Jatropha Genome Database
- JcCB0290201.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0290201.10 - phase: 1 /TE/partial
(1438 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr5g072700.1 Retrotransposon gag protein; Polynucleotidy... 957 0.0
IMGA|Medtr4g079130.1 Polynucleotidyl transferase, Ribonuclease H... 944 0.0
IMGA|Medtr4g080020.1 Polynucleotidyl transferase, Ribonuclease H... 709 0.0
IMGA|AC235009_2.1 Retrotransposon gag protein; Polynucleotidyl t... 578 e-165
IMGA|Medtr5g048830.1 Polynucleotidyl transferase, Ribonuclease H... 564 e-161
IMGA|CU179634_24.1 Polynucleotidyl transferase, Ribonuclease H f... 519 e-147
IMGA|Medtr8g044140.1 Retrotransposon gag protein; Polynucleotidy... 441 e-123
IMGA|Medtr4g062320.1 Retrotransposon gag protein; Polynucleotidy... 438 e-123
IMGA|Medtr2g104160.1 Retrotransposon gag protein; Polynucleotidy... 437 e-122
IMGA|AC235005_1.1 Retrotransposon gag protein; Polynucleotidyl t... 390 e-108
IMGA|Medtr2g038510.1 Polynucleotidyl transferase, Ribonuclease H... 390 e-108
IMGA|Medtr4g157510.1 Retrotransposon gag protein; Polynucleotidy... 375 e-104
IMGA|Medtr1g140330.1 Polynucleotidyl transferase, Ribonuclease H... 366 e-101
IMGA|Medtr7g045790.1 Polynucleotidyl transferase, Ribonuclease H... 353 5e-97
IMGA|Medtr8g044870.1 Reverse transcriptase, identical chr08_pseu... 313 3e-85
IMGA|Medtr5g086550.1 Reverse transcriptase, RNA-dependent DNA po... 301 2e-81
IMGA|Medtr8g044860.1 Zinc finger, C2H2-type; Polynucleotidyl tra... 290 5e-78
IMGA|Medtr5g103970.1 Polynucleotidyl transferase, Ribonuclease H... 289 9e-78
IMGA|Medtr4g157500.1 polyprotein-like, putative chr04_pseudomole... 258 2e-68
IMGA|Medtr7g025490.1 Reverse transcriptase, RNA-dependent DNA po... 249 7e-66
IMGA|Medtr1g013560.1 Polynucleotidyl transferase, Ribonuclease H... 221 2e-57
IMGA|Medtr7g045780.1 Retrotransposon gag protein chr07_pseudomol... 203 5e-52
IMGA|Medtr3g058930.1 Polynucleotidyl transferase, Ribonuclease H... 183 6e-46
IMGA|Medtr7g123950.1 Retrotransposon gag protein chr07_pseudomol... 175 2e-43
IMGA|Medtr8g044880.1 polyprotein-like, putative chr08_pseudomole... 167 2e-41
IMGA|Medtr5g086570.1 Ty1/copia-element polyprotein, related chr0... 159 1e-38
IMGA|Medtr6g069740.1 Zinc finger, C4-type chr06_pseudomolecule_I... 155 2e-37
IMGA|Medtr3g019580.1 Retrotransposon gag protein chr03_pseudomol... 152 2e-36
IMGA|Medtr7g126870.1 hypothetical protein chr07_pseudomolecule_I... 151 2e-36
IMGA|Medtr5g093020.1 Polynucleotidyl transferase, Ribonuclease H... 150 5e-36
IMGA|Medtr6g069750.1 Reverse transcriptase, putative chr06_pseud... 140 6e-33
IMGA|Medtr5g086720.1 4D11_12, related chr05_pseudomolecule_IMGAG... 135 1e-31
IMGA|Medtr3g110550.1 Reverse transcriptase, RNA-dependent DNA po... 133 6e-31
IMGA|Medtr5g086750.1 Reverse transcriptase, RNA-dependent DNA po... 101 3e-21
IMGA|Medtr8g005190.1 Integrase, catalytic region, related chr08_... 96 1e-19
IMGA|Medtr3g080970.1 Retrotransposon gag protein chr03_pseudomol... 94 4e-19
IMGA|Medtr3g068700.1 Polynucleotidyl transferase, Ribonuclease H... 88 2e-17
IMGA|Medtr3g169320.1 Polynucleotidyl transferase, Ribonuclease H... 86 2e-16
IMGA|Medtr5g032700.1 Polynucleotidyl transferase, Ribonuclease H... 83 1e-15
IMGA|Medtr5g049200.1 retroelement pol polyprotein-like, related ... 81 4e-15
IMGA|Medtr8g101650.1 Putative retroelement pol polyprotein, chr0... 80 6e-15
IMGA|Medtr3g058920.1 Polynucleotidyl transferase, Ribonuclease H... 79 1e-14
IMGA|Medtr4g025100.1 Integrase, catalytic region; Zinc finger, C... 78 4e-14
IMGA|CU571152_16.1 Polynucleotidyl transferase, Ribonuclease H f... 77 9e-14
IMGA|Medtr5g099250.1 Reverse transcriptase, RNA-dependent DNA po... 76 1e-13
IMGA|Medtr3g079600.1 Polynucleotidyl transferase, Ribonuclease H... 73 1e-12
IMGA|Medtr7g021510.1 Integrase, catalytic region; Zinc finger, C... 72 3e-12
IMGA|AC235756_37.1 Copia protein, related AC235756.1 212505-2122... 68 4e-11
IMGA|Medtr8g128710.1 Polynucleotidyl transferase, Ribonuclease H... 67 5e-11
IMGA|Medtr3g083340.1 Integrase, catalytic region, related chr03_... 67 7e-11
IMGA|Medtr3g083290.1 Integrase, catalytic region, putative chr03... 67 9e-11
IMGA|Medtr5g015200.1 Helix-turn-helix, AraC type chr05_pseudomol... 65 2e-10
IMGA|Medtr3g162300.1 retrotransposon like protein, putative chr0... 64 4e-10
IMGA|Medtr5g086740.1 Reverse transcriptase, RNA-dependent DNA po... 64 6e-10
IMGA|Medtr8g043330.1 F6N18.1, related chr08_pseudomolecule_IMGAG... 63 1e-09
IMGA|Medtr3g089920.1 Polynucleotidyl transferase, Ribonuclease H... 62 2e-09
IMGA|Medtr3g101210.1 Reverse transcriptase, RNA-dependent DNA po... 60 1e-08
IMGA|Medtr6g036540.1 Zinc finger, CCHC-type chr06_pseudomolecule... 59 2e-08
IMGA|Medtr8g015810.1 Ty1/copia-element polyprotein, putative chr... 59 2e-08
IMGA|Medtr7g135120.1 Copia protein, related chr07_pseudomolecule... 58 4e-08
IMGA|Medtr5g076530.1 Polynucleotidyl transferase, Ribonuclease H... 57 5e-08
IMGA|Medtr8g012170.1 polyprotein, putative chr08_pseudomolecule_... 57 8e-08
IMGA|Medtr5g007330.1 Integrase, catalytic region, related chr05_... 57 8e-08
IMGA|Medtr2g055600.1 Putative receptor kinase, , identical chr02... 55 2e-07
IMGA|AC137826_20.1 hypothetical protein AC137826.21 78161-79047 ... 53 9e-07
IMGA|Medtr4g045010.1 Polynucleotidyl transferase, Ribonuclease H... 53 1e-06
IMGA|Medtr4g045170.1 hypothetical protein chr04_pseudomolecule_I... 52 1e-06
IMGA|Medtr3g040850.1 Retrotransposon gag protein chr03_pseudomol... 51 3e-06
IMGA|Medtr5g029040.1 LTRGag-pol-polymerase 3, related chr05_pseu... 51 5e-06
IMGA|Medtr7g009950.1 hypothetical protein chr07_pseudomolecule_I... 50 6e-06
>IMGA|Medtr5g072700.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr05_pseudomolecule_IMGAG_V3 25937763-25933415 H
EGN_Mt090430 20090702
Length = 1413
Score = 957 bits (2474), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 568/1478 (38%), Positives = 800/1478 (54%), Gaps = 151/1478 (10%)
Query: 1 PFRAPGFSLVNTPLTGQNYLSWSRSVQIALRAKKKLGFINGKIKPPSPESDDYDR--WLT 58
P P LV L G NYL+WSRS+ A K KL F++G ++ P+ DD +R W
Sbjct: 17 PSEGPNSVLVTPLLDGTNYLAWSRSMIRAFVVKNKLKFVDGYME--IPDEDDLNRSAWER 74
Query: 59 ADSMVVSWLLNAISKDISNAFVFCKNAKALWDELKQRYGESNGPMIYQIEREIAGYKQGN 118
+ ++ SW++N++S I+ VF +NA W +LK+R+ +++ I + +I KQG+
Sbjct: 75 CNHLIQSWIINSVSPPIAQTLVFHENAVDGWSDLKERFSKADKIRIASLRSKINNMKQGS 134
Query: 119 TSVTDYYTNLKRRWDELSCLAPLPIC-------CDSGTAIADYDNNRRLMQFLMGLGDEY 171
SV +Y+T +K W+EL+ P+P C C + Y ++MQFL+GL D++
Sbjct: 135 KSVLEYFTEMKTLWEELNSHRPMPHCTCPHPCRCAAMRETRQYRIEDQVMQFLIGLNDQF 194
Query: 172 DNVKNQILLQDPLPSLNKAFSMIISVEKQREVQTDSTASSETAAVMLAQ----RNPTGTR 227
+ VK QIL+ DP+PS+N+ + +++ Q E S ASS T + R P G R
Sbjct: 195 NVVKTQILMLDPIPSINRVYYLVV----QEESNNLSLASSITEPFSVVNAADSRKPQG-R 249
Query: 228 GNARAGYTRNLSSARKEERKKQYCSKCKTTGHTIDDCFLIHGYPDWFIELQRKKGVDVRK 287
G R S+ K R+ C+ C + HT+D C+ HG+P++ K+ V
Sbjct: 250 G-------RGYSNGYKPPRQ---CTFCGKSNHTVDYCYQKHGHPNF-----PKQNSSVNA 294
Query: 288 YYSANNV-VRVASADDPLNLVVPQQKGMDSLNTGMPDYLLQEFQKFLTAKDSSSAHVEGD 346
S ++V + S + Q+ D + LLQ+ A +S+
Sbjct: 295 SSSNDDVEAQPGSCSASPSSSSISQEQYDQFLS-----LLQQVNLLPVASTPTSSATANH 349
Query: 347 VRNVNFAGTLL------NSVFTSINFNCKDNWIIDTGATDHITPHLSFYDHVIKLNPPTT 400
V + + + +S+F+ + D W +D+GA +HI ++ K+NP
Sbjct: 350 VHTSSTSDSAFPIQSGISSIFSCSISSKSDVWFLDSGANEHIVSSTHWFTSFHKINP-KP 408
Query: 401 IRLPDNSTRLVTHIGNIRLNARIVLYNVLYVPSFSCNLLSISLLTRTCGLSVHSFPEY-- 458
+ LP+ ++ LV + G I + +VLY PSF+ NL+SI + C S+H + +
Sbjct: 409 VNLPNGTSVLVEYAGTIHFTPHFYIEDVLYSPSFTLNLISI---FKVCS-SLHCYASFHD 464
Query: 459 --CLFQDLLTSEVLARGTVIRDLYYLTKDSFSKQINCNSVARCSEHNTHLALLWHARLGH 516
C QDL + +++ G +R L LGH
Sbjct: 465 KKCFLQDLHSQKMIGLGEQVRGL----------------------------------LGH 490
Query: 517 VSFKRLKH---------VDGVAHCDYTELMCSVCPVAKQTRLSFPTSVISSVHVFDLVHI 567
VS KRL H VD A CD +C AKQ +LSFPTSV + F+L+H
Sbjct: 491 VSNKRLNHMSHLYPTLTVDNHATCD-------ICQFAKQKKLSFPTSVSVASSKFELLHF 543
Query: 568 DLWGPYKLKSITNAVYMLTIVDDYSRFCWTYMLKTKDQVLLALKSFFNYVLTHYDKRVKA 627
D+WGP + SI N Y LTI+DDYS F W +LK+K +V +K+F N + T Y K
Sbjct: 544 DIWGPLAVTSIHNHRYFLTILDDYSIFFWIVLLKSKYEVSQHVKNFINLIHTQYHITPKV 603
Query: 628 IRTDNGTEFVNAACSTFLQDHGTLHQRTCVYTPQQNGVVERKHRTLLNIARTLLFQSKFP 687
+R+DNG EF+ ++F G +H ++CV TPQQNG VERKH+ +LN+ R LLFQSK P
Sbjct: 604 VRSDNGPEFL---LNSFYASKGIVHHKSCVETPQQNGRVERKHQHILNVGRALLFQSKLP 660
