Jatropha Genome Database
- JcCB0290351.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0290351.10 + phase: 0 /pseudo
(476 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr1g007520.1 Exostosin-like chr01_pseudomolecule_IMGAG_V... 154 1e-37
IMGA|Medtr4g159530.1 Exostosin-like chr04_pseudomolecule_IMGAG_V... 128 5e-30
IMGA|AC235664_16.1 Exostosin-like AC235664.1 66545-63524 E EGN_M... 119 3e-27
IMGA|Medtr8g105490.1 Exostosin-like chr08_pseudomolecule_IMGAG_V... 85 1e-16
IMGA|Medtr1g073800.1 Exostosin-like chr01_pseudomolecule_IMGAG_V... 73 2e-13
IMGA|Medtr3g109550.1 Exostosin-like chr03_pseudomolecule_IMGAG_V... 67 2e-11
IMGA|Medtr3g137610.1 Exostosin-like chr03_pseudomolecule_IMGAG_V... 49 5e-06
>IMGA|Medtr1g007520.1 Exostosin-like chr01_pseudomolecule_IMGAG_V3
474822-477355 E EGN_Mt090430 20090702
Length = 568
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/210 (44%), Positives = 123/210 (58%), Gaps = 12/210 (5%)
Query: 265 PENSSPNVTFPRSEESS----IRTPVAHIDSN-TSSLDKDSMSNSDNHGKSGKLQNNIAK 319
PEN+ N++ P ++ I T V D N T+S+ +S S S +G G +Q+ +
Sbjct: 105 PENAPTNLSPPFGSTTNVGPNITTAVLSNDDNITNSIKNESFSPSSQNG--GNVQDKSSS 162
Query: 320 LNENSPVTTNFELKKMPKLPISGVISVSEMNXXXXXXXXXXXXXXXXXXXAVDQELLHAK 379
++ P + ++ +PI V +VSEMN VDQELL A+
Sbjct: 163 ISSTVP-----KERQEIHVPIKEVTTVSEMNKLLLQSHASYRSMKPRWFSNVDQELLQAR 217
Query: 380 SLIENAPIVENDAVLYTPLYWNFSKFKRSYELMENMLKVYIYKEGEKPILHQPVLKGIYA 439
S IENAPIV+ND LY P+Y N S FKRSYELME LKVY+Y+EG +PILH P L GIYA
Sbjct: 218 SEIENAPIVKNDPNLYGPIYHNVSMFKRSYELMEERLKVYVYREGARPILHSPFLTGIYA 277
Query: 440 SEGWFMKHLEASKKFVTKKPRKDPPVLLTF 469
SEGWFMK +EA+K+FVTK P+K L F
Sbjct: 278 SEGWFMKLMEANKRFVTKNPKKAHLFYLPF 307
>IMGA|Medtr4g159530.1 Exostosin-like chr04_pseudomolecule_IMGAG_V3
40261175-40264558 E EGN_Mt090430 20090702
Length = 614
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 87/149 (58%), Gaps = 3/149 (2%)
Query: 316 NIAKL--NENSPVTTNFELKKM-PKLPISGVISVSEMNXXXXXXXXXXXXXXXXXXXAVD 372
I KL ++ S N ++KM +P + + EMN +D
Sbjct: 180 QIKKLPASDKSTAANNITVRKMRCNMPPKSRMLIQEMNHLLERRRTSSRAMKARWKSKLD 239
Query: 373 QELLHAKSLIENAPIVENDAVLYTPLYWNFSKFKRSYELMENMLKVYIYKEGEKPILHQP 432
E+ A+S IE+AP V ND LY PL+ N S FKRSYELME LKVYIY EG KPI HQP
Sbjct: 240 MEIFAARSEIEHAPTVTNDKELYAPLFRNHSMFKRSYELMELTLKVYIYMEGNKPIFHQP 299
Query: 433 VLKGIYASEGWFMKHLEASKKFVTKKPRK 461
+LKG+YASEGWFMK +E +K+FV K P K
Sbjct: 300 ILKGLYASEGWFMKLMEENKQFVVKDPAK 328
>IMGA|AC235664_16.1 Exostosin-like AC235664.1 66545-63524 E
