Jatropha Genome Database

JcCB0296601.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0296601.10 + phase: 2 /pseudo/partial
         (171 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g039520.1 NB-ARC chr08_pseudomolecule_IMGAG_V3 830558...    55   2e-08
IMGA|AC233665_7.1 NB-ARC AC233665.1 18053-13974 H EGN_Mt090430 2...    51   3e-07
IMGA|Medtr8g039540.1 NB-ARC chr08_pseudomolecule_IMGAG_V3 832068...    50   4e-07
IMGA|Medtr3g039270.1 NB-ARC chr03_pseudomolecule_IMGAG_V3 103118...    50   5e-07
IMGA|Medtr3g020460.1 NB-ARC chr03_pseudomolecule_IMGAG_V3 466737...    50   7e-07
IMGA|Medtr3g005880.1 NB-ARC chr03_pseudomolecule_IMGAG_V3 534503...    49   1e-06
IMGA|Medtr3g039420.1 NB-ARC chr03_pseudomolecule_IMGAG_V3 104187...    49   1e-06
IMGA|Medtr3g030400.1 NB-ARC chr03_pseudomolecule_IMGAG_V3 822290...    48   2e-06
IMGA|Medtr3g039250.1 NB-ARC chr03_pseudomolecule_IMGAG_V3 103003...    47   4e-06
IMGA|Medtr2g085680.1 NBS-LRR resistance-like protein J78, relate...    47   5e-06
IMGA|Medtr3g043570.1 Peptidase aspartic, active site; NB-ARC chr...    47   5e-06
IMGA|Medtr3g103020.1 NB-ARC chr03_pseudomolecule_IMGAG_V3 252707...    47   6e-06
IMGA|Medtr3g020510.1 NB-ARC chr03_pseudomolecule_IMGAG_V3 468512...    46   7e-06
IMGA|Medtr3g005900.1 Transcription factor, MADS-box; NB-ARC chr0...    46   8e-06
IMGA|Medtr3g039770.1 NB-ARC chr03_pseudomolecule_IMGAG_V3 106002...    46   9e-06

>IMGA|Medtr8g039520.1 NB-ARC chr08_pseudomolecule_IMGAG_V3
           8305584-8301826 H EGN_Mt090430 20090702
          Length = 1252

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 69/135 (51%), Gaps = 12/135 (8%)

Query: 36  VNLTLLEIYAVLDHAEEKQTTNPAVKIWLSKLQDLAYXXXXXXXXXXXXXSLSKLKARSQ 95
           +N+TLL I AV+D AE KQ  NP V+ WL  ++D                S SKL+A SQ
Sbjct: 44  LNITLLSIDAVVDDAELKQIRNPNVRAWLDAVKDAVLDAEDLLEEIDFEVSKSKLEAESQ 103

Query: 96  DIMGAECNPTPSCTCLNPNVVLLNLKTRSKLKEITTRLKTIAKEKNDLDLR-----TNIG 150
                  N        N +    + +  +K++E+   L+ ++ +K+ LDL+      ++G
Sbjct: 104 STTNKVWN------FFNASSSSFDKEIETKMQEVLDNLEYLSSKKDILDLKKSTSSFDVG 157

Query: 151 RRSNRMNERVPTTSL 165
             S ++++++P+TSL
Sbjct: 158 SGS-QVSQKLPSTSL 171


>IMGA|AC233665_7.1 NB-ARC AC233665.1 18053-13974 H EGN_Mt090430
           20090702
          Length = 301

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 18/130 (13%)

Query: 38  LTLLEIYAVLDHAEEKQTTNPAVKIWLSKLQDLAYXXXXXXXXXXXXXSLSKLKARSQDI 97
           + LL ++AVL+ AEEKQ  N AVK WL +L+D+A+                K+K+R    
Sbjct: 45  IMLLSVHAVLNDAEEKQMKNEAVKEWLEELKDVAFDADDLLDEIFTG---EKIKSR---- 97