Query: 688 SIFWSELLLAATHIANRLPSENLDWKTPYERLHGKQVNYSYFRTIGCLCYATNTVPHKQK 747
S +WS LL A I NR+ S L K+PY+ LHG + F+ G LCY+T H+ K
Sbjct: 661 SSYWSYALLHAIFIINRVTSPTLHNKSPYQLLHGTIPDVQTFKVFGSLCYSTTLQSHRTK 720
Query: 748 FDPRAFPCALLGYAQNQKAYKLYCLTTKSILVSRDVVFMENIFPFHQTNPTDVTTFVLPK 807
RA LGYA K Y L + T+ I +SR V F E+I P+ TNP+
Sbjct: 721 LSARARKTVFLGYAVGYKGYVLLDIHTREIHISRHVQFHEHILPY-PTNPS--------- 770
Query: 808 CAVDTDPTFFESQITNTPQXXXXXXXXXXXXXXXXXXXXXXXXXXXNLLVSPARNDGIPC 867
+ T +F S + + P
Sbjct: 771 -TITTTWDYFSSDSCSASNPLPKSSTISPIIPPP------------------FIDVDTPP 811
Query: 868 EVDDAAISKNIVPLPEVRRSTRTXRPPAWLNEYDTGTSSTSQI------------NFTTS 915
D+ ++S P P +R+S+R +PP L +Y S + N ++S
Sbjct: 812 SDDNHSVSPIPQP-PVIRKSSRITQPPTHLQDYVCSVSDDTSFVQYPISHYLSYNNLSSS 870
Query: 916 HMFFIAQLSKIKEPCNYNDAKQNMNWVNAMNNELASLEQNNTWILTDLPPNTKPVGCKWV 975
H F L EP Y +A + W AM EL++LE TW L DLPPN KP+ C+W+
Sbjct: 871 HCAFALSLDSHTEPTTYAEASKFDCWKQAMQVELSALENTGTWKLVDLPPNVKPIVCRWI 930
Query: 976 YRIKYNADGSIDRYKARLVAKGYNQLLGLDYLHTFSPVAKLVTVRVFLTIAVANSWSVQH 1035
Y+IK++ADGSI+RYKARLVAKGYNQ+ GLDY T+SPVAKL TVR + +A N+W +
Sbjct: 931 YKIKHHADGSIERYKARLVAKGYNQIEGLDYFDTYSPVAKLTTVRTIIALAYMNNWHIHQ 990
Query: 1036 LDINNAYLHGTIDEDIYMQIPPGYDKAAEGQVCKLQRSLYGLKQAGRQWNKALTTSLLSQ 1095
LD+NNA+LHG + ED+YM +P G + QVCKL +SLYGLKQA R+W + LT+ L+
Sbjct: 991 LDVNNAFLHGDLQEDVYMIVPQGITPSKSNQVCKLIKSLYGLKQASRKWYEKLTSLLVHH 1050
Query: 1096 GFTQSSFDHCLFTKGCGASFIALLVYVDDCLITSPSVTLISQLKTYLDQKFTIKNLGDVK 1155
+ QS+ DH LF K SF ALLVYVDD +IT S++ +K L IK+LG +K
Sbjct: 1051 HYLQSTSDHSLFIKKTYTSFTALLVYVDDVIITGTSLSEFQDIKAILHSALEIKDLGQLK 1110
Query: 1156 YFLGIEVARADDGMFLTQHKFISEIIQDTGLQDAKIAHSPYIQGMKLGTDMGHPLPDPGS 1215
YFLG+EVA + G+ L Q K+ +++ D G AK A +P KL D G P D S
Sbjct: 1111 YFLGLEVAHSSQGISLCQRKYCLDLLTDIGFLAAKPASTPSDPSCKLHADGGPPFSDIPS 1170
Query: 1216 YRRLVGRLLYLSMTRPDISYAVQQLSQFMQVPHHSHLKAALTVVKYLKGTSFTGLFLPAK 1275
YRRL+GRL+YL+ TRP I++A QQLSQF+ P H AA +++YLK + GLF P
Sbjct: 1171 YRRLIGRLIYLTNTRPYITFATQQLSQFLNSPTEKHYIAATRILRYLKKSPGQGLFFPRD 1230
Query: 1276 NDLKLRAFSDADWASCSDSRRSITGFCIFLGTSLISWKTKKQSTVSRSSAESEYRAMAST 1335
+ L L +SDADWA C DSRRSI+G C FLG SLISWKTKKQ TVSRSS+E+EYRA+ +
Sbjct: 1231 SSLFLSGYSDADWAGCLDSRRSISGQCFFLGHSLISWKTKKQLTVSRSSSEAEYRALGAA 1290
Query: 1336 VCEIQWLTSLLTDFHIHIARPIPLHCDNKAAIHIAANPVFHERTKHIDIDCHVVRSQLQA 1395
CE+QWL LL D H+ + L+CDN++A+HIAANPVFHERTKH++IDCH+VR +LQA
Sbjct: 1291 TCELQWLLYLLHDLHVTTVKLHVLYCDNQSALHIAANPVFHERTKHLEIDCHLVREKLQA 1350
Query: 1396 GLISTPHLPSNMQLADMFTKSLPSHSYRTFVSKLGLVD 1433
++ + S QLAD FTK L + T + KLG+++
Sbjct: 1351 CIMKLLPVTSADQLADFFTKPLLPQPFHTLLFKLGMLN 1388
>IMGA|Medtr4g079130.1 Polynucleotidyl transferase, Ribonuclease H fold
chr04_pseudomolecule_IMGAG_V3 15761100-15765439 H
EGN_Mt090430 20090702
Length = 1414
Score = 944 bits (2441), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/1496 (37%), Positives = 801/1496 (53%), Gaps = 169/1496 (11%)
Query: 1 PFRAPGFSLVNTPLTGQNYLSWSRSVQIALRAKKKLGFINGKIKPPSPESDDYDR--WLT 58
P +P + LTG NY++WSR+V+ +L K KLGFING I P P+ DD +R W
Sbjct: 18 PSESPNSLSITPKLTGSNYIAWSRTVERSLGTKNKLGFINGSI--PMPDEDDLNRAAWER 75
Query: 59 ADSMVVSWLLNAISKDISNAFVFCKNAKALWDELKQRYGESNGPMIYQIEREIAGYKQGN 118
+ +V SWL+N++S I+ VFC A +W +LK+R+ + + I + I KQG
Sbjct: 76 CNHLVQSWLINSVSDSIAPTVVFCDTALEVWLDLKERFSKIDRIRIANLRSSINNLKQGA 135
Query: 119 TSVTDYYTNLKRRWDELSCLAPLPIC-------CDSGTAIADYDNNRRLMQFLMGLGDEY 171
+V DY+T +K W+ELS P+P C C + + N ++MQFL L D++
Sbjct: 136 KTVLDYFTEMKSLWEELSSHRPIPNCVCVHQCRCLASRIAKTHRNEDQIMQFLTSLNDQF 195
Query: 172 DNVKNQILLQDPLPSLNKAFSMIISVEKQREVQTDSTASSETAAVMLAQRNPTGTRGNAR 231
V+ Q+LL DPLPSLNK +S+++ Q E S S A Q N T TR R
Sbjct: 196 SVVRTQVLLLDPLPSLNKVYSLVV----QEESNHASLPSLSVADDTSIQINATDTRRFQR 251
Query: 232 AGYTRNLSSARKEERKKQYCSKCKTTGHTIDDCFLIHGYPDWFIELQRKKGVDVRK---- 287
G + + + + C+ C T HT+D C+L HG+P+ + Q + V ++
Sbjct: 252 RG------KSYSQPKPTRLCTFCNRTNHTVDFCYLKHGFPN-VNKTQPRVNVASQEDSDA 304
Query: 288 ---------------YYSANNVVRVASADDPLNLVVPQQKGMDSLNTGMPDYLLQEFQKF 332
+S + + ++ S NLVVP
Sbjct: 305 GNSSSGSSTSANSNISFSQDQLTQLVSMLQQANLVVPAS--------------------- 343
Query: 333 LTAKDSSSAHVEGDVRNVNFAGTLLNSVFTSINF-----NCKDNWIIDTGATDHITPHLS 387
+ ++S H+ + +S ++F N W+ID+GA +HI ++
Sbjct: 344 -STPQTTSNHIAASPLISSSISASESSAGIPVSFPSSSTNKPPFWLIDSGANEHICCDIT 402
Query: 388 FYDHVIKLNPPTTIRLPDNSTRLVTHIGNIRLNARIVLYNVLYVPSFSCNLLSISLLTRT 447
F+ ++ P + LP+ + LV + G + N++ L +VLY P+F NL+S++ L +
Sbjct: 403 FFSSFYRIKP-VNVSLPNGTIVLVHYAGTVSFNSKFYLNHVLYSPNFLLNLISVAKLCES 461
Query: 448 CGLSVHSFPEYCLFQDLLTSEVLARGTVIRDLYYLTKDSFSKQIN--------CNSV--A 497
H + CL QD + +++ + LY S S + CN V +
Sbjct: 462 LTCFFHFSLDKCLIQDQQSLKMIGLAKQMDGLYKFYPSSSSCNLELFSSPTKYCNVVLPS 521
Query: 498 RCSEHNTHLA--LLWHARLGHVSFKRLKHVDGVAHCDYTELMCSVCPVAKQTRLSFPTSV 555
C++ T + LWH RLGH+S +RL+ + L +P+
Sbjct: 522 SCNKIPTFVPSDTLWHFRLGHLSKQRLQTLS----------------------LLYPSIK 559
Query: 556 ISSVHVFDLVHIDLWGPYKLKSITNAVYMLTIVDDYSRFCWTYMLKTKDQVLLALKSFFN 615
I + + DL H + +K T+ +D+SRF W +LKTK +V +K+F
Sbjct: 560 IDNKAICDLCH---FAKHKHLPFTS--------NDHSRFLWIILLKTKAEVSTHVKNFIT 608
Query: 616 YVLTHYDKRVKAIRTDNGTEFVNAACSTFLQDHGTLHQRTCVYTPQQNGVVERKHRTLLN 675
+ H+ K IRTDNG EF+ ST HG +HQ++CV TPQQNG VERKH+ +LN
Sbjct: 609 MIKNHFHTTPKFIRTDNGPEFM---LSTLYSSHGIIHQKSCVETPQQNGRVERKHQHILN 665
Query: 676 IARTLLFQSKFPSIFWSELLLAATHIANRLPSENLDWKTPYERLHGKQVNYSYFRTIGCL 735
+ R LL+QSK P +W + A + NR+P+ L+ ++PY LH K + S F+ GCL
Sbjct: 666 VGRALLYQSKLPPAYWCYAIQHAVFLINRVPTPTLNNQSPYFVLHHKLPDSSLFKVFGCL 725
Query: 736 CYATNTVPHKQKFDPRAFPCALLGYAQNQKAYKLYCLTTKSILVSRDVVFMENIFPFHQT 795
CYA+ H K RA +GY K + LY L ++ I +SR V F EN P+
Sbjct: 726 CYASTLQSHTTKLKHRARKSIFIGYQSGYKGFTLYDLHSREIFISRHVTFHENFLPY--- 782
Query: 796 NPTDVTTFVLPKCAVDTDPTF-FESQITNTPQXXXXXXXXXXXXXXXXXXXXXXXXXXXN 854
P + T P + + S TP N
Sbjct: 783 ----------PHTSSSTSPDWQYFSYFHPTP-------------------------VAPN 807
Query: 855 LLVSPARNDGIPCEVDDAAISKN---IVPLPEVRRSTRTXRPPAWLNEYDTG-------- 903
L P +D I + + I+P+ R STR P++L +Y
Sbjct: 808 LPSPPIIDDIIAPDHPSPDPTPPTSPILPIVP-RHSTRNVTAPSYLQDYICNNIHAFTYP 866
Query: 904 -TSSTSQINFTTSHMFFIAQLSKIKEPCNYNDAKQNMNWVNAMNNELASLEQNNTWILTD 962
T S S + + S FF+ L EP +Y +A + W +AM EL +LE+ TW L D
Sbjct: 867 ITHSLSHHHLSNSRSFFVMSLHTQPEPKSYAEASKLDCWKHAMQVELQALEKTGTWKLVD 926
Query: 963 LPPNTKPVGCKWVYRIKYNADGSIDRYKARLVAKGYNQLLGLDYLHTFSPVAKLVTVRVF 1022
LPPN KP+GC+W+Y++K++ADG+++RYKARLVAKGYNQ+ GLDYL T+SPVAKL TVR+
Sbjct: 927 LPPNVKPIGCRWIYKVKFHADGTVERYKARLVAKGYNQIEGLDYLDTYSPVAKLTTVRLV 986
Query: 1023 LTIAVANSWSVQHLDINNAYLHGTIDEDIYMQIPPGYDKAAEGQVCKLQRSLYGLKQAGR 1082
+ ++ N+W + LD+NNA+LHG + ED+YM +PPG + QVCKL +SLYGLKQA R
Sbjct: 987 IALSSINNWHLHQLDVNNAFLHGDLQEDVYMMVPPGIKSSKLNQVCKLTKSLYGLKQASR 1046
Query: 1083 QWNKALTTSLLSQGFTQSSFDHCLFTKGCGASFIALLVYVDDCLITSPSVTLISQLKTYL 1142
+W + LT+ L Q +TQ++ D+ LF K SF LLVYVDD ++ S++ S +K+ L
Sbjct: 1047 KWYEKLTSVLFDQHYTQATSDYSLFVKKTSTSFTVLLVYVDDIILAGNSISEFSHIKSIL 1106
Query: 1143 DQKFTIKNLGDVKYFLGIEVARADDGMFLTQHKFISEIIQDTGLQDAKIAHSPYIQGMKL 1202
D F IK+LG +KYFLGIEVA + G+ L Q K+ +++ D G +K +P +KL
Sbjct: 1107 DSLFKIKDLGQLKYFLGIEVAHSKLGISLCQRKYCLDLLADIGSLGSKPISTPSDSSIKL 1166
Query: 1203 GTDMGHPLPDPGSYRRLVGRLLYLSMTRPDISYAVQQLSQFMQVPHHSHLKAALTVVKYL 1262
D P D + RRLVGRLLYL+ TRPDI++ QQLSQF+ P +H AAL V+KYL
Sbjct: 1167 HLDSSSPFEDVPACRRLVGRLLYLNNTRPDITFITQQLSQFLSQPTQAHHSAALRVLKYL 1226
Query: 1263 KGTSFTGLFLPAKNDLKLRAFSDADWASCSDSRRSITGFCIFLGTSLISWKTKKQSTVSR 1322
K GLF P + L L+ FSDADWA C D+RRSI+G C FLG SLISW+TKKQ TVS+
Sbjct: 1227 KSCPGKGLFFPRSSSLNLQGFSDADWAGCIDTRRSISGQCFFLGNSLISWRTKKQITVSK 1286
Query: 1323 SSAESEYRAMASTVCEIQWLTSLLTDFHIHIARPIPLHCDNKAAIHIAANPVFHERTKHI 1382
SS+E+EYRA+AS CE+QW+ LL D H + L+CDN++AIHIA NPVFHERTKH+
Sbjct: 1287 SSSEAEYRALASATCELQWILYLLKDLHTTCPKLPVLYCDNQSAIHIANNPVFHERTKHL 1346
Query: 1383 DIDCHVVRSQLQAGLISTPHLPSNMQLADMFTKSLPSHSYRTFVSKLGLVDFSPPP 1438
+IDCH++R +LQ+G++ + S Q+AD FTK+L + +SKLGL++ PP
Sbjct: 1347 EIDCHLIRDKLQSGVLKLLTVSSQDQVADFFTKALLPKPFNILLSKLGLINIYQPP 1402
>IMGA|Medtr4g080020.1 Polynucleotidyl transferase, Ribonuclease H fold
chr04_pseudomolecule_IMGAG_V3 16287611-16283185 H
EGN_Mt090430 20090702
Length = 1275
Score = 709 bits (1831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/834 (45%), Positives = 503/834 (60%), Gaps = 65/834 (7%)
Query: 626 KAIRTDNGTEFVNAACSTFLQDHGTLHQRTCVYTPQQNGVVERKHRTLLNIARTLLFQSK 685
K IR DNG EF+ F HG +H ++CV TPQQNG VERKH+ +LN+ R LLFQSK
Sbjct: 459 KTIRIDNGPEFM---LKDFYASHGIIHHKSCVETPQQNGRVERKHQHILNVVRALLFQSK 515
