Jatropha Genome Database

JcCB0318551.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0318551.10 - phase: 0 /partial
         (233 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g065760.1 Cis-homoaconitase; ; ; chr01_pseudomolecule...   367   e-102
IMGA|Medtr1g087350.1 Aconitate hydratase, N-terminal; ; chr01_ps...   290   4e-79
IMGA|Medtr1g065770.1 hypothetical protein chr01_pseudomolecule_I...    90   8e-19

>IMGA|Medtr1g065760.1 Cis-homoaconitase; ; ;
           chr01_pseudomolecule_IMGAG_V3 13193763-13202569 E
           EGN_Mt090430 20090702
          Length = 508

 Score =  367 bits (943), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 169/199 (84%), Positives = 188/199 (94%), Gaps = 1/199 (0%)

Query: 36  KCRKSISKKIV-SVMAPQQSERRPATTGSVKTAMTMTEKILAKASEKPQLSPGENVWVNV 94
           +C K  SK+I  SV APQQ++R+P++TGSVKTAMTMTEKI+AKASEK  ++PG+N+WV+V
Sbjct: 30  RCHKHASKRITCSVAAPQQTQRQPSSTGSVKTAMTMTEKIMAKASEKGHVTPGDNIWVDV 89

Query: 95  DVLMTHDVCGPGSIGIFKKEFGANAKVWDREKIVIIPDHYIFTADERANRNVDILRDFCY 154
           DVLMTHDVCGPGSIGIFKKEFG +AKVWDREK+VIIPDHYIFT+DERANRNVDILRDFC+
Sbjct: 90  DVLMTHDVCGPGSIGIFKKEFGQDAKVWDREKVVIIPDHYIFTSDERANRNVDILRDFCH 149

Query: 155 EQNIKYFYDIKDLSNFKANPDYKGVCHVALAQEGHCRPGEVLLGTDSHTCTAGAFGQFAT 214
           EQ+IKYFYDIKDLSNFK NPDYKGVCH+ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFAT
Sbjct: 150 EQDIKYFYDIKDLSNFKVNPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFAT 209

Query: 215 GIGNTDAGFVLGTGKLLLK 233
           GIGNTDAGFVLG GKLLLK
Sbjct: 210 GIGNTDAGFVLGAGKLLLK 228


>IMGA|Medtr1g087350.1 Aconitate hydratase, N-terminal; ;
           chr01_pseudomolecule_IMGAG_V3 17586332-17579961 H
           EGN_Mt090430 20090702
          Length = 466

 Score =  290 bits (742), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 131/168 (77%), Positives = 149/168 (88%)

Query: 66  TAMTMTEKILAKASEKPQLSPGENVWVNVDVLMTHDVCGPGSIGIFKKEFGANAKVWDRE 125
           T MT TEKILA+ASEKP++ PGEN WVNVDVLM +D+  PG  GIFK+EFG+ AKVWD E
Sbjct: 15  TPMTTTEKILARASEKPEVKPGENAWVNVDVLMINDITCPGVSGIFKREFGSTAKVWDPE 74

Query: 126 KIVIIPDHYIFTADERANRNVDILRDFCYEQNIKYFYDIKDLSNFKANPDYKGVCHVALA 185
           KI++IPDHYIFT DERA+RNVD  R+FC EQ+IKYFYDI+D SNF+AN DYKGVCHVALA
Sbjct: 75  KIIVIPDHYIFTNDERAHRNVDTAREFCMEQDIKYFYDIQDRSNFRANSDYKGVCHVALA 134

Query: 186 QEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKLLLK 233
           QEGHCRPGEVLLGTDSHT +AGAFGQFATG+GNTDA F+LGTGK+LLK
Sbjct: 135 QEGHCRPGEVLLGTDSHTTSAGAFGQFATGVGNTDAAFILGTGKILLK 182


>IMGA|Medtr1g065770.1 hypothetical protein
           chr01_pseudomolecule_IMGAG_V3 13207092-13208848 E
           EGN_Mt090430 20090702
          Length = 109

 Score = 90.1 bits (222), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 40/53 (75%), Positives = 46/53 (86%)

Query: 112 KKEFGANAKVWDREKIVIIPDHYIFTADERANRNVDILRDFCYEQNIKYFYDI 164
           +KE    A VW+ EK+VIIP+HYIFT+DERANRNV ILRDFC+EQNIKYFYDI
Sbjct: 52  EKEKRRRALVWNFEKVVIIPNHYIFTSDERANRNVHILRDFCHEQNIKYFYDI 104