Query: 98  MGAECNPTPSCTCLNPNVVLLNLKTRSKLKEITTRLKTIAKEKNDLDLRTNIGRRSNRMN 157
              E N   S     P+    + +   K++++  RL+ + K K  LDL+     +  ++ 
Sbjct: 98  ---EVNSFHS-----PHTNFYDKQLEQKIEDVYERLEFVIKLKEVLDLKVG---KEVKVT 146

Query: 158 ERVPTTSLMK 167
            + PT+S+++
Sbjct: 147 HKTPTSSVVE 156


>IMGA|Medtr8g039540.1 NB-ARC chr08_pseudomolecule_IMGAG_V3
           8320683-8316946 H EGN_Mt090430 20090702
          Length = 1245

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 68/141 (48%), Gaps = 14/141 (9%)

Query: 36  VNLTLLEIYAVLDHAEEKQTTNPAVKIWLSKLQDLAYXXXXXXXXXXXXXSLSKLKARSQ 95
           +N+  L I  V+D AE+KQ  N  VK WL  ++D+ +                KL+  SQ
Sbjct: 44  LNIMFLSINVVIDDAEQKQIRNQQVKAWLDAVKDVVFEAEDLLDEIDIQAFQCKLEGESQ 103

Query: 96  DIMGAECNPTPSCTCLNPNVVLLNLKTRSKLKEITTRLKTIAKEKNDLDLR-------TN 148
                  +P    + LN +    + +  SK++E+   L+ +A +K+ L L+       + 
Sbjct: 104 S------SPNKVWSFLNVSANSFDKEIESKMQEVLENLEYLASKKDILGLKEASSSTSSA 157

Query: 149 IGRRS-NRMNERVPTTSLMKE 168
            G  S ++++ ++P+TSL+ E
Sbjct: 158 FGVGSCSQVSRKLPSTSLLGE 178


>IMGA|Medtr3g039270.1 NB-ARC chr03_pseudomolecule_IMGAG_V3
           10311876-10314665 E EGN_Mt090430 20090702
          Length = 873

 Score = 50.4 bits (119), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 19/135 (14%)

Query: 39  TLLEIYAVLDHAEEKQTTNPAVKIWLSKLQDLAYXXXXXXXXXXXXXSLSKL-----KAR 93
           TLL +  VLD AEEKQ  NPAVK+WL  L+D  +                K+     + +
Sbjct: 45  TLLTLQVVLDDAEEKQINNPAVKLWLDDLKDAVFDAEDLLSEISYDSLRCKVENAQAQNK 104

Query: 94  SQDIMGAECNPTPSCTCLNPNVVLLNLKTRSKLKEITTRLKTIAKEKNDLDLRTNIGRRS 153
           S  +M    +P  S             +  S++K +   L+  A+ K+ L L+T I R S
Sbjct: 105 SYQVMNFLSSPFNS----------FYREINSQMKIMCESLQLFAQNKDILGLQTKIARVS 154

Query: 154 NRMNERVPTTSLMKE 168
           +    R P++S++ E
Sbjct: 155 H----RTPSSSVVNE 165


>IMGA|Medtr3g020460.1 NB-ARC chr03_pseudomolecule_IMGAG_V3
           4667370-4663770 E EGN_Mt090430 20090702
          Length = 1156

 Score = 49.7 bits (117), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 64/136 (47%), Gaps = 15/136 (11%)

Query: 38  LTLLEIYAVLDHAEEKQTTNPAVKIWLSKLQDLAYXXXXXXXXXXXXXSLSKLKARSQDI 97
           +TL  I  VL+ AE KQ  +  VK WL  L+  AY              L KLKA SQ  
Sbjct: 47  ITLNSINHVLEEAEMKQYQSMYVKKWLDDLKHYAYEVDQLLDEIATDAPLKKLKAESQPS 106

Query: 98  MGAECNPTPSCTCLNPNVVLLNLKTRSKLKEITTRLKTIAKEKNDLDLR-----TNIGRR 152
                +   S T  NP          S++KE+  +L+ +AK+K+ L L+     ++ G  
Sbjct: 107 TSKVFDFFSSFT--NP--------FESRIKELLEKLEFLAKQKDMLGLKHEAFASSEGGV 156