Query: 686 FPSIFWSELLLAATHIANRLPSENLDWKTPYERLHGKQVNYSYFRTIGCLCYATNTVPHK 745
P FWS +L A + NR+ + L ++PY LH K + F+ GCLCYA+ H+
Sbjct: 516 LPPTFWSYAVLHAVFLINRVSTPLLHNQSPYLVLHNKLPSLDLFKVFGCLCYASTLQNHR 575
Query: 746 QKFDPRAFPCALLGYAQNQKAYKLYCLTTKSILVSRDVVFMENIFPFHQTNPTDVTTFVL 805
K RA LGY K Y L+ LT++ I +SR V F E I P+H+ NP+ T
Sbjct: 576 TKLQSRARKSIFLGYQSGYKGYVLFDLTSREIFISRHVSFHETILPYHK-NPSSTTA--- 631
Query: 806 PKCAVDTDPTFFESQITNTPQXXXXXXXXXXXXXXXXXXXXXXXXXXXNLLVSPARNDG- 864
D ++ S + + SP N
Sbjct: 632 -------DWNYYPSSQSYSHDQ------------------------------SPNVNHQV 654
Query: 865 -IPCEVDDAAISKNIVPLPEV----------RRSTRTXRPPAWLNEY--DTGTSSTSQI- 910
IP +DD S +++P RRS R P L +Y ++ S+T +
Sbjct: 655 HIPAVIDDILPSTHVLPPSPPYDSPPIHVSPRRSNRVRTAPLHLQDYVCNSVHSTTYPLS 714
Query: 911 ------NFTTSHMFFIAQLSKIKEPCNYNDAKQNMNWVNAMNNELASLEQNNTWILTDLP 964
N +T+H FI+ L EP Y +A ++ W AM EL +LE+ TW + DLP
Sbjct: 715 HYINYNNISTNHASFISSLQTTPEPTTYVEASKHDCWNKAMQAELLALEKTGTWDIVDLP 774
Query: 965 PNTKPVGCKWVYRIKYNADGSIDRYKARLVAKGYNQLLGLDYLHTFSPVAKLVTVRVFLT 1024
KP+GC+W+Y++K+NADGSI+RYKARLVAKGY Q+ GLDY T+SPVAKL TVR+ +
Sbjct: 775 AYVKPIGCRWIYKVKHNADGSIERYKARLVAKGYTQIEGLDYFETYSPVAKLTTVRLVIA 834
Query: 1025 IAVANSWSVQHLDINNAYLHGTIDEDIYMQIPPGYDKAAEGQVCKLQRSLYGLKQAGRQW 1084
+A ++W + LD+NNA+LHG + ED+YM +PPG + A QVCKL++SLYGLKQA RQW
Sbjct: 835 LASIHNWHLHQLDVNNAFLHGELQEDVYMILPPGINIAKPHQVCKLKKSLYGLKQASRQW 894
Query: 1085 NKALTTSLLSQGFTQSSFDHCLFTKGCGASFIALLVYVDDCLITSPSVTLISQLKTYLDQ 1144
+ LT+ L+ Q + Q+S DH LF K SF LLVYVDD ++ S+ +K+ LD
Sbjct: 895 YEKLTSVLIQQHYIQASSDHSLFIKKSSDSFTILLVYVDDIILAGTSLLEFQNIKSILDT 954
Query: 1145 KFTIKNLGDVKYFLGIEVARADDGMFLTQHKFISEIIQDTGLQDAKIAHSPYIQGMKLGT 1204
F IK+LG +KYFLGIEVA + G+ L Q K+ +++ D+G +K +P KL
Sbjct: 955 SFKIKDLGQLKYFLGIEVAHSKLGISLYQRKYCLDLLHDSGHIGSKPISTPSDPSTKLHH 1014
Query: 1205 DMGHPLPDPGSYRRLVGRLLYLSMTRPDISYAVQQLSQFMQVPHHSHLKAALTVVKYLKG 1264
D P D +YRRLVGRLLYL+ TRPDI++ QQLSQF+ P +H AAL ++YLK
Sbjct: 1015 DTSTPYDDIPAYRRLVGRLLYLNNTRPDITFITQQLSQFLSNPTIAHHNAALRTLRYLKS 1074
Query: 1265 TSFTGLFLPAKNDLKLRAFSDADWASCSDSRRSITGFCIFLGTSLISWKTKKQSTVSRSS 1324
GLF P + L L+ FSDADWA C D+R+S+TG C FLG SLISW+TKKQ+TVSRSS
Sbjct: 1075 CPGKGLFFPRNSSLTLQGFSDADWAGCLDTRKSVTGQCFFLGNSLISWRTKKQTTVSRSS 1134
Query: 1325 AESEYRAMASTVCEIQWLTSLLTDFHIHIARPIPLHCDNKAAIHIAANPVFHERTKHIDI 1384
+E+EYRA+AS CEIQWL LL D HI ++P L+CDN++A+HIAANPVFHERTKH++I
Sbjct: 1135 SEAEYRALASATCEIQWLLYLLNDLHITCSKPPVLYCDNQSALHIAANPVFHERTKHLEI 1194
Query: 1385 DCHVVRSQLQAGLISTPHLPSNMQLADMFTKSLPSHSYRTFVSKLGLVDFSPPP 1438
DCH+VR +LQAG++ + S Q+AD FTK+L ++ +SKLGL+D P
Sbjct: 1195 DCHIVREKLQAGVLKLLPVSSQDQIADFFTKALLPKTFSLLLSKLGLIDIYQRP 1248
Score = 210 bits (535), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 149/422 (35%), Positives = 211/422 (50%), Gaps = 46/422 (10%)
Query: 8 SLVNTP-LTGQNYLSWSRSVQIALRAKKKLGFINGKIKPPSPESDDYDR--WLTADSMVV 64
SLV TP G NYL+WSRS+Q AL AK KLGFING+I P P++DD +R W + +V
Sbjct: 28 SLVVTPKFNGTNYLAWSRSMQRALGAKCKLGFINGEI--PVPDADDLNRTAWERCNHLVQ 85
Query: 65 SWLLNAISKDISNAFVFCKNAKALWDELKQRYGESNGPMIYQIEREIAGYKQGNTSVTDY 124
SW+LN++S+ I+ VFC +A +W +L +R+ +++ I + I KQG SV DY
Sbjct: 86 SWILNSLSESIAQTVVFCDSASEVWQDLHERFSKTDRIRIATLRSSINILKQGTKSVLDY 145
Query: 125 YTNLKRRWDELSCLAPLPIC-------CDSGTAIADYDNNRRLMQFLMGLGDEYDNVKNQ 177
+T LK W+E S P+P C C++ + ++MQFL GL D++ VK Q
Sbjct: 146 FTELKGLWEEFSSHLPIPNCICVHPCRCEATRVAKTHRTEDQIMQFLTGLNDQFSVVKTQ 205
Query: 178 ILLQDPLPSLNKAFSMIISVEKQREVQTDSTASSETAAVMLAQRNPTGTRGNARAGYTRN 237
ILL DPLPSLNK +SM+I Q E S S + Q N + R G +
Sbjct: 206 ILLLDPLPSLNKVYSMVI----QEESNNSSIPSVSVSDDSNIQLNASDARNFQPRGKGPS 261
Query: 238 LSSARKEERKKQYCSKCKTTGHTIDDCFLIHGYPDWFIELQRKKGVDVRKYYSANNVVRV 297
S K R +CS CK T HT+D C+ HGYP+ + R SANN+ +V
Sbjct: 262 SGSNNKPTR---FCSFCKRTNHTVDFCYQKHGYPNVIKQQART---------SANNIAQV 309
Query: 298 ---ASADDPLNLVVPQQKGMDSLNTGMPDYLLQEFQKFLTAKD--SSSAHVEGDVRNVNF 352
A++ + NL V NTG+ + L + +SS+ G N
Sbjct: 310 DFDAASSNASNLNVSANS-----NTGLSQEQFTQLVSLLQQSNLVASSSPSPGPSSNTIT 364
Query: 353 AGTLLNSVF-------TSINFNCK-DNWIIDTGATDHITPHLSFYDHVIKLNPPTTIRLP 404
A L++S T I+F +W+ID+GA +HI + K+ P + L
Sbjct: 365 ATPLVSSSISATEISPTGISFPSHLTHWLIDSGANEHICCDSRCFSSFYKIKPMQVLYLM 424
Query: 405 DN 406
DN
Sbjct: 425 DN 426
>IMGA|AC235009_2.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold AC235009.1 5302-2150 H
EGN_Mt090430 20090702
Length = 1051
Score = 578 bits (1489), Expect = e-165, Method: Compositional matrix adjust.
Identities = 369/1116 (33%), Positives = 545/1116 (48%), Gaps = 164/1116 (14%)
Query: 29 ALRAKKKLGFINGKIKPPSPESDDYDR--WLTADSMVVSWLLNAISKDISNAFVFCKNAK 86
AL AK KL FING I+ PE+ D +R W + ++ SW++N++S I+ VF A
Sbjct: 4 ALGAKNKLAFINGTIQ--QPEALDLNRAAWERCNHLIHSWIINSVSDSIAQTIVFHDYAS 61
Query: 87 ALWDELKQRYGESNGPMIYQIEREIAGYKQGNTSVTDYYTNLKRRWDELSCLAPLPIC-- 144
+W++LK+R+ +++ I + I KQG +V++Y+T ++ W+EL+ PLP C
Sbjct: 62 DVWEDLKERFSKADRIRISTLRSSINNLKQGGKTVSEYFTEMRSLWEELNSHRPLPNCSC 121
Query: 145 -----CDSGTAIADYDNNRRLMQFLMGLGDEYDNVKNQILLQDPLPSLNKAFSMIISVEK 199
C++ T Y ++MQFL+GL D++ VK QILL DPLPSLNK +S++I E
Sbjct: 122 VHQCRCEASTLAHVYRVEDQIMQFLLGLNDQFSVVKTQILLMDPLPSLNKVYSLVIQEES 181
Query: 200 QREVQTDSTASSETAAVMLAQRNPTGTRGNARAGYTRNLSSARKEERKKQYCSKCKTTGH 259
+ +E + +++ + + G + Y +S+R +C+ C + H
Sbjct: 182 NHTPIL--SLPTEESNILVNATDSKKSYGRGKGYYGNQKNSSR-------HCTFCNRSNH 232
Query: 260 TIDDCFLIHGYPDWFIELQRKKGVDVRKYYSANNVVRVASADDPLNLVVPQQKGMDSLNT 319
TID C+L HG+P K + + N V V S N QQ DS
Sbjct: 233 TIDTCYLKHGFPH-----PNKSANSNTLTHGSTNSVTVESG----NTSNTQQGNGDSSGY 283
Query: 320 GMPDYLLQEFQKFLTAKDSSS---AHVEGDVRNVNFAGTL-----------LNSVFT-SI 364
++ ++ ++ V V N N T ++S F+ S
Sbjct: 284 SSFSISQDRYEHLVSLLQQATLLPTAVSPSVSNSNQLTTSQSIPLATYQSGIHSAFSCSF 343
Query: 365 NFNCKDNWIIDTGATDHI----TPHLSFYDHVIKLNPPTTIRLPDNSTRLVTHIGNIRLN 420
+ N +WIID+GA DH+ T SFY IK P + LP+ ++ V + GN+
Sbjct: 344 HVNSIPSWIIDSGANDHVCFSKTHFTSFYK--IK---PVLVTLPNGTSIYVHYAGNVHFT 398
Query: 421 ARIVLYNVLYVPSFSCNLLSISLLTRTCGLSVHSFPEYCLFQDLLTSEVLARGTVIRDLY 480
+ L +VLY P F NL+S+S + + SV+ C+ QD+ + ++ G LY
Sbjct: 399 PYLHLTHVLYSPEFKVNLISVSKICDSLSCSVNFVSNKCVIQDVTSQRMIGLGDKSDGLY 458
Query: 481 YLTKDSFSKQINC-NSVARCSEHNTHLAL-----------------------LWHARLGH 516
L+ ++Q+ NS H A LWH RLGH
Sbjct: 459 KLSMHFVNQQLQLHNSFKPLPNKVAHSACNISTSSLSKSSTVFYSSRIPESALWHFRLGH 518
Query: 517 VSFKRLKH---------VDGVAHCDYTELMCSVCPVAKQTRLSFPTSVISSVHVFDLVHI 567
+S +RL VD A CD +C A+ +L FP S + F L+H
Sbjct: 519 LSNQRLSTMSRLYPSIIVDNKAACD-------ICHFARHKKLPFPHSSSHANSKFQLLHF 571
Query: 568 DLWGPYKLKSITNAVYMLTIVDDYSRFCWTYMLKTKDQVLLALKSFFNYVLTHYDKRVKA 627
D+WGP + + Y LTIVDD++RF W +LK+K +V + +K+F + + K
Sbjct: 572 DIWGPLAINYVHGHKYFLTIVDDHTRFLWIILLKSKAEVPIHIKNFIALIENQFHITPKI 631
Query: 628 IRTDNGTEFVNAACSTFLQDHGTLHQRTCVYTPQQNGVVERKHRTLLNIARTLLFQSKFP 687
IRTDNG+EF+ F G LHQR+CV TPQQNG VERKH+ +LNI R LL+QSK P
Sbjct: 632 IRTDNGSEFL---LHDFYASKGILHQRSCVETPQQNGRVERKHQHILNIGRALLYQSKLP 688
Query: 688 SIFWSELLLAATHIANRLPSENLDWKTPYERLHGKQVNYSYFRTIGCLCYATNTVPHKQK 747
FWS L A + NR+P+ L ++PY+ L+ + + F+ GCLCYA++ H+ K
Sbjct: 689 LSFWSYAFLHAVFLINRVPTLVLQNQSPYQLLYDSSPDVTTFKVFGCLCYASSLQSHRTK 748
Query: 748 FDPRAFPCALLGYAQNQKAYKLYCLTTKSILVSRDVVFMENIFPFHQTNPTD------VT 801
+ RA LGY K LY L T+ I +SR VVF E + P+ + T
Sbjct: 749 LETRARKSVFLGYKSGFKGSVLYDLHTREIFISRHVVFHECVLPYKSNSSPQSHDWEYFT 808
Query: 802 TFVLP---KCAVDTDPTFFESQITNTPQXXXXXXXXXXXXXXXXXXXXXXXXXXXNLLVS 858
+F P DT P S IT
Sbjct: 809 SFSTPLDLPSGTDTSP---HSAIT------------------------------------ 829
Query: 859 PARNDGIPCEVDDAAISKNIVPLP---EVRRSTRTXRPPAWLNEYDTGTSSTSQI----- 910
D +P + +I+ +P R S+R PP++L ++ S++ +
Sbjct: 830 ----DIVPYTSPTPTSTSSIIDIPPPLPTRHSSRNKTPPSYLKDFICANKSSASVNSLHS 885
Query: 911 --------NFTTSHMFFIAQLSKIKEPCNYNDAKQNMNWVNAMNNELASLEQNNTWILTD 962
N + SH FI L EP +Y +A + W AM EL +LE TW + D
Sbjct: 886 ISNFVSYHNISNSHSHFILSLHAHTEPKSYTEANKFECWRQAMQVELTALENTGTWKIID 945
Query: 963 LPPNTKPVGCKWVYRIKYNADGSIDRYKARLVAKGYNQLLGLDYLHTFSPVAKLVTVRVF 1022
LP N KP+GC+W+Y++K++ADG+I+RYKARLVAKGYNQ+ GLDY T+SPVAK T+R+
Sbjct: 946 LPSNAKPIGCRWIYKVKHHADGTIERYKARLVAKGYNQVEGLDYFDTYSPVAKHTTIRLV 1005
Query: 1023 LTIAVANSWSVQHLDINNAYLHGTIDEDIYMQIPPG 1058
L +A N+W + LD+NNA+LHG + ED+YM IPPG
Sbjct: 1006 LALASLNNWHLHQLDVNNAFLHGDLQEDVYMDIPPG 1041
>IMGA|Medtr5g048830.1 Polynucleotidyl transferase, Ribonuclease H fold
chr05_pseudomolecule_IMGAG_V3 20699955-20695616 H
EGN_Mt090430 20090702
Length = 1396
Score = 564 bits (1454), Expect = e-161, Method: Compositional matrix adjust.