EGN_Mt090430 20090702
Length = 550
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/98 (58%), Positives = 71/98 (72%)
Query: 372 DQELLHAKSLIENAPIVENDAVLYTPLYWNFSKFKRSYELMENMLKVYIYKEGEKPILHQ 431
D+ELL AK IENA ++ + L+ P+Y SKF RSYELME LKVYIY+EGEKPI HQ
Sbjct: 182 DRELLAAKIEIENANVLLKSSGLHAPVYREVSKFSRSYELMERKLKVYIYREGEKPIFHQ 241
Query: 432 PVLKGIYASEGWFMKHLEASKKFVTKKPRKDPPVLLTF 469
P ++GIYASEGWFMK +E +K+F+ K P+K L F
Sbjct: 242 PKMRGIYASEGWFMKLMEGNKRFIVKDPKKAHLFYLPF 279
>IMGA|Medtr8g105490.1 Exostosin-like chr08_pseudomolecule_IMGAG_V3
23316367-23314295 E EGN_Mt090430 20090702
Length = 342
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 46/55 (83%)
Query: 407 RSYELMENMLKVYIYKEGEKPILHQPVLKGIYASEGWFMKHLEASKKFVTKKPRK 461
+SYELME +LKVYIY++G +PI H P LKGIYASEGWFMK ++ +K+FVTK P +
Sbjct: 2 KSYELMETVLKVYIYRDGSRPIFHNPSLKGIYASEGWFMKLMQENKQFVTKDPER 56
>IMGA|Medtr1g073800.1 Exostosin-like chr01_pseudomolecule_IMGAG_V3
14807953-14805083 H EGN_Mt090430 20090702
Length = 508
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 375 LLHAKSLIENAPIVEN----DAVLYTPLYWNFSKFKRSYELMENMLKVYIYKEGEKPILH 430
LLHA++ I A D V P+YWN F RSY ME KV++Y+EGE P+ H
Sbjct: 133 LLHARAAIREASYSTQTQDPDYVPIGPMYWNAKAFHRSYLEMEKQFKVFVYEEGEPPVFH 192
Query: 431 QPVLKGIYASEGWFMKHLEASKKFVTKKPRKDPPVLLTF 469
K IY+ EG F+ +E + +F T+ P+K L F
Sbjct: 193 NGPCKSIYSMEGNFIHAIELNDQFRTRDPQKAHVYFLPF 231
>IMGA|Medtr3g109550.1 Exostosin-like chr03_pseudomolecule_IMGAG_V3
27470193-27472459 H EGN_Mt090430 20090702
Length = 450
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 59/109 (54%), Gaps = 10/109 (9%)
Query: 371 VDQELLHAKSLIENAPIVENDAVL-------YTP---LYWNFSKFKRSYELMENMLKVYI 420
V+ L A++LI+ A + ND V+ Y P +Y N F RSY+LME + K+++
Sbjct: 69 VEGSLAKARALIKQALLRTNDTVVPLEDSHDYVPQGHIYRNAFAFHRSYQLMEKLFKIFV 128
Query: 421 YKEGEKPILHQPVLKGIYASEGWFMKHLEASKKFVTKKPRKDPPVLLTF 469
Y+EGE P+ H K IY+ EG F+ LE + F T+ P + L F
Sbjct: 129 YEEGEPPLFHYGPCKNIYSMEGIFINLLENNTLFRTQNPNEAHVYFLPF 177
>IMGA|Medtr3g137610.1 Exostosin-like chr03_pseudomolecule_IMGAG_V3
34942865-34938786 H EGN_Mt090430 20090702
Length = 481
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 398 LYWNFSKFKRSYELMENMLKVYIYKEGEKPILHQPVLKGIYASEGWFMKHLE-ASKKFVT 456
+Y N F +SY ME + KVY+Y +G+ PI+H K IY++EG F+ +E KF T
Sbjct: 133 VYHNSRLFYQSYLEMEKIFKVYVYPDGDLPIVHDGPCKDIYSTEGRFLHEMERGVGKFRT 192
Query: 457 KKPRKDPPVLLTF 469
P L F
Sbjct: 193 NDPNAAHVYFLPF 205