Jatropha Genome Database

JcCB0297891.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0297891.10 + phase: 0 
         (208 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g139470.1 Protein of unknown function UPF0012 chr03_p...    59   2e-09
IMGA|Medtr2g107680.1 Nitrilase/cyanide hydratase and apolipoprot...    51   4e-07

>IMGA|Medtr3g139470.1 Protein of unknown function UPF0012
           chr03_pseudomolecule_IMGAG_V3 35915309-35909509 E
           EGN_Mt090430 20090702
          Length = 357

 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 80/182 (43%), Gaps = 32/182 (17%)

Query: 39  TVFYDTAATLDKAERLLAEAAGHGSQLVVFPEAFVGGYPRGSNFGVSIGFRTSKGREEFR 98
           +V  D    +  A   + +AA  G++L++ PE +   Y   S F V              
Sbjct: 84  SVTSDKDKNIAHARTAIQDAAAKGAKLILLPEIWNSPYSNDS-FPV-------------- 128

Query: 99  KYHASAIDVPG---PEVDRLAAMAGKYKLYLVMGVI-ERDGYTLYCTILFFDSQGQYLGK 154
             +A  ID  G   P    L+ ++   K+ +V G I ER G  LY T   F + G+   K
Sbjct: 129 --YAEDIDAGGDASPSTAMLSELSSLLKITIVGGSIPERSGDRLYNTCCVFGTDGKLKAK 186

Query: 155 HRKL------MP---TAMERIVWGFGDGSTIPVIDTPIGKIGGAICWENRMPLLRTAMYG 205
           HRK+      +P   T +E +    GD  TI  +DT +G+IG  IC++ R P L      
Sbjct: 187 HRKIHLFDIDIPGKITFIESLTLTAGDTPTI--VDTEVGRIGIGICYDIRFPELAMIYAA 244

Query: 206 KG 207
           +G
Sbjct: 245 RG 246


>IMGA|Medtr2g107680.1 Nitrilase/cyanide hydratase and apolipoprotein
           N-acyltransferase chr02_pseudomolecule_IMGAG_V3
           25380990-25384007 F EGN_Mt090430 20090702
          Length = 301

 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 76/191 (39%), Gaps = 21/191 (10%)

Query: 21  MGGDSSAPIVRATVVQASTVFYDTAATLDKAERLLAEAAGHGSQLVVFPEAFVGGYPRGS 80
           M  D    +V + +  A T   D +  +  AERL+  A   G+ +V+  E F G Y    
Sbjct: 1   MAEDKGRKVVVSALQFACTD--DVSTNVTTAERLVRAAHKQGANIVLIQELFEGYY---- 54

Query: 81  NFGVSIGFRTSKGREEFRKYHASAIDVPGPEVDRLAAMAGKYKLYLVMGVIERDGYTLYC 140
                        RE+F +      D   P + RL  +A +  + + +   E      Y 
Sbjct: 55  --------FCQAQREDFIQRAKPYKD--HPTIMRLQKLAKELGVVIPVSFFEEANNAHYN 104

Query: 141 TILFFDSQGQYLGKHRKLM----PTAMERIVWGFGDGSTIPVIDTPIGKIGGAICWENRM 196
           +I   D+ G  LG +RK      P   E+  +  GD +   V  T   KIG AICW+   
Sbjct: 105 SIAIIDADGTDLGIYRKSHIPDGPGYEEKFYFNPGD-TGFKVFQTKYAKIGVAICWDQWF 163

Query: 197 PLLRTAMYGKG 207
           P    AM  +G
Sbjct: 164 PEAARAMALQG 174