Jatropha Genome Database
- JcCB0293861.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0293861.20 - phase: 0 /partial
(102 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr8g037220.1 Adenine nucleotide translocator 1 chr08_pse... 181 1e-46
IMGA|Medtr2g117590.1 Mitochondrial substrate carrier chr02_pseud... 169 3e-43
IMGA|Medtr4g154910.1 Mitochondrial substrate carrier chr04_pseud... 103 3e-23
IMGA|Medtr3g139860.1 Mitochondrial substrate carrier chr03_pseud... 79 8e-16
IMGA|Medtr4g009080.1 Mitochondrial substrate carrier chr04_pseud... 48 2e-06
IMGA|Medtr1g112070.1 Mitochondrial substrate carrier chr01_pseud... 47 2e-06
IMGA|Medtr3g139730.1 Mitochondrial substrate carrier chr03_pseud... 47 2e-06
IMGA|Medtr2g123030.1 Mitochondrial substrate carrier chr02_pseud... 46 4e-06
>IMGA|Medtr8g037220.1 Adenine nucleotide translocator 1
chr08_pseudomolecule_IMGAG_V3 8013525-8008899 E
EGN_Mt090430 20090702
Length = 401
Score = 181 bits (458), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 88/99 (88%), Positives = 92/99 (92%)
Query: 3 FQDSFWASFALGWAVTNGAGLASYPIDTVRRRMMMTSGEAVKYKSSFDAFSQIIKNEGAK 62
QDSF+ASF LGW +TNGAGLASYPIDTVRRRMMMTSGEAVKYKSSFDAF QI+KNEGAK
Sbjct: 302 LQDSFFASFGLGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSFDAFQQILKNEGAK 361
Query: 63 SLFKGGGANILRAIAGAGVLAGYDKLQVIAFGKKYGSGG 101
SLFKG GANILRA+AGAGVLAGYDKLQVI GKKYGSGG
Sbjct: 362 SLFKGAGANILRAVAGAGVLAGYDKLQVIMLGKKYGSGG 400
>IMGA|Medtr2g117590.1 Mitochondrial substrate carrier
chr02_pseudomolecule_IMGAG_V3 27673245-27668971 E
EGN_Mt090430 20090702
Length = 362
Score = 169 bits (428), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 83/99 (83%), Positives = 89/99 (89%)
Query: 3 FQDSFWASFALGWAVTNGAGLASYPIDTVRRRMMMTSGEAVKYKSSFDAFSQIIKNEGAK 62
FQDSF ASFALGWAVT GA +ASYP+DTVRRRMMMTSGEAVKYKSS DAFSQI+K EG K
Sbjct: 263 FQDSFLASFALGWAVTVGASVASYPLDTVRRRMMMTSGEAVKYKSSLDAFSQIVKTEGPK 322
Query: 63 SLFKGGGANILRAIAGAGVLAGYDKLQVIAFGKKYGSGG 101
SLFKG GANILRA+AGAGVLA YDKLQV+ GKK+GSGG
Sbjct: 323 SLFKGAGANILRAVAGAGVLASYDKLQVLMLGKKFGSGG 361
>IMGA|Medtr4g154910.1 Mitochondrial substrate carrier
chr04_pseudomolecule_IMGAG_V3 38133982-38135635 F
EGN_Mt090430 20090702
Length = 317
Score = 103 bits (256), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 67/90 (74%)
Query: 3 FQDSFWASFALGWAVTNGAGLASYPIDTVRRRMMMTSGEAVKYKSSFDAFSQIIKNEGAK 62
F+ +F+ASF LGW++T +G+ +YP DT+RRRMM+TSG KY +S AF +I+ EG
Sbjct: 215 FEGNFFASFFLGWSITTVSGVCAYPFDTLRRRMMLTSGHQNKYYNSMHAFREIVGQEGFL 274