Identities = 283/563 (50%), Positives = 375/563 (66%), Gaps = 9/563 (1%)
Query: 885 RRSTRTXRPPAWLNEY--DTGTSSTSQIN-------FTTSHMFFIAQLSKIKEPCNYNDA 935
R STR P++L +Y ++ S+T I+ ++ H ++ L EP Y +A
Sbjct: 814 RHSTRNKISPSYLQDYVCNSINSTTYPISHYLSHNKLSSHHSSYVLSLHTHNEPKTYAEA 873
Query: 936 KQNMNWVNAMNNELASLEQNNTWILTDLPPNTKPVGCKWVYRIKYNADGSIDRYKARLVA 995
++ W AM EL +LEQ TW DLPPN KP+GC+WV++IK +ADGSI+RYKARLVA
Sbjct: 874 NKHECWQKAMQVELQALEQTGTWNFVDLPPNVKPIGCRWVFKIKRHADGSIERYKARLVA 933
Query: 996 KGYNQLLGLDYLHTFSPVAKLVTVRVFLTIAVANSWSVQHLDINNAYLHGTIDEDIYMQI 1055
KGY Q+ GLDY TFSPVAKL TVR+ + +A N W + LD+NNA+LHG + E++YM +
Sbjct: 934 KGYTQVEGLDYFDTFSPVAKLTTVRLIIALASINHWHLHQLDVNNAFLHGDLQENVYMTL 993
Query: 1056 PPGYDKAAEGQVCKLQRSLYGLKQAGRQWNKALTTSLLSQGFTQSSFDHCLFTKGCGASF 1115
PPG VCKL +SLYGLKQA R+W LT+ LL +TQ+ DH LFTK G S+
Sbjct: 994 PPGISAKHSNTVCKLNKSLYGLKQASRKWYDKLTSILLKHQYTQAHSDHSLFTKKTGTSY 1053
Query: 1116 IALLVYVDDCLITSPSVTLISQLKTYLDQKFTIKNLGDVKYFLGIEVARADDGMFLTQHK 1175
LLVYVDD ++ S+ +K+ LD F IK+LG +K+FLG+EVA + G+ L Q K
Sbjct: 1054 TILLVYVDDIILAGDSLEEFQYIKSILDTLFKIKDLGQLKFFLGLEVAHSQLGISLCQKK 1113
Query: 1176 FISEIIQDTGLQDAKIAHSPYIQGMKLGTDMGHPLPDPGSYRRLVGRLLYLSMTRPDISY 1235
+ +++ D+G +K A +P +KL D P D SYRRL+GRLLYL+ TRPDI+Y
Sbjct: 1114 YCLDLLADSGTIGSKPASTPSDPSLKLHKDGALPYEDIPSYRRLIGRLLYLNTTRPDITY 1173
Query: 1236 AVQQLSQFMQVPHHSHLKAALTVVKYLKGTSFTGLFLPAKNDLKLRAFSDADWASCSDSR 1295
QQLSQF+ P H+H AAL V++YLK GLF P + L+L+ +SDADWA C D+R
Sbjct: 1174 ITQQLSQFLSAPTHTHHSAALRVLRYLKNCPGKGLFFPRNSPLQLQGYSDADWAGCLDTR 1233
Query: 1296 RSITGFCIFLGTSLISWKTKKQSTVSRSSAESEYRAMASTVCEIQWLTSLLTDFHIHIAR 1355
RSI+G C FLG SLISW+TKKQ TVSRSS+E+EYRA+AS CE+QWL LL D H+ +
Sbjct: 1234 RSISGQCFFLGNSLISWRTKKQVTVSRSSSEAEYRALASATCELQWLIYLLQDLHVTCTK 1293
Query: 1356 PIPLHCDNKAAIHIAANPVFHERTKHIDIDCHVVRSQLQAGLISTPHLPSNMQLADMFTK 1415
L CDN++A+HIAANPVFHERTKH++IDCH+VR +L +G++ + S Q+AD FTK
Sbjct: 1294 LPVLFCDNQSALHIAANPVFHERTKHLEIDCHIVREKLHSGILKLLPVSSKEQVADFFTK 1353
Query: 1416 SLPSHSYRTFVSKLGLVDFSPPP 1438
SL + +SKL L+D PP
Sbjct: 1354 SLHPQPFNLLLSKLSLLDIYQPP 1376
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 250/807 (30%), Positives = 402/807 (49%), Gaps = 78/807 (9%)
Query: 1 PFRAPGFSLVNTPLTGQNYLSWSRSVQIALRAKKKLGFINGKIKPPSPESDDYDR--WLT 58
P P +V+ L G NYL+W+RS++ +L K KLGFING I+ P+ DD +R W
Sbjct: 18 PSEGPSSLIVSPKLDGSNYLAWNRSMKRSLGTKNKLGFINGSIE--QPDLDDLNRSAWER 75
Query: 59 ADSMVVSWLLNAISKDISNAFVFCKNAKALWDELKQRYGESNGPMIYQIEREIAGYKQGN 118
+ +V SW++N++S I+ VF A +W +L +R+ +++ I + I KQG
Sbjct: 76 CNFLVQSWIINSVSDSIAQTVVFYDTAYEVWQDLHERFSKADRIRIANLRSSINNLKQGA 135
Query: 119 TSVTDYYTNLKRRWDELSCLAPLPIC-------CDSGTAIADYDNNRRLMQFLMGLGDEY 171
SV +Y+T LK W+ELS P+P C CD+ Y ++MQFL GL D +
Sbjct: 136 KSVLEYFTELKSLWEELSSHRPIPSCVCVHACRCDATRVAKIYRTEDQIMQFLTGLNDNF 195
Query: 172 DNVKNQILLQDPLPSLNKAFSMIISVEKQREVQTDSTASSETAAVMLAQRNPTGTRGNAR 231
VK Q+LL +PLP LNK +S+++ E + S ++S+ + + L ++G +
Sbjct: 196 GVVKTQVLLLNPLPPLNKVYSLVVQEESNNSLPI-SISASDDSNIQLNASEVKKSQGRGK 254
Query: 232 AGYTRNLSSARKEERKKQYCSKCKTTGHTIDDCFLIHGYPDWFIELQRKKGVDVRKYYSA 291
G+ + ++ +YC+ C T HT+D C+ +HG+P + Q+ K +
Sbjct: 255 -GFVNS-------QKPNRYCTFCHKTNHTVDFCYQLHGHPSF--PKQQSKVTASHEIPDE 304
Query: 292 NNVVRVASADDPLNLVVPQQKGMDSLNTGMPDYLLQEFQKFLTAKDSSSAHVEGD--VRN 349
N + + + L + + L ++++ HV+ V N
Sbjct: 305 NGALDHGLGGSTGSGTSLSPEQYTQLVSLLQQASLISSSSPPPTSNATTNHVQTTPFVSN 364
Query: 350 VNFAGTLLNSVFTSINFNCKDNWIIDTGATDHITPHLSFYDHVIKLNPPTTIRLPDNSTR 409
A +S + W++D+GA +HI +LSF+ + ++ P + LP+ ++
Sbjct: 365 NISASPHDTEGISSKPYY----WLLDSGANEHICSNLSFFTSLHRIKP-VRVNLPNKTSI 419
Query: 410 LVTHIGNIRLNARIVLYNVLYVPSFSCNLLSISLLTRTCGLSVHSFPEYCLFQDLLTSEV 469
+V GN+ + L N +L I L + GL ++ P D ++ +
Sbjct: 420 IVHFAGNVVFTPQFYLTND------QTSLKMIGLAKQVAGLYRYTPPS-----DFSSTSL 468
Query: 470 LARGTVIRDLYYLTKDSFSKQINCNSVARCSEHNTHLALLWHARLGHVSFKRLKHVD--- 526
+ S +K N +S++ S + +A LWH RLGH+S +R+ +
Sbjct: 469 M--------------HSPNKSCNFSSISCNSNNCIPVAALWHFRLGHLSNQRMIKMSHLY 514
Query: 527 -GVAHCDYTELMCSVCPVAKQTRLSFPTSVISSVHVFDLVHIDLWGPYKLKSITNAVYML 585
+ H + +C +C +KQ L F +S+ + F+L+H D+WGP + S+ Y L
Sbjct: 515 PSIVHNNRD--VCDICHFSKQKHLPFSSSLSHASTNFELLHFDIWGPISISSVHGHRYFL 572
Query: 586 TIVDDYSRFCWTYMLKTKDQVLLALKSFFNYVLTHYDKRVKAIRTDNGTEFVNAACSTFL 645
TI+DD+SRF W +LK+K +V L +K+F + T + K +R+DNG EF+ + F
Sbjct: 573 TILDDHSRFLWIILLKSKSEVSLHVKNFILMIRTQFHVTPKYVRSDNGPEFL---LNDFY 629
Query: 646 QDHGTLHQRTCVYTPQQNGVVERKHRTLLNIARTLLFQSKFPSIFWSELLLAATHIANRL 705
HG +HQ++CV TPQQNG VERKH+ +LN+ R LL+QSK P FWS +L A + NR+
Sbjct: 630 SSHGIIHQKSCVETPQQNGRVERKHQHILNVGRALLYQSKLPPSFWSYAILHAVFLINRV 689
Query: 706 PSENLDWKTPYERLHGKQVNYSYFRTIGCLCYATNTVPHKQKFDPRAFPCALLGYAQNQK 765
P+ L ++PY L K + F K K PRA LGY K
Sbjct: 690 PTHVLHNQSPYHVLFHKLPDIQLF---------------KSKLQPRARKSLFLGYKSGYK 734
Query: 766 AYKLYCLTTKSILVSRDVVFMENIFPF 792
Y L+ L+T+ I VSR V+F ENI P+
Sbjct: 735 GYHLFDLSTREIFVSRHVIFHENILPY 761
>IMGA|CU179634_24.1 Polynucleotidyl transferase, Ribonuclease H fold
CU179634.6 87152-89450 H EGN_Mt090430 20090702
Length = 688
Score = 519 bits (1337), Expect = e-147, Method: Compositional matrix adjust.
Identities = 282/756 (37%), Positives = 401/756 (53%), Gaps = 103/756 (13%)
Query: 543 VAKQTRLSFPTSVISSVHVFDLVHIDLWGPYKLKSITNAVYMLTIVDDYSRFCWTYMLKT 602
+A+Q+RL FP ++ +F+L+H+D+WGPY+ + N Y +T+VDD+S+ WT +L
Sbjct: 1 MARQSRLPFPPKTHTTTGIFELLHVDIWGPYQTTTHDNFKYFITLVDDFSKSTWTQLLSC 60
Query: 603 KDQVLLALKSFFNYVLTHYDKRVKAIRTDNGTEFVNAACSTFLQDHGTLHQRTCVYTPQQ 662
K LK+F V + VK IR+DNG EF + + F Q G +HQ++C YTPQQ
Sbjct: 61 KSNAFHVLKAFILMVENQFSTTVKTIRSDNGLEFTSNETTLFFQSKGIIHQKSCPYTPQQ 120
Query: 663 NGVVERKHRTLLNIARTLLFQSKFPSIFWSELLLAATHIANRLPSENLDWKTPYERLHGK 722
NGVVERKH+ +L AR LLFQSK P +WSE
Sbjct: 121 NGVVERKHKFILETARALLFQSKLPVKYWSEF---------------------------- 152
Query: 723 QVNYSYFRTIGCLCYATNTVPHKQKFDPRAFPCALLGYAQNQKAYKLYCLTTKSILVSRD 782
H+ KFDP+ P +GY K YK+ L+T+ I VSRD
Sbjct: 153 ---------------------HRTKFDPKTIPHVFVGYPYATKGYKVLNLSTQKIHVSRD 191
Query: 783 VVFMENIFPFHQT-NPTDVTTFVLPKCAVDTDPTFFESQITNTPQXXXXXXXXXXXXXXX 841
V+F E IFPF + +PT F ++ PT ++ Q ++ +
Sbjct: 192 VIFHETIFPFAMSKDPTHFPKFPFHCVSLHDYPTSYDDQDYSSKETTTSPTH-------- 243
Query: 842 XXXXXXXXXXXXNLLVSPARNDGIPCEVDDAAISKNIVPLPEVRRSTRTXRPPAWLNEYD 901
++P N P + +N +P++RRS R + P +L +Y
Sbjct: 244 ---------------ITP-ENSTSPTHI----TPENSTSIPQLRRSQRLHKTPTYLTDYV 283
Query: 902 TGTSSTSQIN--------------FTTSHMF-----------FIAQLSKIKEPCNYNDAK 936
S++ N FT H FI +S EP +Y +A
Sbjct: 284 HNVPSSTVSNSQPPQPHSLPLNALFTLKHYVSPDVFSFDSQSFIMNISHDCEPNSYEEAS 343
Query: 937 QNMNWVNAMNNELASLEQNNTWILTDLPPNTKPVGCKWVYRIKYNADGSIDRYKARLVAK 996
+ W AM E +L NNTW LT+LP + K VGC+WVY++K+ ADGS++RYKARLV K
Sbjct: 344 MDPAWQKAMTQEFLALHDNNTWTLTNLPKDKKSVGCRWVYKVKHKADGSVERYKARLVVK 403
Query: 997 GYNQLLGLDYLHTFSPVAKLVTVRVFLTIAVANSWSVQHLDINNAYLHGTIDEDIYMQIP 1056
GY Q G+DY TFSPV K+ TVR + A W++ LD+NNA+LHG + E++YM IP
Sbjct: 404 GYTQHHGIDYTETFSPVVKMTTVRTLIVAAAKKQWNIHQLDVNNAFLHGDLHEEVYMDIP 463
Query: 1057 PGYDKAAEGQVCKLQRSLYGLKQAGRQWNKALTTSLLSQGFTQSSFDHCLFTKGCGASFI 1116
PG + VCKL +SLYGLKQA RQW + LT +L ++G+ S D+ LF K GAS +
Sbjct: 464 PGLATPHKDLVCKLNKSLYGLKQASRQWYEKLTEALHTRGYEHSPHDYSLFYKKRGASNV 523
Query: 1117 ALLVYVDDCLITSPSVTLISQLKTYLDQKFTIKNLGDVKYFLGIEVARADDGMFLTQHKF 1176
L VYVDD L+T I +LK +LD +F IK+LG + YFLG+EV DDG+ ++Q KF
Sbjct: 524 FLGVYVDDILLTGTDTNEIDELKRFLDNQFKIKDLGRLHYFLGLEVLYKDDGILVSQRKF 583
Query: 1177 ISEIIQDTGLQDAKIAHSPYIQGMKLGTDMGHPLPDPGSYRRLVGRLLYLSMTRPDISYA 1236
+ +++++ SP +KL + G L DP YR+L+G+L +L+ TR D++Y
Sbjct: 584 VLDLLKEFNCDHMAPLSSPLDPNIKLRSHEGKVLDDPTYYRKLIGKLNFLTHTRLDLAYG 643
Query: 1237 VQQLSQFMQVPHHSHLKAALTVVKYLKGTSFTGLFL 1272
VQ LSQ+MQ P HL AA +++YLK G+F+
Sbjct: 644 VQLLSQYMQDPREPHLHAAFHMLRYLKKDPTLGVFM 679
>IMGA|Medtr8g044140.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr08_pseudomolecule_IMGAG_V3 9732923-9735744 H
EGN_Mt090430 20090702
Length = 920
Score = 441 bits (1134), Expect = e-123, Method: Compositional matrix adjust.
Identities = 271/819 (33%), Positives = 421/819 (51%), Gaps = 68/819 (8%)
Query: 8 SLVNTP-LTGQNYLSWSRSVQIALRAKKKLGFINGKIKPPSPESDDYDRWLTADSMVVSW 66
S+ TP L+ NY SW+RS++ AL AK K F++G I P+ ++ W + +V SW
Sbjct: 40 SVAITPVLSHSNYHSWARSMRRALGAKNKFDFVDGSIPVPTDFDPNFKAWNRCNMLVHSW 99
Query: 67 LLNAISKDISNAFVFCKNAKALWDELKQRYGESNGPMIYQIEREIAGYKQGNTSVTDYYT 126
++N++ I+ + VF +NA +W+ELK+R+ + + I +++ EI KQ + SVT+++T
Sbjct: 100 IMNSVEDSIAQSIVFLENAIDVWNELKERFSQGDFIRISELQCEIFSLKQDSRSVTEFFT 159
Query: 127 NLKRRWDELSCLAPLPIC-------CDSGTAIADYDNN-RRLMQFLMGLGDEYDNVKNQI 178
LK W+EL P P+C C +G A + + R ++FL GL D +D V++QI
Sbjct: 160 ALKVLWEELEAYLPTPVCACPHRCMCITGVMNAKHQHEITRSIRFLTGLNDSFDLVRSQI 219
Query: 179 LLQDPLPSLNKAFSMIISVEKQREVQTDSTASSETAAVMLAQRNPTGTRGNARAGYTRNL 238
LL +PLP++NK FSM++ E+Q ++ + E + +++ + RG N
Sbjct: 220 LLMNPLPTINKIFSMVMQHERQFKI----SIPVEDSTILVNSAGKSQGRGRGNGNSNSN- 274
Query: 239 SSARKEERKKQYCSKCKTTGHTIDDCFLIHGYPDWFIELQRKKGVDVRKYYSANNVVRVA 298
K+ CS C GHTID C+ HG+P Y N +V
Sbjct: 275 --------GKRSCSFCGRDGHTIDICYRKHGFP---------------PNYGNKNFAKVN 311
Query: 299 SADDPLNLVVPQQKGMDSLNT-----------GMPDYLLQEFQKFLTAKDSSSAHVE-GD 346
++ N +++ +D + G+ ++ L ++ +SS+ V
Sbjct: 312 NSSIEQN---EEREDLDDSKSCKGNSNTEPSFGITKEQYEQLVTLLQSQQASSSKVNLSH 368
Query: 347 VRNVNFAGTLLNSVFTSINFNCKDNWIIDTGATDHITPHLSFYDHVIKLNPPTTIRLPDN 406
V N +G S ++N + WI+D+GA+DHI + F+D + P I+LP+
Sbjct: 369 VTNHVTSGITRTSY--TMNHSSFGTWIVDSGASDHICSSIKFFDSYAPI-IPVHIKLPNG 425
Query: 407 STRLVTHIGNIRLNARIVLYNVLYVPSFSCNLLSISLLTRTCGLSVHSFPEYCLFQDLLT 466
+ + G + + ++ NVLYV F NLLS+ L V + C QD
Sbjct: 426 NMAIAKFSGTVNFSPGLIARNVLYVAEFKLNLLSVPKLCMDNNCIVTFDNDKCFIQDKSN 485
Query: 467 SEVLARGTVIRDLYYLTKDS--FSKQINCNSVARCSEHNTHLALL-----WHARLGHVSF 519
++ G +I LY+L S FS Q N V S+ ++ L WH RLGH+S
Sbjct: 486 LKMTGLGELIEGLYFLNLGSQVFS-QFNHQPVIALSQSSSSTTFLPQEALWHFRLGHLSN 544
Query: 520 KRLKHVDGVAHCDYTEL--MCSVCPVAKQTRLSFPTSVISSVHVFDLVHIDLWGPYKLKS 577
RL + C + +C +C ++ +L F S+ + H ++L+H D+WGP S
Sbjct: 545 DRLLRMQQHFPCIKVDSNSVCDICHYSRHKKLPFKLSMNKASHCYELIHFDIWGPISTHS 604
Query: 578 ITNAVYMLTIVDDYSRFCWTYMLKTKDQVLLALKSFFNYVLTHYDKRVKAIRTDNGTEFV 637
I Y +T +DDYSRF W + KTK +V ++++F + ++ +VK +RTDNG EF+
Sbjct: 605 IHGHKYFITALDDYSRFTWIMLCKTKSEVSKSVQNFILNIENQFNCKVKTVRTDNGPEFL 664
Query: 638 NAACSTFLQDHGTLHQRTCVYTPQQNGVVERKHRTLLNIARTLLFQSKFPSIFWSELLLA 697
F G HQ +CV TPQQNG VERKH+ +LN+AR LLFQSK P IFWS +L
Sbjct: 665 ---MPDFYSSKGIEHQTSCVETPQQNGRVERKHQHILNVARALLFQSKLPKIFWSYSVLH 721
Query: 698 ATHIANRLPSENLDWKTPYERLHGKQVNYSYFRTIGCLCYATNTVPHKQKFDPRAFPCAL 757
A +I NR+P+ L K+PY +G + + F+ GCL YA+ H+ KFD RA C
Sbjct: 722 AIYIINRIPTPLLQNKSPYFLRYGHDPDLNNFKVFGCLSYASTLHNHRTKFDSRAQKCVF 781
Query: 758 LGYAQNQKAYKLYCLTTKSILVSRDVVFMENIFPFHQTN 796
LGY Q K LY L K+I SR+V + E+I P+ +N
Sbjct: 782 LGYKQGIKGAILYDLNHKTIFASRNVTYHEHILPYSNSN 820
>IMGA|Medtr4g062320.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr04_pseudomolecule_IMGAG_V3 12039092-12042104 H
EGN_Mt090430 20090702
Length = 945
Score = 438 bits (1127), Expect = e-123, Method: Compositional matrix adjust.