Query: 153 SNRMNERVPTTSLMKE 168
           S +  +R PTT+L+ E
Sbjct: 157 SWKPLDRFPTTALVDE 172


>IMGA|Medtr3g005880.1 NB-ARC chr03_pseudomolecule_IMGAG_V3
           534503-527011 E EGN_Mt090430 20090702
          Length = 1403

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 20/138 (14%)

Query: 36  VNLTLLEIYAVLDHAEEKQTTNPAVKIWLSKLQDLAYXXXXXXXXXXXXXSLSKLKARSQ 95
           +N+TLL + AVL  AEEKQ TNPAVK WL  L+D  +                  +A  +
Sbjct: 43  LNVTLLSLQAVLHDAEEKQITNPAVKKWLDLLRDAVFEADDLFDEINT-------EALQR 95

Query: 96  DIMGAECNPTPSCTC---LNPNVVLLNLKTRSKLKEITTRLKTIAKEKNDLDLRTNIGRR 152
            + G + N T S      L+    + N K  SKL+++  RL+ ++ +        N+G +
Sbjct: 96  KVEGEDENQTASTKVLKKLSYRFKMFNRKINSKLQKLVGRLEHLSNQ--------NLGLK 147

Query: 153 --SNRMNERVPTTSLMKE 168
             S+ +    PT+S++ +
Sbjct: 148 GVSSNVWHGTPTSSVVGD 165


>IMGA|Medtr3g039420.1 NB-ARC chr03_pseudomolecule_IMGAG_V3
           10418759-10423813 E EGN_Mt090430 20090702
          Length = 1335

 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 19/135 (14%)

Query: 39  TLLEIYAVLDHAEEKQTTNPAVKIWLSKLQDLAYXXXXXXXXXXXXXSLSKL-----KAR 93
           TLL +  VLD AEEKQ  NPAVK+WL  L+D  +                K+     + +
Sbjct: 45  TLLTLQVVLDDAEEKQINNPAVKLWLDDLKDAVFDAEDLFSEISYDSLRCKVENAQAQNK 104

Query: 94  SQDIMGAECNPTPSCTCLNPNVVLLNLKTRSKLKEITTRLKTIAKEKNDLDLRTNIGRRS 153
           S  +M    +P  S             +  S++K +   L+  A+ K+ L L+T    ++
Sbjct: 105 SYQVMNFLSSPFNS----------FYREINSQMKIMCESLQLFAQNKDILGLQT----KN 150

Query: 154 NRMNERVPTTSLMKE 168
            R++ R P++S++ E
Sbjct: 151 ARVSHRTPSSSVVNE 165


>IMGA|Medtr3g030400.1 NB-ARC chr03_pseudomolecule_IMGAG_V3
           8222908-8217880 E EGN_Mt090430 20090702
          Length = 1275

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 11/131 (8%)

Query: 39  TLLEIYAVLDHAEEKQTTNPAVKIWLSKLQDLAYXXXXXXXXXXXXXSLSKLKARSQDIM 98
           TLL + AVLD AEEKQ  N AVK WL  L+D  +             S   L+ + +D  
Sbjct: 47  TLLVLQAVLDDAEEKQINNRAVKQWLDDLKDALF----DAEDLLNQISYDSLRCKVEDTQ 102

Query: 99  GAECNPTPSC-TCLNPNVVLLNLKTRSKLKEITTRLKTIAKEKNDLDLRTNIGRRSNRMN 157
            A  N T      L+        +  S++K +   L+  A+ K+ L L+T IG+ S    
Sbjct: 103 AA--NKTNQVWNFLSSPFNTFYREINSQMKIMCDSLQIFAQHKDILGLQTKIGKVS---- 156

Query: 158 ERVPTTSLMKE 168
            R P++S++ E
Sbjct: 157 RRTPSSSVVNE 167


>IMGA|Medtr3g039250.1 NB-ARC chr03_pseudomolecule_IMGAG_V3
           10300346-10305741 E EGN_Mt090430 20090702
          Length = 1293

