Jatropha Genome Database

JcCB0304921.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0304921.10 + phase: 2 /partial
         (92 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g015410.1 Galactosyl transferase chr05_pseudomolecule...   129   3e-31
IMGA|Medtr8g101770.1 Galactosyl transferase chr08_pseudomolecule...   114   1e-26
IMGA|Medtr8g101760.1 Galactosyl transferase chr08_pseudomolecule...   107   2e-24
IMGA|Medtr7g130450.1 Galactosyl transferase chr07_pseudomolecule...    58   1e-09
IMGA|Medtr8g068240.1 Galactosyl transferase chr08_pseudomolecule...    58   1e-09
IMGA|Medtr8g138760.1 Galactosyl transferase chr08_pseudomolecule...    57   2e-09

>IMGA|Medtr5g015410.1 Galactosyl transferase
           chr05_pseudomolecule_IMGAG_V3 5125143-5123569 E
           EGN_Mt090430 20090702
          Length = 446

 Score =  129 bits (324), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 58/84 (69%), Positives = 69/84 (82%), Gaps = 1/84 (1%)

Query: 5   TREPHLREAGNGKGSWRRPFITHFTGCQPCSGDHNKMYEGDSCWKGMVKALNFADNQVLR 64
            RE +L++AG GKGSWRRPF+THFTGCQPCSG +N+MY  D+CW GM KALNFADNQV+R
Sbjct: 363 IREEYLKDAGYGKGSWRRPFVTHFTGCQPCSGKYNEMYTADACWNGMKKALNFADNQVMR 422

Query: 65  KYGFVHPDLLDSKTVVETPFDYPE 88
           K+GFVH DL D+  V   PFDYP+
Sbjct: 423 KFGFVHKDLGDN-GVSSLPFDYPQ 445


>IMGA|Medtr8g101770.1 Galactosyl transferase
           chr08_pseudomolecule_IMGAG_V3 22159550-22160866 H
           EGN_Mt090430 20090702
          Length = 438

 Score =  114 bits (284), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 53/86 (61%), Positives = 64/86 (74%), Gaps = 5/86 (5%)

Query: 6   REPHLREAGNGKGSWRRPFITHFTGCQPCSGDHNKMYEGDSCWKGMVKALNFADNQVLRK 65
           RE +++  G+     RRPFITHFTGCQPC+G HN MY  D CW GM +ALNFADNQVLRK
Sbjct: 358 REEYVKNLGDM----RRPFITHFTGCQPCNGHHNPMYAADDCWNGMERALNFADNQVLRK 413

Query: 66  YGFVHPDLLDSKTVVETPFDYPEEGP 91
           +GF+HP+LLD K+V   PF YP + P
Sbjct: 414 FGFIHPNLLD-KSVSPLPFGYPAKSP 438


>IMGA|Medtr8g101760.1 Galactosyl transferase
           chr08_pseudomolecule_IMGAG_V3 22153906-22156297 E
           EGN_Mt090430 20090702
          Length = 422

 Score =  107 bits (266), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 53/84 (63%), Positives = 61/84 (72%), Gaps = 7/84 (8%)

Query: 6   REPHLREAGNGKGSWRRPFITHFTGCQPCSGDHNKMYEGDSCWKGMVKALNFADNQVLRK 65
           REP+L      K S RRPF+ HFTGCQPCSGDHN  Y+GD CWK M +ALNFADNQVLR 
Sbjct: 346 REPYL------KWSERRPFVKHFTGCQPCSGDHNPSYKGDVCWKEMERALNFADNQVLRN 399

Query: 66  YGFVHPDLLDSKTVVETPFDYPEE 89
           YGFV  +L+ S +V E PF YP +
Sbjct: 400 YGFVRKNLMTS-SVYEVPFGYPRD 422


>IMGA|Medtr7g130450.1 Galactosyl transferase
           chr07_pseudomolecule_IMGAG_V3 30483602-30481970 E
           EGN_Mt090430 20090702
          Length = 466

 Score = 58.2 bits (139), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 37/65 (56%), Gaps = 6/65 (9%)

Query: 16  GKGSWRRPFITHFTGCQPCS--GDHNKMYEGDSCWKGMVKALNFADNQVLRKYGFVHPDL 73
           G G  R P +THF GC+PC   GD    Y  + C K M +A NF DNQ+L+ YGF H  L
Sbjct: 373 GFGDHRWPLVTHFVGCKPCGKFGD----YPVERCLKQMDRAFNFGDNQILQIYGFTHKSL 428

Query: 74  LDSKT 78
           +  + 
Sbjct: 429 VSRRV 433


>IMGA|Medtr8g068240.1 Galactosyl transferase
           chr08_pseudomolecule_IMGAG_V3 13040127-13041759 E
           EGN_Mt090430 20090702
          Length = 466

 Score = 58.2 bits (139), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 37/65 (56%), Gaps = 6/65 (9%)

Query: 16  GKGSWRRPFITHFTGCQPCS--GDHNKMYEGDSCWKGMVKALNFADNQVLRKYGFVHPDL 73
           G G  R P +THF GC+PC   GD    Y  + C K M +A NF DNQ+L+ YGF H  L
Sbjct: 373 GFGDHRWPLVTHFVGCKPCGKFGD----YPVERCLKQMDRAFNFGDNQILQIYGFTHKSL 428

Query: 74  LDSKT 78
           +  + 
Sbjct: 429 VSRRV 433


>IMGA|Medtr8g138760.1 Galactosyl transferase
           chr08_pseudomolecule_IMGAG_V3 33639417-33635832 E
           EGN_Mt090430 20090702
          Length = 454

 Score = 57.0 bits (136), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 36/65 (55%), Gaps = 6/65 (9%)

Query: 16  GKGSWRRPFITHFTGCQPCS--GDHNKMYEGDSCWKGMVKALNFADNQVLRKYGFVHPDL 73
           G G  R P +THF GC+PC   GD    Y  + C K M +A NF DNQ+L+ YGF H  L
Sbjct: 361 GFGDHRWPLVTHFVGCKPCGKFGD----YPVERCLKQMDRAYNFGDNQILQMYGFTHKSL 416

Query: 74  LDSKT 78
              + 
Sbjct: 417 ASRRV 421