Identities = 275/816 (33%), Positives = 418/816 (51%), Gaps = 61/816 (7%)
Query: 1 PFRAPGFSLVNTPLTGQNYLSWSRSVQIALRAKKKLGFINGKIKPPSPESDDYDRWLTAD 60
P P L++ PL G NYL+WSRS+ A AK KL FI+G ++ P + + + W +
Sbjct: 17 PSEGPNSVLISPPLDGSNYLAWSRSMIRAFGAKNKLKFIDGSMEIPDEDDLNRNAWERCN 76
Query: 61 SMVVSWLLNAISKDISNAFVFCKNAKALWDELKQRYGESNGPMIYQIEREIAGYKQGNTS 120
+V SW++N++S I+ VF +NA W +LK+R+ +++ I + +I KQG S
Sbjct: 77 HLVQSWIINSVSPQIAQTLVFHENAIDAWSDLKERFSKADIIRIASLRSKINNMKQGFKS 136
Query: 121 VTDYYTNLKRRWDELSCLAPLPIC-------CDSGTAIADYDNNRRLMQFLMGLGDEYDN 173
V +Y+T +K W+EL+ P+P C C + Y +++QFL GL D+++
Sbjct: 137 VLEYFTEMKTLWEELNSHRPMPHCTCPHPCRCAAMREARCYRLEDQVIQFLTGLNDQFNV 196
Query: 174 VKNQILLQDPLPSLNKAFSMIISVEKQREVQTDSTASSETAAVMLAQRNPTGTRGNARAG 233
VK Q+L+ DPLPS+NK +S+++ E T S + R P G RG G
Sbjct: 197 VKTQVLMLDPLPSINKVYSLVVQEESNNLSLTSSINEPFSVVNATNSRKPQG-RGR---G 252
Query: 234 YTRNLSSARKEERKKQYCSKCKTTGHTIDDCFLIHGYPDWFIELQRKKGVDVRKYYSANN 293
Y+ R+ C+ C T HT++ C+ HG+P++ ++ V+ S+N+
Sbjct: 253 YSSGFRPPRQ-------CTFCGKTNHTVEYCYQKHGHPNF---PEQHSSVNAS---SSND 299
Query: 294 VVRVASADDPLNLVVPQQKGMDSLNTGMPDYLLQEFQKFLTAKDSSSAHVEGDVRNVNFA 353
V V + + + + LLQ+ A SS+ + +
Sbjct: 300 EVEVQPGSCNTSSSTSSNISQEKYDQLLS--LLQQVNLLPAASTPSSSASANHIHTSSVP 357
Query: 354 GTL---LNSVFTSINFNCK-DNWIIDTGATDHITPHLSFYDHVIKLNPPTTIRLPDNSTR 409
+ ++S+F S + N K D W +D+GA +HI + ++ K+NP + LP+ S+
Sbjct: 358 DSTQSGISSIF-SCSINSKSDVWFLDSGANEHIVNNTHWFTSFHKINP-RPVNLPNGSSV 415
Query: 410 LVTHIGNIRLNARIVLYNVLYVPSFSCNLLSISLLTRTCGLSVHSFPEYCLFQDLLTSEV 469
LV + G IR + L NVLY PSF+ NL+SI + + + CL QDL + ++
Sbjct: 416 LVEYAGTIRFTPQFYLENVLYSPSFTLNLISIFKVCSSLNCYAIFHNKQCLLQDLHSQKM 475
Query: 470 LARGTVIRDLYYLTKDSFSKQINCNSVARCSEHNTHLALLWHARLGHVSFKRLKHVDGVA 529
+ G +YY S+S LWH RLGHVS KRL H+ +
Sbjct: 476 IGLGEQF-GVYY----SYSA-------------------LWHFRLGHVSPKRLIHMSQLY 511
Query: 530 HCDYTEL--MCSVCPVAKQTRLSFPTSVISSVHVFDLVHIDLWGPYKLKSITNAVYMLTI 587
++ C +C AKQ +L F S+ + F+L+H D+WGP + SI N Y LTI
Sbjct: 512 PTLTVDVHATCDICHFAKQKKLPFSNSISVASIKFELLHFDIWGPLSITSIHNHRYFLTI 571
Query: 588 VDDYSRFCWTYMLKTKDQVLLALKSFFNYVLTHYDKRVKAIRTDNGTEFVNAACSTFLQD 647
+DDYSR+ W +LK+K +V +K+F N + T Y+ K +R+DNG EF+ +F
Sbjct: 572 LDDYSRYVWIVLLKSKSEVSQHVKNFINLIQTQYNITPKTVRSDNGPEFL---LHSFYAS 628
Query: 648 HGTLHQRTCVYTPQQNGVVERKHRTLLNIARTLLFQSKFPSIFWSELLLAATHIANRLPS 707
G +H R+CV TPQQNG VERKH+ +LN+ R LL+QSK P +WS LL AT I NR+ S
Sbjct: 629 KGIVHHRSCVETPQQNGRVERKHQHILNVGRALLYQSKLPVSYWSYALLHATFIINRVTS 688
Query: 708 ENLDWKTPYERLHGKQVNYSYFRTIGCLCYATNTVPHKQKFDPRAFPCALLGYAQNQKAY 767
L K+PY+ LH F+ G LCY+T H+ K RA LGY K Y
Sbjct: 689 PTLHNKSPYQLLHDTIPAEHIFKVFGSLCYSTTLHSHRTKLSARARKSVFLGYTVGFKGY 748
Query: 768 KLYCLTTKSILVSRDVVFMENIFPFHQTNPTDVTTF 803
L + T+ I +SR V F E+I P+ T+ + T +
Sbjct: 749 VLLDIHTREIHISRHVQFYEHILPYPATSSSITTAW 784
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 48/104 (46%), Gaps = 17/104 (16%)
Query: 885 RRSTRTXRPPAWLNEYDTGTSSTSQI-----------------NFTTSHMFFIAQLSKIK 927
R+S R PP L +Y TS+ S + N ++SH F L
Sbjct: 838 RKSIRNTHPPTHLQDYVCNTSTASVLSDNSFVHHPISHYYSYNNLSSSHCAFAMSLDSHT 897
Query: 928 EPCNYNDAKQNMNWVNAMNNELASLEQNNTWILTDLPPNTKPVG 971
EP Y +A + W AM EL++LE TW L DLPPN KP+G
Sbjct: 898 EPTTYAEASKFDCWNQAMKVELSALENTGTWRLVDLPPNVKPIG 941
>IMGA|Medtr2g104160.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr02_pseudomolecule_IMGAG_V3 24496395-24493968 H
EGN_Mt090430 20090702
Length = 790
Score = 437 bits (1123), Expect = e-122, Method: Compositional matrix adjust.
Identities = 255/777 (32%), Positives = 409/777 (52%), Gaps = 48/777 (6%)
Query: 10 VNTPLTGQNYLSWSRSVQIALRAKKKLGFINGKIKPPSPESDDYDR--WLTADSMVVSWL 67
V LTG+NY SWS ++ AL K K F++G I P P+ DD +R W +++V +W+
Sbjct: 32 VTPQLTGENYHSWSMKMRRALAMKNKYKFVDGSI--PIPDEDDLNRPAWERCNNLVHTWI 89
Query: 68 LNAISKDISNAFVFCKNAKALWDELKQRYGESNGPMIYQIEREIAGYKQGNTSVTDYYTN 127
+N+IS I+++ VF ++A +W++LK R+ + + Q+ +EIA KQG+ +TDY+T
Sbjct: 90 INSISPSIAHSVVFIEHAIDMWNDLKDRFMRGDRIRVAQLHQEIANLKQGDHKITDYFTE 149
Query: 128 LKRRWDEL-------SCLAPLPICCDSGTAIADYDNNRRLMQFLMGLGDEYDNVKNQILL 180
L+ W+EL C P+P C + + R++QFL+GL +EY V +Q+LL
Sbjct: 150 LRGLWEELDQYRPMPQCTCPMPCTCLAMRNAKGFRAEDRVIQFLIGLNEEYQGVASQVLL 209
Query: 181 QDPLPSLNKAFSMIISVEKQREVQT-----DSTASSETAAVMLAQRNPTGTRGNARAGYT 235
DP+P +N+ FS+++ E++ + +++ T V RG Y
Sbjct: 210 MDPMPPINRVFSLVMQQERKLQYAVVSHVQNTSLEDNTGLVNAVNGQKQFGRGRGGTSYQ 269
Query: 236 RNLSSARKEERKKQYCSKCKTTGHTIDDCFLIHGYP-DWFIELQRKKGVDVRKYYSANNV 294
+ ++C+ C+ T HT++ C+ HGYP +W R G S N+
Sbjct: 270 GRGRGNGRGNGNGRFCTFCERTNHTVETCYKKHGYPPNW----GRGGG------NSYTNM 319
Query: 295 VRVASADDPLNLVVPQQKGMDSLNTGMPDYLLQEFQKFLT--AKDSSSAHVEGDVRNVNF 352
V + +N+ + ++ T D ++Q ++ K++ +V +
Sbjct: 320 VDAEDTESKINMGSTSRNDENAGITLTKD----QYQNLMSLLEKNNLETKCSANVVKGSN 375
Query: 353 AGTLLNSVFTSINFNCKDN---WIIDTGATDHITPHLSFYDHVIKLNPPTTIRLPDNSTR 409
+ +L S +F+ K N WI+DTGAT H L+++ K+ + LP+ S
Sbjct: 376 SISLFESKSLLASFDSKQNDPGWIVDTGATHHTCYDLNWFTSYSKIET-INVNLPNGSVI 434
Query: 410 LVTHIGNIRLNARIVLYNVLYVPSFSCNLLSISLLTRTCGLSVHSFPEYCLFQDLLTSEV 469
+IG ++L+ + + NVLY+P F+ NL+S+S L R + + C+ Q+ T
Sbjct: 435 EACYIGQVKLSKDLSIDNVLYLPKFAVNLISVSKLCREQNCKLEFEADICIIQEKNTLRK 494
Query: 470 LARGTVIRDLYYLTKDSFSKQINCNSVARCSEHNTHL--ALLWHARLGHVSFKRL----K 523
+ LYYL D +K N A+ H H+ +LWH RLGH+S R+ K
Sbjct: 495 IGLAKEKHGLYYLETDERNKVSVSNISAQVELHQKHVPDGVLWHLRLGHLSHDRMICMNK 554
Query: 524 HVDGVAHCDYTELMCSVCPVAKQTRLSFPTSVISSVHVFDLVHIDLWGPYKLKSITNAVY 583
V +T C VC + +Q L FP S ++ FDLVH D+WGP+ S+ Y
Sbjct: 555 MYSYVPVSPHT--ACDVCQMCRQKILPFPISSRNAKTAFDLVHFDIWGPFSTTSVHGHKY 612
Query: 584 MLTIVDDYSRFCWTYMLKTKDQVLLALKSFFNYVLTHYDKRVKAIRTDNGTEFVNAACST 643
LTI+DD +R W MLK K + +K+F + V +++++K IR+DNG EF+
Sbjct: 613 FLTILDDCTRHVWIVMLKNKSEASYQVKNFVSMVERQFERKIKMIRSDNGPEFM---LRE 669
Query: 644 FLQDHGTLHQRTCVYTPQQNGVVERKHRTLLNIARTLLFQSKFPSIFWSELLLAATHIAN 703
F G +HQR+CVYTPQQNG VER+H+ +LNI+R L+FQSK P FWS +L A ++ N
Sbjct: 670 FYDKKGIIHQRSCVYTPQQNGRVERRHQHILNISRALMFQSKLPKNFWSYAVLHAVYLIN 729
Query: 704 RLPSENLDWKTPYERLHGKQVNYSYFRTIGCLCYATNTVPHKQKFDPRAFPCALLGY 760
R+P++ L+ K+ YE L+ + + S + GCL YA+ ++ KFDP+A CA LG+
Sbjct: 730 RIPTKILNNKSSYEVLYNEVPDLSSLKVFGCLSYASTLPVNRYKFDPKARKCAFLGF 786
>IMGA|AC235005_1.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold AC235005.1 3152-790 H
EGN_Mt090430 20090702
Length = 772
Score = 390 bits (1003), Expect = e-108, Method: Compositional matrix adjust.
