Jatropha Genome Database

JcCB0331501.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0331501.10 + phase: 0 /partial
         (84 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g083430.1 Transcription factor, K-box chr07_pseudomol...   127   2e-30
IMGA|Medtr3g104190.1 Transcription factor, MADS-box; Transcripti...    79   7e-16
IMGA|Medtr4g147260.1 Transcription factor, MADS-box; Transcripti...    79   7e-16
IMGA|Medtr1g129880.1 Transcription factor, MADS-box; Transcripti...    77   2e-15
IMGA|Medtr7g014840.1 Transcription factor, MADS-box; Transcripti...    75   6e-15
IMGA|Medtr8g077590.1 Transcription factor, MADS-box; Transcripti...    67   3e-12
IMGA|Medtr7g014850.1 Transcription factor, MADS-box; Transcripti...    60   3e-10
IMGA|Medtr5g049070.1 Transcription factor, MADS-box; Transcripti...    55   7e-09
IMGA|Medtr3g013050.1 Transcription factor, MADS-box; Transcripti...    53   3e-08
IMGA|Medtr2g010020.1 Transcription factor, K-box chr02_pseudomol...    53   5e-08
IMGA|Medtr5g049080.1 Transcription factor, K-box chr05_pseudomol...    52   6e-08
IMGA|Medtr5g032500.2 Transcription factor, K-box chr05_pseudomol...    51   1e-07
IMGA|Medtr4g136380.1 Transcription factor, MADS-box; Transcripti...    51   1e-07
IMGA|Medtr5g032500.1 Transcription factor, K-box chr05_pseudomol...    51   1e-07
IMGA|Medtr5g075960.1 Transcription factor, K-box chr05_pseudomol...    48   1e-06
IMGA|Medtr4g121680.1 Transcription factor, K-box chr04_pseudomol...    48   2e-06

>IMGA|Medtr7g083430.1 Transcription factor, K-box
          chr07_pseudomolecule_IMGAG_V3 17802338-17805458 H
          EGN_Mt090430 20090702
          Length = 211

 Score =  127 bits (318), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 64/83 (77%), Positives = 72/83 (86%), Gaps = 1/83 (1%)

Query: 3  KTLERYQRCCFTPQ-DNSIERETQSWYQEVAKLKAKYESLQRTQRHLLGEDLGPLSVKEL 61
          KTLERYQRC FT Q DN  E ETQ+WYQE++KLKAKYESLQ++QR LLGEDLGPL++KEL
Sbjct: 8  KTLERYQRCSFTSQNDNVNEHETQNWYQEMSKLKAKYESLQKSQRQLLGEDLGPLNMKEL 67

Query: 62 QNLEKQLEGALALARQRKVFICL 84
          QNLEKQLEGALA ARQRK  I +
Sbjct: 68 QNLEKQLEGALAQARQRKTQIMV 90


>IMGA|Medtr3g104190.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr03_pseudomolecule_IMGAG_V3
           25812647-25808917 E EGN_Mt090430 20090702
          Length = 246

 Score = 78.6 bits (192), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 43/75 (57%), Positives = 56/75 (74%), Gaps = 5/75 (6%)

Query: 3   KTLERYQRCCF-TPQDNSIERETQ----SWYQEVAKLKAKYESLQRTQRHLLGEDLGPLS 57
           KTLERYQ+C +  P+ N+  +E      S  QE  KLKA+YESLQRTQR+L+GEDLGPLS
Sbjct: 65  KTLERYQKCNYGAPEANAHSKEALVLELSSQQEYLKLKARYESLQRTQRNLMGEDLGPLS 124

Query: 58  VKELQNLEKQLEGAL 72
            K+L+ LE+QL+ +L
Sbjct: 125 SKDLETLERQLDSSL 139


>IMGA|Medtr4g147260.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr04_pseudomolecule_IMGAG_V3
           36883844-36877638 E EGN_Mt090430 20090702
          Length = 241

 Score = 78.6 bits (192), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 43/73 (58%), Positives = 56/73 (76%), Gaps = 3/73 (4%)

Query: 3   KTLERYQRCCF-TPQDNSIERETQ--SWYQEVAKLKAKYESLQRTQRHLLGEDLGPLSVK 59
           KTLERYQ+C +  P+ N   RE    S  QE  KLKA+YE+LQR+QR+L+GEDLGPLS K
Sbjct: 65  KTLERYQKCNYGAPETNVSAREALELSSQQEYLKLKARYEALQRSQRNLMGEDLGPLSSK 124

Query: 60  ELQNLEKQLEGAL 72
           EL++LE+QL+ +L
Sbjct: 125 ELESLERQLDSSL 137


>IMGA|Medtr1g129880.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr01_pseudomolecule_IMGAG_V3
           29094866-29091202 E EGN_Mt090430 20090702
          Length = 239

 Score = 77.4 bits (189), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 39/82 (47%), Positives = 57/82 (69%), Gaps = 3/82 (3%)