 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 22/137 (16%)

Query: 39  TLLEIYAVLDHAEEKQTTNPAVKIWLSKLQDLAYXXXXXXXXXXXXXSLSKLKARSQDIM 98
           T+L + AVLD AEEKQ +NP V+ WL  L+D  +                 L   S D +
Sbjct: 47  TMLNLQAVLDDAEEKQISNPHVRQWLDNLKDAVFDAEDL------------LNEISYDSL 94

Query: 99  GAECNPTPSCTCLNPNVVLLNLKTRSKLKEITT-------RLKTIAKEKNDLDLRTNIGR 151
             +     +    N  +  L+    S  KEI +       RL+  A+ K+ L L+T I R
Sbjct: 95  RCKVENAQAQNKTNQVLNFLSSPFNSFYKEINSQTKIMCERLQLFAQNKDVLGLQTKIAR 154

Query: 152 RSNRMNERVPTTSLMKE 168
             +R   R P++S++ E
Sbjct: 155 VISR---RTPSSSVVNE 168


>IMGA|Medtr2g085680.1 NBS-LRR resistance-like protein J78, related
           chr02_pseudomolecule_IMGAG_V3 19371168-19376091 E
           EGN_Mt090430 20090702
          Length = 326

 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 64/137 (46%), Gaps = 23/137 (16%)

Query: 39  TLLEIYAVLDHAEEKQTTNPAVKIWLSKLQDLAYXXXXXXXXXXXXXSLSKLKARSQDIM 98
           TLL +  VLD AEEKQ  NPAVK WL  L+D  +                 L   S D +
Sbjct: 47  TLLTLQVVLDDAEEKQINNPAVKQWLDDLKDAIFDVEDL------------LNEISYDSL 94

Query: 99  GAECNPTPSCTCLNPNVVLLNLKTRSKLKEITTRLKTI-------AKEKNDLDLRTNIGR 151
             +   T +    N  +  L+    S  +EI +++K +       A+ K+ L L+T    
Sbjct: 95  RCKVENTQAQNKTNQVLNFLSSPFNSFYREINSQMKIMCESLQLFAQHKDILGLQT---- 150

Query: 152 RSNRMNERVPTTSLMKE 168
           +S R++ R P++S++ E
Sbjct: 151 KSARVSRRTPSSSVVNE 167


>IMGA|Medtr3g043570.1 Peptidase aspartic, active site; NB-ARC
           chr03_pseudomolecule_IMGAG_V3 11934391-11939687 E
           EGN_Mt090430 20090702
          Length = 1329

 Score = 46.6 bits (109), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 9/124 (7%)

Query: 45  AVLDHAEEKQTTNPAVKIWLSKLQDLAYXXXXXXXXXXXXXSLSKLKARSQDIMGAECNP 104
           AVLD AE+KQ TN AVK W+ +L+D  Y                K++    + M  +   
Sbjct: 53  AVLDDAEQKQITNTAVKQWMDQLKDAIYDAEDLLNQINYDSLRCKVEKIQSENMTNQVWN 112

Query: 105 TPSCTCLNPNVVLLNLKTRSKLKEITTRLKTIAKEKNDLDLRTNIGRRSNRMNERVPTTS 164
             SC   N     L  +  S++K +  RL+  A++++ L L+T     S R++ R P++S
Sbjct: 113 LFSCPFKN-----LYGEINSQMKIMCQRLQLFAQQRDILGLQT----VSGRVSLRTPSSS 163

Query: 165 LMKE 168
           ++ E
Sbjct: 164 MVNE 167


>IMGA|Medtr3g103020.1 NB-ARC chr03_pseudomolecule_IMGAG_V3
           25270771-25268049 E EGN_Mt090430 20090702
          Length = 891

 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 58/136 (42%), Gaps = 28/136 (20%)