Identities = 252/789 (31%), Positives = 386/789 (48%), Gaps = 88/789 (11%)
Query: 29 ALRAKKKLGFINGKIKPPSPESDDYDR--WLTADSMVVSWLLNAISKDISNAFVFCKNAK 86
AL AK KL FING I+ PE+ D +R W + ++ SW++N++S I+ VF A
Sbjct: 4 ALGAKNKLAFINGTIQ--QPEALDLNRAAWERCNHLIHSWIINSVSDSIAQTIVFHDYAS 61
Query: 87 ALWDELKQRYGESNGPMIYQIEREIAGYKQGNTSVTDYYTNLKRRWDELSCLAPLPIC-- 144
+W++LK+R+ +++ I + I KQG +V++Y+T ++ W+EL+ PLP C
Sbjct: 62 DVWEDLKERFSKADRIRISTLRSSINNLKQGGKTVSEYFTEMRSLWEELNSHRPLPNCSC 121
Query: 145 -----CDSGTAIADYDNNRRLMQFLMGLGDEYDNVKNQILLQDPLPSLNKAFSMIISVEK 199
C++ T Y ++MQFL+GL D++ VK QILL DPLPSLNK +S++I E
Sbjct: 122 VHQCRCEASTLAHVYRVEDQIMQFLLGLNDQFSVVKTQILLMDPLPSLNKVYSLVIQEES 181
Query: 200 QREVQTDSTASSETAAVMLAQRNPTGTRGNARAGYTRNLSSARKEERKKQYCSKCKTTGH 259
+ +E + +++ + + G + Y +S+R +C+ C + H
Sbjct: 182 NHTPIL--SLPTEESNILVNATDSKKSYGRGKGYYGNQKNSSR-------HCTFCNRSNH 232
Query: 260 TIDDCFLIHGYPDWFIELQRKKGVDVRKYYSANNVVRVASADDPLNLVVPQQKGMDSLNT 319
TID C+L HG+P K + + N V V S N QQ DS
Sbjct: 233 TIDTCYLKHGFPH-----PNKSANSNTLTHGSTNSVTVESG----NTSNTQQGNGDSSGY 283
Query: 320 GMPDYLLQEFQKFLTAKDSSS---AHVEGDVRNVNFAGTL-----------LNSVFT-SI 364
++ ++ ++ V V N N T ++S F+ S
Sbjct: 284 SSFSISQDRYEHLVSLLQQATLLPTAVSPSVSNSNQLTTSQSIPLATYQSGIHSAFSCSF 343
Query: 365 NFNCKDNWIIDTGATDHITPHLSFYDHVIKLNPPTTIRLPDNSTRLVTHIGNIRLNARIV 424
+ N +WIID+GA DH+ + + K+ P + LP+ ++ V + GN+ +
Sbjct: 344 HVNSIPSWIIDSGANDHVCFSKTHFTSFYKIKP-VLVTLPNGTSIYVHYAGNVHFTPYLH 402
Query: 425 LYNVLYVPSFSCNLLSISLLTRTCGLSVHSFPEYCLFQDLLTSEVLARGTVIRDLYYLTK 484
L +VLY P F NL+S+S + + SV+ C+ QD+ + ++ G LY L+
Sbjct: 403 LTHVLYSPEFKVNLISVSKICDSLSCSVNFVSNKCVIQDVTSQRMIGLGDKSDGLYKLSM 462
Query: 485 DSFSKQINC-NSVARCSEHNTHLAL-----------------------LWHARLGHVSFK 520
++Q+ NS H A LWH RLGH+S +
Sbjct: 463 HFVNQQLQLHNSFKPLPNKVAHSACNISTSSLSKSSTVFYSSRIPESALWHFRLGHLSNQ 522
Query: 521 RLKH---------VDGVAHCDYTELMCSVCPVAKQTRLSFPTSVISSVHVFDLVHIDLWG 571
RL VD A CD +C A+ +L FP S + F L+H D+WG
Sbjct: 523 RLSTMSRLYPSIIVDNKAACD-------ICHFARHKKLPFPHSSSHANSKFQLLHFDIWG 575
Query: 572 PYKLKSITNAVYMLTIVDDYSRFCWTYMLKTKDQVLLALKSFFNYVLTHYDKRVKAIRTD 631
P + + Y LTIVDD++RF W +LK+K +V + +K+F + + K IRTD
Sbjct: 576 PLAINYVHGHKYFLTIVDDHTRFLWIILLKSKAEVPIHIKNFIALIENQFHITPKIIRTD 635
Query: 632 NGTEFVNAACSTFLQDHGTLHQRTCVYTPQQNGVVERKHRTLLNIARTLLFQSKFPSIFW 691
NG+EF+ F G LHQR+CV TPQQNG VERKH+ +LNI R LL+QSK P FW
Sbjct: 636 NGSEFL---LHDFYASKGILHQRSCVETPQQNGRVERKHQHILNIGRALLYQSKLPLSFW 692
Query: 692 SELLLAATHIANRLPSENLDWKTPYERLHGKQVNYSYFRTIGCLCYATNTVPHKQKFDPR 751
S L A + NR+P+ L ++PY+ L+ + + F+ GCLCYA++ H+ K + R
Sbjct: 693 SYAFLHAVFLINRVPTLVLQNQSPYQLLYDSSPDVTTFKVFGCLCYASSLQSHRTKLETR 752
Query: 752 AFPCALLGY 760
A LGY
Sbjct: 753 ARKSVFLGY 761
>IMGA|Medtr2g038510.1 Polynucleotidyl transferase, Ribonuclease H
fold chr02_pseudomolecule_IMGAG_V3 10761249-10763836 E
EGN_Mt090430 20090702
Length = 772
Score = 390 bits (1001), Expect = e-108, Method: Compositional matrix adjust.
Identities = 244/781 (31%), Positives = 399/781 (51%), Gaps = 68/781 (8%)
Query: 1 PFRAPGFSLVNTPLTGQNYLSWSRSVQIALRAKKKLGFINGKIKPPSPESDDYDR--WLT 58
P P V LTG NYL+W+RS++ AL K K FI+G + P P DD +R W
Sbjct: 23 PSEGPNSVTVTPLLTGPNYLAWNRSMKRALGTKNKFVFIDGSV--PIPPMDDLNRTAWER 80
Query: 59 ADSMVVSWLLNAISKDISNAFVFCKNAKALWDELKQRYGESNGPMIYQIEREIAGYKQGN 118
+++++SW++N++S I+ VF + A +W EL++R+ + + + + I KQG+
Sbjct: 81 CNNLILSWIINSVSPQIAQTIVFHEYAIDVWIELQERFSKVDRIRVASLRSSINNLKQGD 140
Query: 119 TSVTDYYTNLKRRWDELSCLAPLPIC-------CDSGTAIADYDNNRRLMQFLMGLGDEY 171
SV DY+T++K W+EL+ P+P+C C+S A D+ +++QFL GL D +
Sbjct: 141 KSVLDYFTSIKSLWEELNSHRPMPMCTCPYPCRCESMRAARDFRMEDQVIQFLTGLNDSF 200
Query: 172 DNVKNQILLQDPLPSLNKAFSMIISVEKQREVQTDSTASSETAAVMLAQRNPTGTRGNAR 231
VK Q+LL DPLPS+NK +SM+I E+ + S AS+E +++++ +AR
Sbjct: 201 SVVKTQVLLIDPLPSINKVYSMVIQ-EESNIIPPTSLASNEDSSILV-------NASDAR 252
Query: 232 AGYTRNLSSARKEERKK-QYCSKCKTTGHTIDDCFLIHGYPDWFIELQRKKGVDVRKYYS 290
+ R SS + + +YC+ C+ HT++ C+L H +P+ V
Sbjct: 253 KPFLRGKSSGTSQSKNNSRYCTFCRRNNHTVEYCYLKHDFPNANKPTASSNAVTSEHAVD 312
Query: 291 ANNVVRVASADDPLNLVVPQQKGMDSLNTGMPDYLLQEFQKFLTA---KDSSSAHVEGDV 347
++ S+ L Q + S LLQ+ +A +S+ HV
Sbjct: 313 SHTSSEGTSSSSQTGLTQEQYVHLVS--------LLQQSSLVPSATPPNPASTNHVATSF 364
Query: 348 -RNVNFAGTLLNSVFTSINFNCKDNWIIDTGATDHITPHLSFYDHVIKLNPPTTIRLPDN 406
+++F +N++F+ D+W+ID+GA +HI L + ++ P + LP+
Sbjct: 365 PSSIDFTSG-INTIFSCSLHVPSDHWLIDSGANEHICSSLHLFHSYYRIK-PICVNLPNG 422
Query: 407 STRLVTHIGNIRLNARIVLYNVLYVPSFSCNLLSISLLTRTCGLSVHSFPEYCLFQDLLT 466
S+ +V + G + + + +VLY PSF L+S+S + ++ VH + QD+ T
Sbjct: 423 SSVIVQYAGTVVFSPHFHITHVLYSPSFKVYLISVSKICQSLPYHVHFLLNTYVIQDVKT 482
Query: 467 SEVLARGTVIRDLYYL---------------TKDSFSKQINCNSVARCSEHNTHLALLWH 511
+++ G + LY L +K + + + + +WH
Sbjct: 483 QKMIGLGNLCDGLYRLHPFAPASPQAHFISSAVSPTNKMSCNSVSSNNNVSSIPSNAIWH 542
Query: 512 ARLGHVSFKRLKHVDGVAHCDYTELMCSVCPVAKQTRLSFPTSVISSVHVFDLVHIDLWG 571
RLGH+S +RL + H Y+ + T + S+ SS F+L+H D+WG
Sbjct: 543 FRLGHLSNQRL----SMMHSLYSSI----------TIDNKAYSIASS--KFELLHFDIWG 586
Query: 572 PYKLKSITNAVYMLTIVDDYSRFCWTYMLKTKDQVLLALKSFFNYVLTHYDKRVKAIRTD 631
P + S+ Y LTIVDD+SRF W +LK K +V +K+F + THY K IR+D
Sbjct: 587 PLSVTSVHGHKYFLTIVDDFSRFLWVILLKNKSEVSNHVKNFVVLIHTHYQITPKYIRSD 646
Query: 632 NGTEFVNAACSTFLQDHGTLHQRTCVYTPQQNGVVERKHRTLLNIARTLLFQSKFPSIFW 691
NG EF+ F G +HQ++CV TPQQNG VERKH+ +LN+AR LLFQSK P+ FW
Sbjct: 647 NGPEFL---IPEFYASKGIIHQKSCVETPQQNGRVERKHQHILNVARALLFQSKLPNFFW 703
Query: 692 SELLLAATHIANRLPSENLDWKTPYERLHGKQVNYSYFRTIGCLCYATNTVPHKQKFDPR 751
S ++ A + N++P+ K+PY+ L+ + + F+ GCLC+A+ + + K R
Sbjct: 704 SYAVIHAVFLINKVPTPLFKQKSPYQLLYDSLPDINSFKVFGCLCFASTLLAQRSKLQSR 763
Query: 752 A 752
A
Sbjct: 764 A 764
>IMGA|Medtr4g157510.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr04_pseudomolecule_IMGAG_V3 39272474-39269703 H
EGN_Mt090430 20090702
Length = 847
Score = 375 bits (963), Expect = e-104, Method: Compositional matrix adjust.
Identities = 245/788 (31%), Positives = 374/788 (47%), Gaps = 111/788 (14%)
Query: 32 AKKKLGFINGKIKPPSPESDD--YDRWLTADSMVVSWLLNAISKDISNAFVFCKNAKALW 89
AK KL FING + P P++DD ++ W + +V SWL+N++S I+ VF NA +W
Sbjct: 31 AKNKLSFINGTL--PVPDTDDLNHNAWERCNHLVHSWLINSVSDSIAQTIVFHDNAFDVW 88
Query: 90 DELKQRYGESNGPMIYQIEREIAGYKQGNTSVTDYYTNLKRRWDELSCLAPLPIC----- 144
++LK+R+ + + I ++ + +QG SV DY+T +K W+EL PLP C
Sbjct: 89 EDLKERFSKVDRIRIARLRSSLNTLRQGAKSVLDYFTEMKALWEELHSHRPLPNCHCPFQ 148
Query: 145 --CDSGTAIADYDNNRRLMQFLMGLGDEYDNVKNQILLQDPLPSLNKAFSMIISVEKQRE 202
CD+ T Y +++QFL GL +++ VK Q+LL DPLP+LNK FS++I E
Sbjct: 149 CKCDAVTVPKSYRVEDQIIQFLTGLNEQFSVVKTQVLLMDPLPTLNKVFSLVIQKESN-N 207
Query: 203 VQTDSTASSETAAVMLAQRNPTGTRGNARAGYTRNLSSARKEERKKQYCSKCKTTGHTID 262
+ + E ++V + + ++G + Y + ++C+ C T HT+D
Sbjct: 208 ASVPAMVNLEDSSVSINAYDERKSQGRGKGAY----------NKPTRHCTFCNKTNHTVD 257
Query: 263 DCFLIHGYPDWFIELQRKKGVDVRKYYSANNVVRVASADDPLNLVVPQQKGMDSLNTGMP 322
C+ HG+P+ + + S+++V V + L Q M+ L
Sbjct: 258 FCYQKHGFPN-------ANKPNSQANASSSDVAEVDGSSGVSGL---SQDKMEQLVA--- 304
Query: 323 DYLLQE-------------FQKFLTAKDSSSAHVEGDVRNVNFAGTLLNSVFTSINFNCK 369
LLQ+ + A SS + AG + ++ +S++
Sbjct: 305 --LLQQANLIPSSSASSGSVTNHIAAPQVSSCYTTSSSLTPTSAGIINSTTCSSLS---N 359
Query: 370 DNWIIDTGATDHITPHLSFYD--HVIKLNPPTTIRLPDNSTRLVTHIGNIRLNARIVLYN 427
W++D+GA +HI L+ + H I P+ + LPD S VTH G I + + L N
Sbjct: 360 SYWLVDSGANEHICRDLNLFTSYHAIS---PSIVTLPDGSIVTVTHAGYINFSPQFYLTN 416
Query: 428 VLYVPSFSCNLLSISLLTRTCGLSVHSFPEYCLFQDLLTSEVLARGTVIRDLYYLTKDSF 487
VLY SF NL+S+ + + + P C+ QD + +++ LY
Sbjct: 417 VLYSSSFRLNLMSVHKVCESLSCTFQFLPNQCIIQDSTSLKMIGLANQQDGLY------- 469
Query: 488 SKQINCNSVARCSEHNTHLALLWHARLGHVSFKRLKHVDGVAH---CDYTELMCSVCPVA 544
+LGH+S +R+ + + D +C +C A
Sbjct: 470 -------------------------KLGHLSHQRMNMMSSLYSNIVSDNKNSVCDICHFA 504
Query: 545 KQTRLSFPTSVISSVHVFDLVHIDLWGPYKLKSITNAVYMLTIVDDYSRFCWTYMLKTKD 604
KQ L F S + F+L+H+D+WGP + SI Y LTIVDD+SRF W LKTK
Sbjct: 505 KQKHLPFSISTSHATSNFELLHLDIWGPLSISSIHGHKYFLTIVDDHSRFLWIISLKTKS 564
Query: 605 QVLLALKSFFNYVLTHYDKRVKAIRTDNGTEFVNAACSTFLQDHGTLHQRTCVYTPQQNG 664
V +KSF V T + K IR+DNG EF+ +F + G LHQ++CV TPQQNG
Sbjct: 565 GVSHHVKSFIKMVQTQFHVTPKCIRSDNGPEFL---ILSFYESLGILHQKSCVETPQQNG 621
Query: 665 VVERKHRTLLNIARTLLFQSKFPSIFWSELLLAATHIANRLPSENLDWKTPYERLHGKQV 724
VERKH +LN+ R LL+QSK P+ +WS LL A + NR P+ L+ ++PY LH K
Sbjct: 622 RVERKHHHILNVGRALLYQSKLPASYWSYALLHAVFLINRKPTPLLEGQSPYYALHHKFP 681
Query: 725 NYSYFRTIGCLCYATNTVPHKQKFDPRAFPCALLGYAQNQKAYKLYCLTTKSILVSRDVV 784
+ F K + RA LGY K + L + ++ I VSR VV
Sbjct: 682 DIDTF---------------KNQASTRARKTVFLGYKSGYKGFILLDIHSREIFVSRHVV 726
Query: 785 FMENIFPF 792
F E P+
Sbjct: 727 FHEYFLPY 734
>IMGA|Medtr1g140330.1 Polynucleotidyl transferase, Ribonuclease H
fold chr01_pseudomolecule_IMGAG_V3 31006465-31009370 H
EGN_Mt090430 20090702
Length = 883
Score = 366 bits (939), Expect = e-101, Method: Compositional matrix adjust.
