ESEILHIAAAVEKTASHPIAKAIINKAESLELVLPPTKGQIVEPGFGTLAEIDGRL 634

Query: 150 SGAGSIKLL 158
              GS++ +
Sbjct: 635 VAVGSLEWV 643


>IMGA|Medtr2g041260.1 Cof protein; Heavy metal translocating P-type
           ATPase chr02_pseudomolecule_IMGAG_V3 11303254-11308060 E
           EGN_Mt090430 20090702
          Length = 829

 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 23/151 (15%)

Query: 1   IYRALGLMVAASPCXXXXXXXXXXX-XISSCARKGILLKGGQVLDALASCHTIAFDKTGT 59
            + AL ++++  PC             ++  A  G+LLKGG  L+ L+   T+AFDKTGT
Sbjct: 335 FHLALVVLLSGCPCALILSTPVAIFCALTKAAISGLLLKGGDYLETLSRIKTVAFDKTGT 394

Query: 60  LTTGGLMFKAIEPIYGHKVGKKHADVTSCCTPNCEKEALAVAAAMEKGTTHPIGRAVVD- 118
           +T G   F   +   G  +                +  L   +++E  ++HP+  A+VD 
Sbjct: 395 ITRGE--FSVTDFSAGDDINN--------------ETLLYWISSIESKSSHPVAGALVDY 438

Query: 119 ---HSIGKDLPCVSVENFEYFPGRGLTATLN 146
              HSI K +P  +VENF+ FPG G+  T++
Sbjct: 439 ARLHSI-KPVP-ENVENFQNFPGEGIFGTID 467


>IMGA|Medtr5g019330.1 ATPase, E1-E2 type
           chr05_pseudomolecule_IMGAG_V3 7188179-7189034 H
           EGN_Mt090430 20090702
          Length = 132

 Score = 53.1 bits (126), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 24/38 (63%), Positives = 32/38 (84%)

Query: 166 EFITSRCKSEAESRKIKEAVNASSYGSDLVHAALSVDE 203
           +FITS C+SE ES+KIKEA+NA S GS+ VHA LS+++
Sbjct: 20  DFITSFCQSEDESKKIKEAINAPSQGSEFVHATLSINK 57


>IMGA|Medtr8g012740.1 Copper-translocating P-type ATPase; Heavy
           metal translocating P-type ATPase
           chr08_pseudomolecule_IMGAG_V3 2237132-2243382 E
           EGN_Mt090430 20090702
          Length = 957

 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 72/168 (42%), Gaps = 30/168 (17%)

Query: 4   ALGLMVAASPCXXXXXXXXXXXXISSC-ARKGILLKGGQVLDALASCHTIAFDKTGTLTT 62
           A+ ++V A PC             S   A +G+L+KGG  L+      TI FDKTGTLT 
Sbjct: 579 AISVLVVACPCALGLATPTAVMVASGIGASQGVLIKGGDALEKAHKVKTIVFDKTGTLTI 638

Query: 63  GGLMFKAIEPIYGHKVGKKHADVTSCCTPNCEKEAL-AVAAAMEKGTTHPIGRAVVDH-- 119
           G                 K   V++        E L  +A ++E  + HPI +AVV H  
Sbjct: 639 G-----------------KPEVVSAVLLSEFSMEVLCDMAISVEANSEHPIAKAVVAHAK 681

Query: 120 -------SIGKDLPCVSVENFEYFPGRGLTATLNNMESGAGSIKLLKA 160
                  S  +++P   V +FE   G G++  + +     G+ +L+ A
Sbjct: 682 KLRKNFGSCPEEVP--DVVDFEVHMGAGVSGKVGDRTVLVGNKRLMHA 727