Query: 40  LLEIYAVLDHAEEKQTTNPAVKIWLSKLQDLAYXXXXXXXXXXXXXSLSKLKARSQDIMG 99
           L  I AVL  AEEKQ T+  VK WL KL+D+AY                       DI+ 
Sbjct: 38  LTAIRAVLKDAEEKQITSHVVKDWLQKLRDVAYVL--------------------DDILD 77

Query: 100 AECNPTPSC-------TCLNPNVVLLNLKTRSKLKEITTRLKTIAKEKNDLDLRTNIGRR 152
            EC+ T          T  +P  +L       ++KE+  ++  IA+E+    L+  +  R
Sbjct: 78  -ECSITLKAHGDNKWITRFHPLKILARRNIGKRMKEVAKKIDDIAEERMKFGLQVGVMER 136

Query: 153 SNRMNERVPTTSLMKE 168
                E   TTS++ E
Sbjct: 137 QPEDEEWRKTTSVITE 152


>IMGA|Medtr3g020510.1 NB-ARC chr03_pseudomolecule_IMGAG_V3
           4685121-4681678 E EGN_Mt090430 20090702
          Length = 1147

 Score = 46.2 bits (108), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 15/136 (11%)

Query: 38  LTLLEIYAVLDHAEEKQTTNPAVKIWLSKLQDLAYXXXXXXXXXXXXXSLSKLKARSQDI 97
           +TL  I  VL+ AE KQ  +  VK WL  L+  AY              L K K  SQ  
Sbjct: 45  ITLNSINHVLEEAEMKQFQSMYVKKWLDDLKHYAYEVDQLLDEIATDTPLKKQKLESQ-- 102

Query: 98  MGAECNPTPSCTCLNPNVVLLNLKTRSKLKEITTRLKTIAKEKNDLDLRTNI-----GRR 152
                   PS + +   +        S++KE+  +L+ +AK+K+ L L+ +      G  
Sbjct: 103 --------PSTSKVFDFISSFTNPFESRIKELLEKLEFLAKQKHMLGLKQDACASSEGGV 154

Query: 153 SNRMNERVPTTSLMKE 168
           S +  +R+PTTSL+ E
Sbjct: 155 SWKPLDRLPTTSLVDE 170


>IMGA|Medtr3g005900.1 Transcription factor, MADS-box; NB-ARC
          chr03_pseudomolecule_IMGAG_V3 554111-549787 H
          EGN_Mt090430 20090702
          Length = 1245

 Score = 46.2 bits (108), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 28/37 (75%)

Query: 36 VNLTLLEIYAVLDHAEEKQTTNPAVKIWLSKLQDLAY 72
          +N+TL+ + AVL+ AEEKQ TNPAVK WL  L+D  +
Sbjct: 43 LNITLMSLQAVLNDAEEKQITNPAVKQWLDLLRDAVF 79


>IMGA|Medtr3g039770.1 NB-ARC chr03_pseudomolecule_IMGAG_V3
           10600254-10596107 E EGN_Mt090430 20090702
          Length = 1227

 Score = 46.2 bits (108), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 11/131 (8%)

Query: 39  TLLEIYAVLDHAEEKQTTNPAVKIWLSKLQDLAYXXXXXXXXXXXXXSLSKLK-ARSQDI 97
           TLL +  VLD AEEKQ  NP+VK WL  L+D  +                K++ A++Q+ 
Sbjct: 47  TLLTLQVVLDDAEEKQIINPSVKQWLDDLKDAIFDAEDLLNEISYDSLRCKVENAKAQNK 106

Query: 98  MGAECNPTPSCTCLNPNVVLLNLKTRSKLKEITTRLKTIAKEKNDLDLRTNIGRRSNRMN 157
                N       L+        +  S++K +   L+  A+ K+ L L+T    +S R++
Sbjct: 107 TNQVLN------FLSSPFNTFYREINSQMKVMCDSLQFFAQYKDILGLQT----KSGRVS 156

Query: 158 ERVPTTSLMKE 168
            R P++S++ E
Sbjct: 157 RRTPSSSVVNE 167