Identities = 248/797 (31%), Positives = 382/797 (47%), Gaps = 102/797 (12%)
Query: 8 SLVNTP-LTGQNYLSWSRSVQIALRAKKKLGFINGKIKPPSPESDDYDRWLTADSMVVSW 66
S+ TP L+ NY SW+RS++ AL AK K F++G I P+ ++ W + +V SW
Sbjct: 40 SVAITPVLSHSNYHSWARSMRRALGAKNKFDFVDGSIPVPTDFDPNFKAWNRCNMLVHSW 99
Query: 67 LLNAISKDISNAFVFCKNAKALWDELKQRYGESNGPMIYQIEREIAGYKQGNTSVTDYYT 126
++N++ I+ + VF KNA
Sbjct: 100 IMNSVEDSIAQSIVFLKNA----------------------------------------I 119
Query: 127 NLKRRWDELSCLAPLPICCDSGTAIADYDNN-RRLMQFLMGLGDEYDNVKNQILLQDPLP 185
+L+ C P C +G A + + R ++FL GL D +D V++QILL +PLP
Sbjct: 120 DLEAYLPTPVCACPHRCMCITGVMNAKHQHEITRSIRFLTGLNDSFDLVRSQILLMNPLP 179
Query: 186 SLNKAFSMIISVEKQREVQTDSTASSETAAVMLAQRNPTGTRGNARAGYTRNLSSARKEE 245
++NK FSM++ E+Q ++ T V A ++ RGN +
Sbjct: 180 TINKIFSMVMQHERQFKISI--PVDDSTILVNSAGKSQGRGRGNGNSN-----------S 226
Query: 246 RKKQYCSKCKTTGHTIDDCFLIHGYPDWFIELQRKKGVDVRKYYSANNVVRVASADDPLN 305
K+ CS C GHTID C+ H ++ +D K N S +P
Sbjct: 227 NGKRSCSFCGRDGHTIDICYRKH----------EREDLDDSKSCKGN------SNTEPSF 270
Query: 306 LVVPQQKGMDSLNTGMPDYLLQEFQKFLTAKDSSSAHVEGDVRNV-NFAGTLLNSVFTSI 364
+ +Q ++ L ++ +SS+ V ++ +V N + + + ++
Sbjct: 271 GITKEQ--------------YEQLVTLLQSQQASSSKV--NLSHVTNHVTSGITRISYTM 314
Query: 365 NFNCKDNWIIDTGATDHITPHLSFYDHVIKLNPPTTIRLPDNSTRLVTHIGNIRLNARIV 424
N + WI+D+GA+DHI + +D + P I+LP+ + + G + + ++
Sbjct: 315 NHSSFGTWIVDSGASDHICSSIKNFDSYAPI-IPVHIKLPNGNMAIAKFSGTVTFSPGLI 373
Query: 425 LYNVLYVPSFSCNLLSISLLTRTCGLSVHSFPEYCLFQDLLTSEVLARGTVIRDLYYLTK 484
NVLYV F NLLS+ L V + C QD ++ G +I LY+L
Sbjct: 374 ARNVLYVAEFKLNLLSVPKLCMDNNCIVTFDNDKCFIQDKSNLKMTGLGELIEGLYFLNL 433
Query: 485 DS--FSKQINCNSVARCSEHNTHLALL-----WHARLGHVSFKRLKHVDGVAHCDYTEL- 536
S FS Q N V S+ ++ L WH RLGH+S RL + C +
Sbjct: 434 GSQVFS-QFNHQPVIASSQASSSTTFLPQEALWHFRLGHLSNDRLLRMQQHFPCIKVDSN 492
Query: 537 -MCSVCPVAKQTRLSFPTSVISSVHVFDLVHIDLWGPYKLKSITNAVYMLTIVDDYSRFC 595
+C +C ++ +L F S+ + H ++L+H D+WGP SI Y +T +DDYSRF
Sbjct: 493 SVCDICHYSRHKKLPFKLSMNKASHCYELIHFDIWGPISTHSIHGHKYFITALDDYSRFT 552
Query: 596 WTYMLKTKDQVLLALKSFFNYVLTHYDKRVKAIRTDNGTEFVNAACSTFLQDHGTLHQRT 655
W + KTK +V ++++F + ++ +VK +RTDNG EF+ F G HQ +
Sbjct: 553 WIMLCKTKSEVSKSVQNFILNIENQFNCKVKTVRTDNGPEFL---MPDFYSSKGIEHQTS 609
Query: 656 CVYTPQQNGVVERKHRTLLNIARTLLFQSKFPSIFWSELLLAATHIANRLPSENLDWKTP 715
CV TPQQNG VERKH+ +LN+AR LLFQSK P +FWS +L A +I NR+P+ L K+P
Sbjct: 610 CVETPQQNGRVERKHQHILNVARALLFQSKLPKVFWSYSVLHAIYIINRIPTPLLQNKSP 669
Query: 716 YERLHGKQVNYSYFRTIGCLCYATNTVPHKQKFDPRAFPCALLGYAQNQKAYKLYCLTTK 775
Y +G + + F+ GCL YA+ H+ KFD RA C LGY Q K LY L K
Sbjct: 670 YFLRYGHDPDLNNFKVFGCLSYASTLHNHRTKFDSRAQKCVFLGYKQGIKGAILYDLNHK 729
Query: 776 SILVSRDVVFMENIFPF 792
+I SR+V + E+I P+
Sbjct: 730 TIFASRNVTYHEHILPY 746
>IMGA|Medtr7g045790.1 Polynucleotidyl transferase, Ribonuclease H fold
chr07_pseudomolecule_IMGAG_V3 11036769-11039177 H
EGN_Mt090430 20090702
Length = 710
Score = 353 bits (905), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 211/572 (36%), Positives = 294/572 (51%), Gaps = 109/572 (19%)
Query: 882 PEVRRSTRTXRPPAWLNEYDTGTSSTSQIN-------------FTTSHMFFIAQLSKIKE 928
P +R S+R P++L +Y S++ +N + H FI L E
Sbjct: 232 PPIRCSSRNKISPSYLKDYICPHKSSTSVNNLYSISNYVSYHNISNPHSHFILSLHAHNE 291
Query: 929 PCNYNDAKQNMNWVNAMNNELASLEQNNTWILTDLPPNTKPVGCKWVYRIKYNADGSIDR 988
P Y +A + W AM EL +LE TW + D PPN KP+GC+W+Y+IK+NAD +I+R
Sbjct: 292 PKTYTEANKFECWRQAMQVELTALENTGTWKIIDSPPNAKPIGCRWIYKIKHNADDTIER 351
Query: 989 YKARLVAKGYNQLLGLDYLHTFSPVAKLVTVRVFLTIAVANSW--SVQHLDINNAYLHGT 1046
YKARLVAKGYNQ+ GLDY T+SPVAK T+R+ + W + L +N+ Y +
Sbjct: 352 YKARLVAKGYNQVEGLDYFDTYSPVAKHTTIRL-----ASRKWYEKLASLLVNHGYKQAS 406
Query: 1047 IDEDIYMQIPPGYDKAAEGQVCKLQRSLYGLKQAGRQWNKALTTSLLSQGFTQSSFDHCL 1106
D +++ K + Q L + + AG ++
Sbjct: 407 ADHSLFI-------KHSTTQFTALLVYVDDIILAGNSLDE-------------------- 439
Query: 1107 FTKGCGASFIALLVYVDDCLITSPSVTLISQLKTYLDQKFTIKNLGDVKYFLGIEVARAD 1166
++ + L S + + QLK YFLG+EVA +
Sbjct: 440 ------------FTFIKNILHNSFKIKDLGQLK----------------YFLGLEVAHSK 471
Query: 1167 DGMFLTQHKFISEIIQDTGLQDAKIAHSPYIQGMKLGTDMGHPLPDPGSYRRLVGRLLYL 1226
G+ L Q K+ +++ DTGL D+K +P +KL D D +YRRLVGRLLYL
Sbjct: 472 LGISLCQRKYGLDLLSDTGLLDSKPVATPSDPSIKLYHDDSPLYTDIPAYRRLVGRLLYL 531
Query: 1227 SMTRPDISYAVQQLSQFMQVPHHSHLKAALTVVKYLKGTSFTGLFLPAKNDLKLRAFSDA 1286
+ TRPDI++ QQLSQF+ P +H AAL V++YLK GL P + ++ +SDA
Sbjct: 532 NATRPDITFITQQLSQFLSKPTQTHYNAALRVLRYLKTCPGKGLHFPRSSLPYIQGYSDA 591
Query: 1287 DWASCSDSRRSITGFCIFLGTSLISWKTKKQSTVSRSSAESEYRAMASTVCEIQWLTSLL 1346
DWA C D+RRSI+G C FLG SLISW+TKKQ TVSRSS+E+EYRA+ +
Sbjct: 592 DWAGCRDTRRSISGQCFFLGDSLISWRTKKQLTVSRSSSEAEYRALGAAT---------- 641
Query: 1347 TDFHIHIARPIPLHCDNKAAIHIAANPVFHERTKHIDIDCHVVRSQLQAGLISTPHLPSN 1406
+NPVFHERTKH++IDCH+VR +L AG++ + S
Sbjct: 642 ------------------------SNPVFHERTKHLEIDCHIVREKLAAGIMKLLPISSK 677
Query: 1407 MQLADMFTKSLPSHSYRTFVSKLGLVDFSPPP 1438
QLAD FTKS+ + + + KLGLVD PP
Sbjct: 678 NQLADCFTKSILPQPFNSLLFKLGLVDIHKPP 709
Score = 154 bits (388), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 100/167 (59%), Gaps = 3/167 (1%)
Query: 626 KAIRTDNGTEFVNAACSTFLQDHGTLHQRTCVYTPQQNGVVERKHRTLLNIARTLLFQSK 685
K IRTDNG+EF+ F G LHQR+CV TPQQNG VERKH+ +LNI R LL+QSK
Sbjct: 11 KIIRTDNGSEFL---LHEFYASKGILHQRSCVETPQQNGRVERKHQHILNIGRALLYQSK 67
Query: 686 FPSIFWSELLLAATHIANRLPSENLDWKTPYERLHGKQVNYSYFRTIGCLCYATNTVPHK 745
P FWS L A + NR+P+ L +PY L+ + + F+ GCLCYA++ H+
Sbjct: 68 LPLSFWSYAFLHAVFLINRIPTPVLHNFSPYHLLYDSPPDITTFKVFGCLCYASSLQSHR 127
Query: 746 QKFDPRAFPCALLGYAQNQKAYKLYCLTTKSILVSRDVVFMENIFPF 792
K + RA LGY K Y LY L T+ I +SR VVF E + P+
Sbjct: 128 TKLETRARKSVFLGYKLGFKGYVLYDLHTREIFISRHVVFHECVLPY 174
>IMGA|Medtr8g044870.1 Reverse transcriptase, identical
chr08_pseudomolecule_IMGAG_V3 10146606-10147487 H
EGN_Mt090430 20090702
Length = 293
Score = 313 bits (803), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 143/291 (49%), Positives = 202/291 (69%)
Query: 945 MNNELASLEQNNTWILTDLPPNTKPVGCKWVYRIKYNADGSIDRYKARLVAKGYNQLLGL 1004
M +E+ +LEQ TW + DLPP KP+GC+W+++IK+N DGSI+RYKARLVAKGYNQ+ GL
Sbjct: 1 MQSEITALEQTGTWKIVDLPPAVKPIGCRWIFKIKHNVDGSIERYKARLVAKGYNQIEGL 60
Query: 1005 DYLHTFSPVAKLVTVRVFLTIAVANSWSVQHLDINNAYLHGTIDEDIYMQIPPGYDKAAE 1064
DY T+SPVAKL TVR + +A N W + D+NNA+LHG + ED+YM IPPG + +
Sbjct: 61 DYFDTYSPVAKLTTVRFIIALASINHWHLHQFDVNNAFLHGELQEDVYMIIPPGVPHSHQ 120
Query: 1065 GQVCKLQRSLYGLKQAGRQWNKALTTSLLSQGFTQSSFDHCLFTKGCGASFIALLVYVDD 1124
+VCKL +SLYGL+QA +W + LT L+S G+ Q++ D LF K +SF LLVYVDD
Sbjct: 121 DEVCKLNKSLYGLQQASMKWYEKLTNILISTGYKQAASDASLFIKHTHSSFTILLVYVDD 180
Query: 1125 CLITSPSVTLISQLKTYLDQKFTIKNLGDVKYFLGIEVARADDGMFLTQHKFISEIIQDT 1184
++ +++ + +K L F IK++G +KYFLG+EVA + G+ L Q K+ ++++D+
Sbjct: 181 VILAGDTLSEFNTIKGVLHDAFKIKDIGQLKYFLGLEVAHSKSGISLCQRKYCLDLLEDS 240
Query: 1185 GLQDAKIAHSPYIQGMKLGTDMGHPLPDPGSYRRLVGRLLYLSMTRPDISY 1235
GL +K ++P +KL D PD +YRRL+GRLLYL+ TRPDI+Y
Sbjct: 241 GLTGSKPMNTPSDPSIKLHNDSAPSFPDIPAYRRLIGRLLYLNTTRPDITY 291
>IMGA|Medtr5g086550.1 Reverse transcriptase, RNA-dependent DNA
polymerase chr05_pseudomolecule_IMGAG_V3
33218578-33217607 H EGN_Mt090430 20090702
Length = 309
Score = 301 bits (771), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 145/316 (45%), Positives = 210/316 (66%), Gaps = 14/316 (4%)
Query: 1116 IALLVYVDDCLITSPSVTLISQLKTYLDQKFTIKNLGDVKYFLGIEVARADDGMFLTQHK 1175
+A+L+YVDD +I I+ K YL Q F +K+LG +KYFLG+E+AR +G+F+ Q K
Sbjct: 1 MAVLIYVDDLVIAGNDTDTITNFKQYLKQCFHMKDLGPLKYFLGLELARGANGLFMCQRK 60
Query: 1176 FISEIIQDTGLQDAKIAHSPYIQGMKLGTDMGHPLPDPGSYRRLVGRLLYLSMTRPDISY 1235
+ +I+ + + D K + P Q KL D G DP YRRL+ RL+YL++ P+I+Y
Sbjct: 61 YTLDILDECKMLDCKPSTFPMEQNQKLVLDKGPTCSDPSRYRRLISRLIYLTIMHPEITY 120
Query: 1236 AVQQLSQFMQVPHHSHLKAALTVVKYLKGTSFTGLFLPAKNDLKLRAFSDADWASCSDSR 1295
+V L+ + V++YLK + G+ LP +NDL+L A+ D+DWASC +R
Sbjct: 121 SVHILT--------------MRVLRYLKSSPGQGIILPKENDLQLVAYCDSDWASCPLTR 166
Query: 1296 RSITGFCIFLGTSLISWKTKKQSTVSRSSAESEYRAMASTVCEIQWLTSLLTDFHIHIAR 1355
RS +G+ + LG++ ISWKTKKQSTVS+SS+E+EYRAM V E+ WL SLL+ +H
Sbjct: 167 RSTSGYLMKLGSAPISWKTKKQSTVSKSSSEAEYRAMGQAVSEVIWLRSLLSSLQVHYDS 226
Query: 1356 PIPLHCDNKAAIHIAANPVFHERTKHIDIDCHVVRSQLQAGLISTPHLPSNMQLADMFTK 1415
P L CDN+AA+H+AANPV+HERTKHI++DCH +R+ LQ G IST ++P+ Q AD+FTK
Sbjct: 227 PTVLLCDNQAAMHLAANPVYHERTKHIEVDCHFIRTHLQEGTISTSYVPTKKQQADIFTK 286
Query: 1416 SLPSHSYRTFVSKLGL 1431
+L + ++ KLG+
Sbjct: 287 ALGAKQFQELTFKLGV 302
>IMGA|Medtr8g044860.1 Zinc finger, C2H2-type; Polynucleotidyl
transferase, Ribonuclease H fold
chr08_pseudomolecule_IMGAG_V3 10143838-10146452 H
EGN_Mt090430 20090702
Length = 753
Score = 290 bits (741), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 216/779 (27%), Positives = 350/779 (44%), Gaps = 127/779 (16%)
Query: 32 AKKKLGFINGKIKPPSPESDDYDRWLTADSMVVSWLLNAISKDISNAFVFCKNAKALWDE 91
AK KL F++G I P + + W +S++ SW+LN+
Sbjct: 30 AKNKLSFVDGSILIPPLDDLNRSVWERCNSLIHSWILNS--------------------- 68
Query: 92 LKQRYGESNGPMIYQIEREIAGYKQGNTSVTDYYTNLKRRWDELSCLAPLPIC------- 144
L++R+ + + I + I KQG V +Y+T LK W+EL+ P+P+C
Sbjct: 69 LQERFSKVDRVRISSLCTTINNLKQGTKFVLEYFTELKSLWEELNSHCPMPMCTCPHPCR 128
Query: 145 CDSGTAIADYDNNRRLMQFLMGLGDEYDNVKNQILLQDPLPSLNKAFSMIISVEKQREVQ 204
C+S + ++ +++QFL GL D + VK Q+++Q+ S+NK +S++I E V
Sbjct: 129 CESMRSARNFRLEDQIIQFLTGLNDNFGVVKTQVVIQE---SINKIYSLVIQEESNNSVV 185
Query: 205 TDSTASSETAAVMLAQ--RNPTGTRGNARAGYTRNLSSARKEERKKQYCSKCKTTGHTID 262