Query: 2   TKTLERYQRCCFTPQDNSI---ERETQSWYQEVAKLKAKYESLQRTQRHLLGEDLGPLSV 58
            K +E+Y++CCF     +    E E+Q  YQE+  L+ K+ESL RTQR+ LGE++  LS+
Sbjct: 63  NKIIEKYRQCCFNNMSENGYLGEHESQGLYQELLMLRVKHESLARTQRNFLGEEINALSI 122

Query: 59  KELQNLEKQLEGALALARQRKV 80
           K+LQ+LEKQLE  LA AR+ ++
Sbjct: 123 KDLQSLEKQLERTLAQARKHQM 144


>IMGA|Medtr7g014840.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr07_pseudomolecule_IMGAG_V3
           3593718-3599199 E EGN_Mt090430 20090702
          Length = 245

 Score = 75.5 bits (184), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 41/83 (49%), Positives = 57/83 (68%), Gaps = 1/83 (1%)

Query: 3   KTLERYQRCCFTPQDNS-IERETQSWYQEVAKLKAKYESLQRTQRHLLGEDLGPLSVKEL 61
           KTL+RYQ+C +   + S   +E +S Y+E  KLK ++E+LQR QR+LLGEDLGPLS K+L
Sbjct: 65  KTLDRYQKCSYGAVEVSKPAKELESSYREYLKLKQRFENLQRAQRNLLGEDLGPLSSKDL 124

Query: 62  QNLEKQLEGALALARQRKVFICL 84
           + LE+QL+ +L   R  K    L
Sbjct: 125 EQLERQLDSSLKQVRSTKTQFML 147


>IMGA|Medtr8g077590.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr08_pseudomolecule_IMGAG_V3
           15487044-15481223 E EGN_Mt090430 20090702
          Length = 240

 Score = 66.6 bits (161), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/79 (49%), Positives = 54/79 (68%), Gaps = 2/79 (2%)

Query: 3   KTLERYQRCCFTP-QDNSIERETQ-SWYQEVAKLKAKYESLQRTQRHLLGEDLGPLSVKE 60
           K LERY+R  +   Q  + + E+Q +W  E  +LKAK + LQR  RH +GEDLG +S+KE
Sbjct: 65  KILERYERYSYAERQLVANDSESQGNWTIEYTRLKAKIDLLQRNYRHYMGEDLGSMSLKE 124

Query: 61  LQNLEKQLEGALALARQRK 79
           LQ+LE+QL+ AL L R R+
Sbjct: 125 LQSLEQQLDTALKLIRTRR 143


>IMGA|Medtr7g014850.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr07_pseudomolecule_IMGAG_V3
           3615380-3622271 E EGN_Mt090430 20090702
          Length = 256

 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/75 (45%), Positives = 45/75 (60%)

Query: 5   LERYQRCCFTPQDNSIERETQSWYQEVAKLKAKYESLQRTQRHLLGEDLGPLSVKELQNL 64
           LERY+R   T    +      +W  E  KL AK + L+R  R+ +G DL PLSVKELQ+L
Sbjct: 67  LERYERQNHTELTGATNETQGNWSFEYMKLTAKVQVLERNLRNFVGNDLDPLSVKELQSL 126

Query: 65  EKQLEGALALARQRK 79
           E+QL+ +L   R RK
Sbjct: 127 EQQLDTSLKRIRTRK 141


>IMGA|Medtr5g049070.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr05_pseudomolecule_IMGAG_V3
           20888794-20881921 E EGN_Mt090430 20090702
          Length = 301

 Score = 55.5 bits (132), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 4/78 (5%)

Query: 5   LERYQRCCFTPQ---DNSIERETQSWYQEVAKLKAKYESLQRTQRHLLGEDLGPLSVKEL 61
           LER++R  +  +    N  + + ++W  E  +LKAK E LQR  RH +GE+L  +S+KEL
Sbjct: 67  LERHERYGYAERLLVGNDTDTQ-ENWTMEYTRLKAKVELLQRNHRHYMGEELDSMSLKEL 125

Query: 62  QNLEKQLEGALALARQRK 79
           Q LE+QL+  L   R RK
Sbjct: 126 QCLEQQLDTGLKNIRTRK 143


>IMGA|Medtr3g013050.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr03_pseudomolecule_IMGAG_V3
           2348300-2341992 E EGN_Mt090430 20090702
          Length = 223

 Score = 53.1 bits (126), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 2/78 (2%)

Query: 4   TLERYQRCCFTPQDNSIERETQSWY--QEVAKLKAKYESLQRTQRHLLGEDLGPLSVKEL 61
           T++RY++ C      +   E  + Y  QE AKL+ + + LQ + RHL+G+ L  L+VKEL
Sbjct: 65  TIDRYKKACSDHSSTTTTTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDALSTLTVKEL 124

Query: 62  QNLEKQLEGALALARQRK 79
           + LE +LE  +   R +K
Sbjct: 125 KQLENRLERGITRIRSKK 142


>IMGA|Medtr2g010020.1 Transcription factor, K-box
          chr02_pseudomolecule_IMGAG_V3 2311955-2312917 H
          EGN_Mt090430 20090702
          Length = 121

 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 2/76 (2%)

