Jatropha Genome Database

JcCB0302671.10

BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0302671.10 - phase: 0 /pseudo/partial
         (197 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g132760.1 Aminoacyl-tRNA synthetase, class I; Bifunct...   153   6e-38
IMGA|Medtr4g132760.2 Aminoacyl-tRNA synthetase, class I; Bifunct...   153   6e-38
IMGA|Medtr4g132760.3 Aminoacyl-tRNA synthetase, class I; Bifunct...   151   3e-37
IMGA|Medtr3g104620.1 Aspartate kinase region; Aminoacyl-tRNA syn...   139   8e-34

>IMGA|Medtr4g132760.1 Aminoacyl-tRNA synthetase, class I;
           Bifunctional aspartokinase/homoserine dehydrogenase I
           chr04_pseudomolecule_IMGAG_V3 31631381-31644243 E
           EGN_Mt090430 20090702
          Length = 917

 Score =  153 bits (386), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 78/139 (56%), Positives = 99/139 (71%)

Query: 59  RRESACIYVSSSVKAVLLDESKEKAYLSKGGMWSVHKFGGTCVGSSERIKNVAEIIVNDG 118
           RRES    + +S+  V ++ + E+  LSKG  WSVHKFGGTC+GSS+RIKNV +I++ND 
Sbjct: 55  RRESPSSGICASLTDVSVNVAVEEKELSKGDSWSVHKFGGTCMGSSQRIKNVGDIVLNDD 114

Query: 119 SEGKLVVVSALSKVTDMLYDLIYKAQSRDDSYIAAADAVFEKHKXXXXXXXXXXXXXXXX 178
           SE KLVVVSA+SKVTDM+YDLI KAQSRD+SYI++ DAV EKH                 
Sbjct: 115 SERKLVVVSAMSKVTDMMYDLINKAQSRDESYISSLDAVLEKHSATAHDILDGETLAIFL 174

Query: 179 XQLQHDVNNLKAMLRAIFI 197
            +L  D++NLKAMLRAI+I
Sbjct: 175 SKLHEDISNLKAMLRAIYI 193


>IMGA|Medtr4g132760.2 Aminoacyl-tRNA synthetase, class I;
           Bifunctional aspartokinase/homoserine dehydrogenase I
           chr04_pseudomolecule_IMGAG_V3 31631381-31644243 E
           EGN_Mt090430 20090702
          Length = 916

 Score =  153 bits (386), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 78/139 (56%), Positives = 99/139 (71%)

Query: 59  RRESACIYVSSSVKAVLLDESKEKAYLSKGGMWSVHKFGGTCVGSSERIKNVAEIIVNDG 118
           RRES    + +S+  V ++ + E+  LSKG  WSVHKFGGTC+GSS+RIKNV +I++ND 
Sbjct: 55  RRESPSSGICASLTDVSVNVAVEEKELSKGDSWSVHKFGGTCMGSSQRIKNVGDIVLNDD 114

Query: 119 SEGKLVVVSALSKVTDMLYDLIYKAQSRDDSYIAAADAVFEKHKXXXXXXXXXXXXXXXX 178
           SE KLVVVSA+SKVTDM+YDLI KAQSRD+SYI++ DAV EKH                 
Sbjct: 115 SERKLVVVSAMSKVTDMMYDLINKAQSRDESYISSLDAVLEKHSATAHDILDGETLAIFL 174

Query: 179 XQLQHDVNNLKAMLRAIFI 197
            +L  D++NLKAMLRAI+I
Sbjct: 175 SKLHEDISNLKAMLRAIYI 193


>IMGA|Medtr4g132760.3 Aminoacyl-tRNA synthetase, class I;
           Bifunctional aspartokinase/homoserine dehydrogenase I
           chr04_pseudomolecule_IMGAG_V3 31631381-31644243 E
           EGN_Mt090430 20090702
          Length = 909

 Score =  151 bits (381), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 82/139 (58%), Positives = 97/139 (69%), Gaps = 7/139 (5%)

Query: 59  RRESACIYVSSSVKAVLLDESKEKAYLSKGGMWSVHKFGGTCVGSSERIKNVAEIIVNDG 118
           RRES     SS + A L  E KE   LSKG  WSVHKFGGTC+GSS+RIKNV +I++ND 
Sbjct: 55  RRESP----SSGICASLTVEEKE---LSKGDSWSVHKFGGTCMGSSQRIKNVGDIVLNDD 107

Query: 119 SEGKLVVVSALSKVTDMLYDLIYKAQSRDDSYIAAADAVFEKHKXXXXXXXXXXXXXXXX 178
           SE KLVVVSA+SKVTDM+YDLI KAQSRD+SYI++ DAV EKH                 
Sbjct: 108 SERKLVVVSAMSKVTDMMYDLINKAQSRDESYISSLDAVLEKHSATAHDILDGETLAIFL 167

Query: 179 XQLQHDVNNLKAMLRAIFI 197
            +L  D++NLKAMLRAI+I
Sbjct: 168 SKLHEDISNLKAMLRAIYI 186


>IMGA|Medtr3g104620.1 Aspartate kinase region; Aminoacyl-tRNA
           synthetase, class I chr03_pseudomolecule_IMGAG_V3
           26062388-26055010 E EGN_Mt090430 20090702
          Length = 906

 Score =  139 bits (350), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 74/138 (53%), Positives = 92/138 (66%)

Query: 60  RESACIYVSSSVKAVLLDESKEKAYLSKGGMWSVHKFGGTCVGSSERIKNVAEIIVNDGS 119
           ++S    + SS+    +D + E+  L KG  WSVHKFGGTCVGSS RI NVA++I+ND S
Sbjct: 46  KDSPRTKIHSSLTDFSVDVAVEEKKLPKGETWSVHKFGGTCVGSSARINNVADVIINDDS 105

Query: 120 EGKLVVVSALSKVTDMLYDLIYKAQSRDDSYIAAADAVFEKHKXXXXXXXXXXXXXXXXX 179
           E KLVVVSA+SKVTDM+YDLI+KA+++D SYI+A DAV EKH                  
Sbjct: 106 ERKLVVVSAMSKVTDMMYDLIHKAEAQDKSYISALDAVEEKHSLTASELFDGDDLATFLS 165

Query: 180 QLQHDVNNLKAMLRAIFI 197
            L  DV NLKAML+AI I
Sbjct: 166 NLHQDVGNLKAMLQAIDI 183