Jatropha Genome Database

JcCB0320291.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0320291.10 - phase: 0 /partial
         (260 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g145580.1 Actin-binding FH2; C2 calcium/lipid-binding...   363   e-101
IMGA|Medtr1g016730.1 Actin-binding FH2; C2 calcium/lipid-binding...   333   7e-92
IMGA|Medtr5g026820.1 C2 calcium/lipid-binding region, CaLB; chr0...   261   3e-70

>IMGA|Medtr8g145580.1 Actin-binding FH2; C2 calcium/lipid-binding
           region, CaLB; chr08_pseudomolecule_IMGAG_V3
           35409574-35425027 E EGN_Mt090430 20090702
          Length = 1180

 Score =  363 bits (932), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 169/262 (64%), Positives = 201/262 (76%), Gaps = 7/262 (2%)

Query: 1   MSLFRKLFYRKPPDGLLEICERVYVFDYCFTVDAWQEENYTSYMSGIVGQLKEHFPDASF 60
           M++ RKLFYRKPPDGLLEIC+RVYVFD CFT +AW EE Y  YM GIVGQL+E+ PDAS 
Sbjct: 1   MAMLRKLFYRKPPDGLLEICDRVYVFDCCFTTEAWNEEKYKVYMDGIVGQLRENVPDASI 60

Query: 61  LVFNFREGEKQSQLSDIMSEYNMTIMEYPRQYEGCPLLRMEVIHHFLRSGESWLSLGVQN 120
           LVFNFRE E +S +++I+SEY++TIM+YPR YEGCP+L+ME+IHHFLRS ESWLSLG  N
Sbjct: 61  LVFNFREEETKSLMANIISEYDITIMDYPRHYEGCPVLKMELIHHFLRSSESWLSLGQHN 120

Query: 121 LLLMHCERGGWPVLAFMLAALLLYRKQFSGEHKTLDMIYRXXXXXXXXXXXXXXXXXXXX 180
           +LLMHCERGGWPV+AFMLAALL+YRK +SGEH+TLDMIYR                    
Sbjct: 121 VLLMHCERGGWPVMAFMLAALLIYRKVYSGEHRTLDMIYRQSPHQLLHLLTPLNPIPSQL 180

Query: 181 RYLQYVSRRNVASEWPPLERALTLECIILRFIPDFDGEGGCRPVFRIYGHGLSYQTTNDV 240
           RYLQYVSRRNVA +WPPL+RAL L+CIILRF P+FDGEGGC P+FRIYG     Q     
Sbjct: 181 RYLQYVSRRNVALDWPPLDRALMLDCIILRFFPNFDGEGGCHPLFRIYG-----QDPFSA 235

Query: 241 CSTPRN--STPRKGETVRNYKQ 260
             +P+   S P++ + VR YKQ
Sbjct: 236 DKSPKMLYSMPKRSKNVRAYKQ 257


>IMGA|Medtr1g016730.1 Actin-binding FH2; C2 calcium/lipid-binding
           region, CaLB; chr01_pseudomolecule_IMGAG_V3
           3303853-3295156 H EGN_Mt090430 20090702
          Length = 1641

 Score =  333 bits (853), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 148/243 (60%), Positives = 183/243 (75%), Gaps = 6/243 (2%)

Query: 20  CERVYVFDYCFTVDAWQEENYTSYMSGIVGQLKEHFPDASFLVFNFREGEKQSQLSDIMS 79
           C R  VFDYCFT D   E+ Y  Y+ GI+ Q++EHFPDASF+VFN REGE QS +S+I+ 
Sbjct: 12  CGRSEVFDYCFTTDVIDEDEYKVYIGGIIRQIREHFPDASFMVFNMREGENQSHISNILC 71

Query: 80  EYNMTIMEYPRQYEGCPLLRMEVIHHFLRSGESWLSLGVQNLLLMHCERGGWPVLAFMLA 139
           +Y+MT+M+YPRQYEGCPLL ME+IHHFLRSGE+WL LG QN++LMHCERGGWPVLAFMLA
Sbjct: 72  DYDMTVMDYPRQYEGCPLLTMEMIHHFLRSGENWLQLGNQNIVLMHCERGGWPVLAFMLA 131

Query: 140 ALLLYRKQFSGEHKTLDMIYRXXXXXXXXXXXXXXXXXXXXRYLQYVSRRNVASEWPPLE 199
           ALL+YRK ++GE KTLDMIY+                    RYLQY+SRRNV SEWPPL+
Sbjct: 132 ALLIYRKMYTGEQKTLDMIYKQAPRELLQLMSPLNPLPSQLRYLQYISRRNVGSEWPPLD 191

Query: 200 RALTLECIILRFIPDFDGEGGCRPVFRIYGHGLSYQTTNDVCSTPRN--STPRKGETVRN 257
           RALTL+C+I+R IP+ DGEGGCRP+FRIYG    +   N    +P+   STP++ + VR+
Sbjct: 192 RALTLDCVIIRQIPNMDGEGGCRPIFRIYGQD-PFIPAN---RSPKVLFSTPKRSKLVRH 247

Query: 258 YKQ 260
           YKQ
Sbjct: 248 YKQ 250


>IMGA|Medtr5g026820.1 C2 calcium/lipid-binding region, CaLB;
           chr05_pseudomolecule_IMGAG_V3 10860241-10855241 E
           EGN_Mt090430 20090702
          Length = 975

 Score =  261 bits (667), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 125/233 (53%), Positives = 168/233 (72%), Gaps = 1/233 (0%)

Query: 1   MSLFRKLFYRKPPDGLLEICERVYVFDYCFTVDAWQEENYTSYMSGIVGQLKEHFPDASF 60
           MSL  + FY++PPDGLLE  +RVYVFD CF+ +A  +  Y  Y+  IV +L E FP++SF
Sbjct: 1   MSLLSRFFYKRPPDGLLEFIDRVYVFDSCFSTEALPDGMYQLYLHEIVTELHEEFPESSF 60

Query: 61  LVFNFREGEKQSQLSDIMSEYNMTIMEYPRQYEGCPLLRMEVIHHFLRSGESWLSLGV-Q 119
           L FNFR+GEK+S  ++IM +Y++ +M+YP+ YEGCPLL + +I HFLR  ESWL LG  Q
Sbjct: 61  LAFNFRDGEKRSNFAEIMCDYDVIVMDYPKNYEGCPLLPLSLIQHFLRVCESWLLLGNHQ 120

Query: 120 NLLLMHCERGGWPVLAFMLAALLLYRKQFSGEHKTLDMIYRXXXXXXXXXXXXXXXXXXX 179
           N++L HCERGGWP+LAF+LA+LL++R+  SGE +TL+M++R                   
Sbjct: 121 NVILFHCERGGWPLLAFLLASLLIFRRVHSGERRTLEMVHREAPKGLLQLLSPLNPQPSQ 180

Query: 180 XRYLQYVSRRNVASEWPPLERALTLECIILRFIPDFDGEGGCRPVFRIYGHGL 232
            RY+QYV+RRN+A EWPP ERAL+L+C+ILR IP FD   GCRP+FRI+G  L
Sbjct: 181 LRYIQYVARRNIAPEWPPPERALSLDCVILRGIPSFDSSNGCRPMFRIFGRNL 233