Query: 63 SLFKGGGANILRAIAGAGVLAGYDKLQVIA 92
+LF+G AN+L +AGAGVLAGYD+L I+
Sbjct: 275 ALFRGVTANMLLGMAGAGVLAGYDQLNRIS 304
>IMGA|Medtr3g139860.1 Mitochondrial substrate carrier
chr03_pseudomolecule_IMGAG_V3 36096971-36092485 E
EGN_Mt090430 20090702
Length = 326
Score = 78.6 bits (192), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 6 SFWASFALGWAVTNGAGLASYPIDTVRRRMMMTSG-EAVKYKSSFDAFSQIIKNEGAKSL 64
+ W + + AVT AGL SYP+DTVRRRMMM SG E Y S+ D + +I + EG S
Sbjct: 234 ALWKRWMVAQAVTTSAGLVSYPLDTVRRRMMMQSGMEHPVYNSTLDCWRKIYRTEGLISF 293
Query: 65 FKGGGANILRAIAGAGVLAGYDKLQ 89
++G +N+ R+ A +L YD+++
Sbjct: 294 YRGAVSNVFRSTGAAAILVLYDEVK 318
>IMGA|Medtr4g009080.1 Mitochondrial substrate carrier
chr04_pseudomolecule_IMGAG_V3 1371698-1374294 E
EGN_Mt090430 20090702
Length = 304
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 23 LASYPIDTVRRRMMMTSGEAVKYKSSFDAFSQIIKNEGAKSLFKGGGANILRA-IAGAGV 81
+ SYP D V+ R+ + A+KYK +D ++ ++ EG L++G G + RA + V
Sbjct: 222 VCSYPFDVVKTRLQAQTPSAIKYKGVYDCITKSVREEGYPVLWRGLGTAVARAFVVNGAV 281
Query: 82 LAGYD 86
A Y+
Sbjct: 282 FAAYE 286
>IMGA|Medtr1g112070.1 Mitochondrial substrate carrier
chr01_pseudomolecule_IMGAG_V3 24026270-24024429 E
EGN_Mt090430 20090702
Length = 302
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 21 AGLASYPIDTVRRRM-----MMTSGEAVKYKSSFDAFSQIIKNEGAKSLFKGGGANILRA 75
A + + P D V+ RM MM G +Y DAF++IIK EG + L+KG NI RA
Sbjct: 121 AQVIASPADLVKVRMQADSQMMRKGLQPRYSGPIDAFNKIIKAEGFQGLWKGVFPNIQRA 180
Query: 76 -IAGAGVLAGYDKLQVIAFGKKYGSGGV 102
+ G LA YD + K V
Sbjct: 181 FLVNMGELACYDHAKQFVIKSKIAEDNV 208
>IMGA|Medtr3g139730.1 Mitochondrial substrate carrier
chr03_pseudomolecule_IMGAG_V3 36041873-36046273 F
EGN_Mt090430 20090702
Length = 343
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 8/72 (11%)
Query: 25 SYPIDTVRRRMMMTS------GEAVKYKSSFDAFSQIIKNEGAKSLFKGGGANILRAIAG 78
+YP+D V+R+M + S G+A YK++FD +I++N+G + LF G N +R +
Sbjct: 256 TYPLDVVKRQMQVGSLQNGANGDAA-YKNTFDGLRKIVRNQGWRQLFAGVSINYIRIVPS 314
Query: 79 AGV-LAGYDKLQ 89
A + YD ++
Sbjct: 315 AAISFTTYDMMK 326
>IMGA|Medtr2g123030.1 Mitochondrial substrate carrier
chr02_pseudomolecule_IMGAG_V3 29696867-29695262 E
EGN_Mt090430 20090702
Length = 288
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 21 AGLAS----YPIDTVRRRMMMTSGEAVKYKSSFDAFSQIIKNEGAKSLFKGGGANILRA- 75
AG+AS YP D ++ R+ + ++KYK D +IIK EG+ L++G GA ++RA
Sbjct: 209 AGIASWLFNYPTDVIKTRLQAQTSSSLKYKGILDCTLKIIKEEGSIVLWRGLGATLVRAF 268
Query: 76 IAGAGVLAGYD 86
+ + + Y
Sbjct: 269 VMNSAIFPAYQ 279