Query: 8  YQRCCFTPQDNSIERETQSWYQEVAKLKAKYESLQRTQRHLLGEDLGPLSVKELQNLEKQ 67
          Y R  +    N+I    Q W  E A L+ + + LQ + R L+GE L  L +KELQNLE Q
Sbjct: 5  YTRIIWENHHNAII--LQFWQTEAATLRQQLQYLQESHRQLMGEGLSGLGIKELQNLENQ 62

Query: 68 LEGALALARQRKVFIC 83
          LE +L   R +K  I 
Sbjct: 63 LEISLKGVRMKKDHIL 78


>IMGA|Medtr5g049080.1 Transcription factor, K-box
          chr05_pseudomolecule_IMGAG_V3 20901480-20897129 H
          EGN_Mt090430 20090702
          Length = 128

 Score = 52.4 bits (124), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 25/53 (47%), Positives = 38/53 (71%)

Query: 28 YQEVAKLKAKYESLQRTQRHLLGEDLGPLSVKELQNLEKQLEGALALARQRKV 80
          YQE  KLK+K E+LQ+TQR++LGE+L  L + EL+ +E+Q++ +L   R  K 
Sbjct: 5  YQEYIKLKSKVEALQQTQRNILGEELEQLDINELEQIERQVDSSLKTIRSNKT 57


>IMGA|Medtr5g032500.2 Transcription factor, K-box
          chr05_pseudomolecule_IMGAG_V3 13163679-13160585 E
          EGN_Mt090430 20090702
          Length = 169

 Score = 51.2 bits (121), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 43/76 (56%)

Query: 4  TLERYQRCCFTPQDNSIERETQSWYQEVAKLKAKYESLQRTQRHLLGEDLGPLSVKELQN 63
           +ERY  C    Q  + E E + W +E   L+ + +SLQ   R L+GE L  LS++ LQ+
Sbjct: 9  VIERYNICKEDQQVTNPESEVKFWQREADILRQQLQSLQENHRQLMGEQLYGLSIRNLQD 68

Query: 64 LEKQLEGALALARQRK 79
          LE QLE +L   R +K
Sbjct: 69 LESQLELSLQGVRMKK 84


>IMGA|Medtr4g136380.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr04_pseudomolecule_IMGAG_V3
           33294099-33299967 E EGN_Mt090430 20090702
          Length = 251

 Score = 51.2 bits (121), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 47/78 (60%), Gaps = 2/78 (2%)

Query: 4   TLERYQRCCF--TPQDNSIERETQSWYQEVAKLKAKYESLQRTQRHLLGEDLGPLSVKEL 61
           ++ERY++ C   +   ++ E   Q + QE AKL+ +  +LQ   R ++GE L  ++ K+L
Sbjct: 88  SIERYKKACSDSSGAKSASESNVQYYQQEAAKLRVQISNLQNHNRQMMGESLSNMNGKDL 147

Query: 62  QNLEKQLEGALALARQRK 79
           +NLE +LE  ++  R +K
Sbjct: 148 RNLESKLEKGISRIRSKK 165


>IMGA|Medtr5g032500.1 Transcription factor, K-box
          chr05_pseudomolecule_IMGAG_V3 13163679-13160585 E
          EGN_Mt090430 20090702
          Length = 183

 Score = 50.8 bits (120), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 43/76 (56%)

Query: 4  TLERYQRCCFTPQDNSIERETQSWYQEVAKLKAKYESLQRTQRHLLGEDLGPLSVKELQN 63
           +ERY  C    Q  + E E + W +E   L+ + +SLQ   R L+GE L  LS++ LQ+
Sbjct: 9  VIERYNICKEDQQVTNPESEVKFWQREADILRQQLQSLQENHRQLMGEQLYGLSIRNLQD 68

Query: 64 LEKQLEGALALARQRK 79
          LE QLE +L   R +K
Sbjct: 69 LESQLELSLQGVRMKK 84


>IMGA|Medtr5g075960.1 Transcription factor, K-box
          chr05_pseudomolecule_IMGAG_V3 27711235-27721420 E
          EGN_Mt090430 20090702
          Length = 169

 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 37/57 (64%)

Query: 23 ETQSWYQEVAKLKAKYESLQRTQRHLLGEDLGPLSVKELQNLEKQLEGALALARQRK 79
          E + W +E A L+ +  +LQ + R ++GE+L  L+VKELQ LE QLE +L   R +K
Sbjct: 29 EIKFWQREAAMLRQQLHNLQESHRQIMGEELSGLTVKELQGLENQLEISLRGVRMKK 85


>IMGA|Medtr4g121680.1 Transcription factor, K-box
          chr04_pseudomolecule_IMGAG_V3 28617346-28618429 H
          EGN_Mt090430 20090702
          Length = 98

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 37/56 (66%)

Query: 29 QEVAKLKAKYESLQRTQRHLLGEDLGPLSVKELQNLEKQLEGALALARQRKVFICL 84
          +E A L+ + + L  +QR L+G++L  L + ELQ+LE QLE +L   R RKVFI +
Sbjct: 41 KEAASLRQQLQHLNDSQRQLMGQELSGLDLNELQHLESQLEMSLKSIRTRKVFIGI 96