Jatropha Genome Database

JcCB0309941.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0309941.10 + phase: 0 
         (151 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g077510.1 Phosphoglycerate kinase; ; chr02_pseudomole...   158   1e-39
IMGA|Medtr2g077490.1 Phosphoglycerate kinase; ; chr02_pseudomole...   101   1e-22
IMGA|Medtr2g077490.2 Phosphoglycerate kinase; ; chr02_pseudomole...   101   1e-22
IMGA|Medtr2g077480.1 Phosphoglycerate kinase; ; chr02_pseudomole...   100   4e-22

>IMGA|Medtr2g077510.1 Phosphoglycerate kinase; ;
           chr02_pseudomolecule_IMGAG_V3 17878258-17873114 E
           EGN_Mt090430 20090702
          Length = 479

 Score =  158 bits (399), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 81/107 (75%), Positives = 92/107 (85%), Gaps = 1/107 (0%)

Query: 40  SAGLRAASIGRLGFAPADPLFSHHVASKIRSFGFGKASRAVVSMAKKSVGDLTGADLKGK 99
           S+ L A  + RLGFA ADPL +  VASK+R+   G+  R VVSMAKKSVGDL+GA+LKGK
Sbjct: 33  SSFLGARPLRRLGFAAADPLLAVQVASKVRTVS-GRGVRGVVSMAKKSVGDLSGAELKGK 91

Query: 100 RVFVRADLNVPLDDNQNITDDTRIRAAIPTIKHLIQNGAKVILSTHL 146
           +VFVRADLNVPLDDNQNITDDTRIRAAIPTIK+LIQNGAKVILS+HL
Sbjct: 92  KVFVRADLNVPLDDNQNITDDTRIRAAIPTIKYLIQNGAKVILSSHL 138


>IMGA|Medtr2g077490.1 Phosphoglycerate kinase; ;
           chr02_pseudomolecule_IMGAG_V3 17870259-17859756 E
           EGN_Mt090430 20090702
          Length = 401

 Score =  101 bits (252), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 49/62 (79%), Positives = 54/62 (87%)

Query: 85  KKSVGDLTGADLKGKRVFVRADLNVPLDDNQNITDDTRIRAAIPTIKHLIQNGAKVILST 144
           K+SVG L  A+LKGKRVFVR DLNVPLDDN NITDDTRIRAA+PTIK+L   GAKVILS+
Sbjct: 4   KRSVGTLKEAELKGKRVFVRVDLNVPLDDNLNITDDTRIRAAVPTIKYLTGYGAKVILSS 63

Query: 145 HL 146
           HL
Sbjct: 64  HL 65


>IMGA|Medtr2g077490.2 Phosphoglycerate kinase; ;
           chr02_pseudomolecule_IMGAG_V3 17870259-17866346 E
           EGN_Mt090430 20090702
          Length = 401

 Score =  101 bits (252), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 49/62 (79%), Positives = 54/62 (87%)

Query: 85  KKSVGDLTGADLKGKRVFVRADLNVPLDDNQNITDDTRIRAAIPTIKHLIQNGAKVILST 144
           K+SVG L  A+LKGKRVFVR DLNVPLDDN NITDDTRIRAA+PTIK+L   GAKVILS+
Sbjct: 4   KRSVGTLKEAELKGKRVFVRVDLNVPLDDNLNITDDTRIRAAVPTIKYLTGYGAKVILSS 63

Query: 145 HL 146
           HL
Sbjct: 64  HL 65


>IMGA|Medtr2g077480.1 Phosphoglycerate kinase; ;
           chr02_pseudomolecule_IMGAG_V3 17863663-17859756 E
           EGN_Mt090430 20090702
          Length = 401

 Score =  100 bits (248), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 48/62 (77%), Positives = 53/62 (85%)

Query: 85  KKSVGDLTGADLKGKRVFVRADLNVPLDDNQNITDDTRIRAAIPTIKHLIQNGAKVILST 144
           K+SVG L   +LKGKRVFVR DLNVPLDDN NITDDTRIRAA+PTIK+L   GAKVILS+
Sbjct: 4   KRSVGTLKEGELKGKRVFVRVDLNVPLDDNLNITDDTRIRAAVPTIKYLTGYGAKVILSS 63

Query: 145 HL 146
           HL
Sbjct: 64  HL 65