T S++ ++ ++ A R P G RG +G + + +YCS C T HT++
Sbjct: 186 TASSSIEDSNILVNASDARKPFG-RGKLNSG-------SHPPKNNSKYCSFCHKTNHTLE 237
Query: 263 DCFLIHGYPDWFIELQRKKGVDVRKYYSANNVVRVASADDPLNLVVPQQKGMDSLNTGMP 322
C+ HG+P+ K + N V + Q G+
Sbjct: 238 FCYQKHGFPN------------ANKGSGSTNAVNSEGVPESQGSSAISQIGLTQEQYVHL 285
Query: 323 DYLLQEFQKFLTAKDSSSAHVEGDVRNVNFAGTLLNSVFTSINFNCKDNWIIDTGATDHI 382
LLQ+ + A +SA+ + ++AG +N++F + W+ID+GA +HI
Sbjct: 286 VSLLQQSSLIIPAPPITSANTNHIISEPSYAG--INTIFPCCLHVKSNYWLIDSGANEHI 343
Query: 383 TPHLSFYDHVIKLNPPTTIRLPDNSTRLVTHIGNIRLNARIVLYNVLYVPSFSCNLLSIS 442
LS H + P + LP+ ++ LV + G + + + N + C+ L
Sbjct: 344 CSSLSLL-HSFYIIKPLHVTLPNGTSVLVHYAGTVSFSPHFHITNKMIGLGDLCDGLCRL 402
Query: 443 LLTRTCGLSVHSFPEYCLFQDLLTSEVLARGTVIRDLYYLTKDSFSKQINCNSVARCSEH 502
+ + S +C + ++V CNSV+ +
Sbjct: 403 RIPASSNFS------HCFVNNFQCNKVSYES-------------------CNSVS--CNN 435
Query: 503 NTHL--ALLWHARLGHVSFKRLK---HVDGVAHCDYTELMCSVCPVAKQTRLSFPTSVIS 557
N H+ LWH RLGH+S +RL H+ H D + +C +C AKQ +L + +S
Sbjct: 436 NVHIPSTALWHFRLGHLSNQRLSQMHHLYPDIHVD-NKFICDICHFAKQRKLPYNSSTSI 494
Query: 558 SVHVFDLVHIDLWGPYKLKSITNAVYMLTIVDDYSRFCWTYMLKTKDQVLLALKSFFNYV 617
+ F+L+++D+WGP SI Y LTIVDD+SRF WT + K K +V ++ F +
Sbjct: 495 ASSNFELLYLDIWGPLAKVSIHGQRYFLTIVDDHSRFLWTILFKNKSEVPSHIQHFIYLI 554
Query: 618 LTHYDKRVKAIRTDNGTEFVNAACSTFLQDHGTLHQRTCVYTPQQNGVVERKHRTLLNIA 677
+ K IR+DNG F+ +A F G +HQR+CV TPQ N
Sbjct: 555 QNKHKVTPKIIRSDNGHVFLLSA---FYASQGIIHQRSCVETPQHN-------------- 597
Query: 678 RTLLFQSKFPSIFWSELLLAATHIANRLPSENLDWKTPYERLHGKQVNYSYFRTIGCLCY 737
+F + NR+P+ L+ K+PY+ L+ + + F+ GCLCY
Sbjct: 598 -----------VF----------LINRVPTLVLENKSPYQVLYKTLPDINSFKVFGCLCY 636
Query: 738 ATNTVPHKQKFDPRAFPCALLGYAQNQKAYKLYCLTTKSILVSRDVVFMENIFPFHQTN 796
A+ H+ K RA LGY K LY L TK I +SR+V F E+I P++ TN
Sbjct: 637 ASTLQSHRTKLQSRARKSVFLGYKSGYKGSFLYDLNTKEIFMSRNVTFHESILPYNSTN 695
>IMGA|Medtr5g103970.1 Polynucleotidyl transferase, Ribonuclease H fold
chr05_pseudomolecule_IMGAG_V3 41676281-41681462 E
EGN_Mt090430 20090702
Length = 479
Score = 289 bits (739), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 169/464 (36%), Positives = 234/464 (50%), Gaps = 22/464 (4%)
Query: 538 CSVCPVAKQTRLSFPTSVISSVHVFDLVHIDLWGPYKLKSITNAVYMLTIVDDYSRFCWT 597
C VC A+ +L F S + F L+H D+WGP + SI Y LTIVDD++RF W
Sbjct: 16 CDVCHFARHKKLPFSHSSSHASSKFQLLHFDIWGPLAINSIHGHKYFLTIVDDHTRFLWI 75
Query: 598 YMLKTKDQVLLALKSFFNYVLTHYDKRVKAIRTDNGTEFVNAACSTFLQDHGTLHQRTCV 657
+LKTK +V + +K+F + + K IRTDNG+EF+ F G LHQ +CV
Sbjct: 76 ILLKTKAEVPMHIKNFIVMIENQFHVTPKIIRTDNGSEFL---LHEFYASKGILHQSSCV 132
Query: 658 YTPQQNGVVERKHRTLLNIARTLLFQSKFPSIFWSELLLAATHIANRLPSENLDWKTPYE 717
TPQQNG VERKH+ +LNI R LL+QSK P FWS L A + NR+ + L +PY
Sbjct: 133 ETPQQNGRVERKHQHILNIGRALLYQSKLPLSFWSYAFLHAVFLINRITTPVLHNFSPYH 192
Query: 718 RLHGKQVNYSYFRTIGCLCYATNTVPHKQKFDPRAFPCALLGYAQNQKAYKLYCLTTKSI 777
L+ + + F+ GCLCYA++ H K + RA LGY K Y LY L T+ I
Sbjct: 193 LLYDSPPDITTFKVFGCLCYASSLQSHITKLETRARKSVFLGYKLGFKGYVLYDLHTREI 252
Query: 778 LVSRDVVFMENIFPFHQTNPTDVTTFVLPKCAVDTDPTFFESQITNTPQXXXXXXXXXXX 837
+SR VVF E + P+ + + + S I+++P
Sbjct: 253 FISRHVVFHECVLPYKSISSSQSLDWEYFTSISSPPIIPSVSDISHSPSTIESVPHTQPT 312
Query: 838 XXXXXXXXXXXXXXXXNLLVSPARNDGIPCEVDDAAISKNIVPLPEVRRSTRTXRPPAWL 897
+ +RN P + D I P +S+ + +
Sbjct: 313 TTTTPTNDPSPPPP----IRCSSRNKISPSYLKDY-----ICP----HKSSTS------V 353
Query: 898 NEYDTGTSSTSQINFTTSHMFFIAQLSKIKEPCNYNDAKQNMNWVNAMNNELASLEQNNT 957
N + ++ S N + H FI L EP Y +A + W AM EL +LE T
Sbjct: 354 NNLYSISNYVSYHNISNPHSHFILSLHAHNEPKTYTEANKFECWRQAMQVELTALENTGT 413
Query: 958 WILTDLPPNTKPVGCKWVYRIKYNADGSIDRYKARLVAKGYNQL 1001
W + D PPN KP+GC+W+Y+IK++ADG+I+RYKARLVAKGYNQL
Sbjct: 414 WKIIDSPPNAKPIGCRWIYKIKHHADGTIERYKARLVAKGYNQL 457
>IMGA|Medtr4g157500.1 polyprotein-like, putative
chr04_pseudomolecule_IMGAG_V3 39269652-39268814 H
EGN_Mt090430 20090702
Length = 260
Score = 258 bits (658), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 128/259 (49%), Positives = 172/259 (66%)
Query: 1106 LFTKGCGASFIALLVYVDDCLITSPSVTLISQLKTYLDQKFTIKNLGDVKYFLGIEVARA 1165
+FTK +SF LLVYVDD ++ S++ +K+ L F IK+LG +KY LG+EVA +
Sbjct: 1 MFTKHTDSSFTILLVYVDDIILAGNSLSEFQHIKSILHSSFKIKDLGQLKYVLGLEVAHS 60
Query: 1166 DDGMFLTQHKFISEIIQDTGLQDAKIAHSPYIQGMKLGTDMGHPLPDPGSYRRLVGRLLY 1225
G+ L Q K+ +++ D+G ++K + +KL D P D SYRRL+GRLLY
Sbjct: 61 KQGISLCQRKYCLDLLSDSGTINSKPVSTSSDASLKLHNDSSPPYEDIPSYRRLIGRLLY 120
Query: 1226 LSMTRPDISYAVQQLSQFMQVPHHSHLKAALTVVKYLKGTSFTGLFLPAKNDLKLRAFSD 1285
L+ TRPDI++ QQLSQF+ P +H AAL V+KYLK GLF P + L L+ FSD
Sbjct: 121 LNSTRPDITFITQQLSQFLSKPTQTHHNAALRVLKYLKCCPGKGLFFPRNSSLHLQGFSD 180
Query: 1286 ADWASCSDSRRSITGFCIFLGTSLISWKTKKQSTVSRSSAESEYRAMASTVCEIQWLTSL 1345
DWA C DSRRSI+G C F+G SLISW+TKKQ+TVSRSS+E+EYRA+AS CE+QW+ L
Sbjct: 181 VDWAGCVDSRRSISGQCFFIGNSLISWRTKKQTTVSRSSSEAEYRALASATCELQWILYL 240
Query: 1346 LTDFHIHIARPIPLHCDNK 1364
L D +I ++ L CDN+
Sbjct: 241 LKDLNIQSSKLPVLFCDNQ 259
>IMGA|Medtr7g025490.1 Reverse transcriptase, RNA-dependent DNA
polymerase chr07_pseudomolecule_IMGAG_V3 6252058-6249983
H EGN_Mt090430 20090702
Length = 509
Score = 249 bits (636), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 174/531 (32%), Positives = 240/531 (45%), Gaps = 137/531 (25%)
Query: 881 LPEVRRSTRTXRPPAWLNEYDTG----TSSTSQINFTTSHMFFIAQLSKIKEPCNYNDAK 936
L + R STRT PA L ++ ++S S + S+ F +S EP ++ A+
Sbjct: 101 LTQARHSTRTRTTPAHLQDFVCSALPISASLSYHPLSPSYCSFTLAISSDIEPSSFKQAQ 160
Query: 937 QNMNWVNAMNNELASLEQNNTWILTDLPPNTKPVGCKWVYRIKYNADGSIDRYKARLVAK 996
+ W AM+ EL++LE T W++
Sbjct: 161 SDPRWQLAMSPELSALEATGT----------------WIF-------------------- 184
Query: 997 GYNQLLGLDYLHTFSPVAKLVTVRVFLTIAVANSWSVQHLDINNAYLHGTIDEDIYMQIP 1056
+D SP+ + W + D NN +LHG + ED+YM P
Sbjct: 185 -------VDPPPNISPIG--------------SKWIFRLNDANNTFLHGDLQEDVYMHPP 223
Query: 1057 PGYDKAAEGQVCKLQRSLYGLKQAGRQWNKALTTSLLSQGFTQSSFDHCLFTKGCGASFI 1116
G GQVCKL +SLYGLKQA R+W + L + LL+ GF Q+S DH + SF
Sbjct: 224 QGVSPPRPGQVCKLLKSLYGLKQASRRWFEKLISLLLTIGFVQASADHSFLIRASPTSFT 283
Query: 1117 ALLVYVDDCLITSPSVTLISQLKTYLDQKFTIKNLGDVKYFLGIEVARADDGMFLTQHKF 1176
ALL+YV A + G+ L Q K+
Sbjct: 284 ALLIYV----------------------------------------AHSSKGISLCQRKY 303
Query: 1177 ISEIIQDTGLQDAKIAHSPYIQGMKLGTDMGHPLPDPGSYRRLVGRLLYLSMTRPDISYA 1236
+++ D GL K +P L D G P D +YR L+G LLYL+ TRPDIS+A
Sbjct: 304 CLDLLSDAGLTTCKSVSTPLDYACLLHIDDGPPFDDVLAYRCLIGCLLYLTTTRPDISFA 363
Query: 1237 VQQLSQFMQVPHHSHLKAALTVVKYLKGTSFTGLFLPAKNDLKLRAFSDADWASCSDSRR 1296
QQLSQFM P +H + AL V++YL+ GLF P ++++L FSDADW C DSRR
Sbjct: 364 TQQLSQFMAKPSVNHHRTALCVLRYLQVCPGRGLFFPRTSEMQLLGFSDADWGGCVDSRR 423
Query: 1297 S------ITGFCIFLGTSLISWKTKKQSTVSRSSAESEYRAMASTVCEIQWLTSLLTDFH 1350
S I F FL +S +S S MA H
Sbjct: 424 SLAFQEAIHRFLFFL-----------RSGISCFSISHPRTPMA----------------H 456
Query: 1351 IHIARPIPLHCDNKAAIHIAANPVFHERTKHIDIDCHVVRSQLQAGLISTP 1401
I ++ L+CDN++A+HIAANPVF+ERTKH+DIDCH+VR ++Q G + P
Sbjct: 457 IRLSI---LYCDNQSALHIAANPVFYERTKHLDIDCHIVREKVQRGSDAPP 504
>IMGA|Medtr1g013560.1 Polynucleotidyl transferase, Ribonuclease H
fold chr01_pseudomolecule_IMGAG_V3 2535883-2538036 H
EGN_Mt090430 20090702
Length = 680
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 148/503 (29%), Positives = 244/503 (48%), Gaps = 53/503 (10%)
Query: 1 PFRAPGFSLVNTPLTGQNYLSWSRSVQIALRAKKKLGFINGKIKPPSPESDDYDR--WLT 58
P P + G NY++WSR+V+ +L K KLGFING I P P+ DD +R W
Sbjct: 19 PSEGPNSLSITPKFNGSNYIAWSRTVERSLGTKNKLGFINGSI--PMPDEDDLNRTAWER 76
Query: 59 ADSMVVSWLLNAISKDISNAFVFCKNAKALWDELKQRYGESNGPMIYQIEREIAGYKQGN 118
+ +V SWL+N++S+ I+ VFC +A +W +LK+R+ + + I + I KQG+
Sbjct: 77 CNHLVQSWLINSVSESIAQTIVFCDSALEVWLDLKERFSKIDRIRIANLRSNINNLKQGS 136
Query: 119 TSVTDYYTNLKRRWDELSCLAPLPIC-------CDSGTAIADYDNNRRLMQFLMGLGDEY 171
V DY+T +K W+ELS P+P C C + + N ++MQFL GL D++
Sbjct: 137 KFVLDYFTEIKSLWEELSSHRPIPNCSCIHPCRCAASKVAKIHRNEDQIMQFLTGLNDQF 196
Query: 172 DNVKNQILLQDPLPSLNKAFSMIISVEKQREVQTDSTASSETAAVMLAQRNPTGTRGNAR 231
V+ Q+LL DPLPS+NK +S+++ E T + S++T+ + A N +G +
Sbjct: 197 SVVRTQVLLLDPLPSMNKVYSLVVQEESNHASITSLSVSTDTSIQINATEN-RKPQGRGK 255
Query: 232 AGYTRNLSSARKEERKKQYCSKCKTTGHTIDDCFLIHGYPDWFIELQRKKGVDVRKYYSA 291
+ Y+ + + C+ C T HT+D C+L HGYP +V K S+
Sbjct: 256 SFYS---------NKPTRLCTFCNRTNHTVDFCYLKHGYP------------NVNKPSSS 294
Query: 292 NNVVRVASADDPLNLVVPQ----------QKGMDSLNTGMPDYLLQEFQKFLTAKDSS-- 339
V AS +D N + G +LQ+ ++A S
Sbjct: 295 ---VNAASQEDSENGTISSSGLGTPASSPSAGFSQEQLAQLVSMLQQSNLVVSAPSPSQV 351
Query: 340 -SAHV-EGDVRNVNFAGTLLNSVFTSINFNCKDNWIIDTGATDHITPHLSFYDHVIKLNP 397
S H+ + + + +L SV +S+ + W+ID+GA +HI ++ + ++
Sbjct: 352 TSNHIASASISTPDSSKGILASV-SSLT-SKPPFWLIDSGANEHICCDIASFSSFYRIK- 408
Query: 398 PTTIRLPDNSTRLVTHIGNIRLNARIVLYNVLYVPSFSCNLLSISLLTRTCGLSVHSFPE 457
P + LP+ ++ L GN+ N++ L +VLY P F+ NL+S++ + H E
Sbjct: 409 PVYVSLPNGNSVLAHFAGNVFFNSKFHLSHVLYSPHFTLNLISVAKCCDSLTCFFHFSLE 468
Query: 458 YCLFQDLLTSEVLARGTVIRDLY 480
CL QD + +++ LY
Sbjct: 469 KCLIQDQQSLKMIGLAKQQDGLY 491
Score = 152 bits (384), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 130/241 (53%), Gaps = 7/241 (2%)
Query: 491 INCNSVARCSEHNTHLALLWHARLGHVSFKRLKHVDGVAHCDYTELMCSVCPVAKQTRLS 550
+N SVA+C + L +H L + + + + + + P K +
Sbjct: 447 LNLISVAKCCDS---LTCFFHFSLEKCLIQDQQSLKMIGLAKQQDGLYKFYPSCKSSNFE 503
Query: 551 FPTSVISSVHVFDLVHIDLWGPYKLKSITNAVYMLTIVDDYSRFCWTYMLKTKDQVLLAL 610
F SS +V + + +WGP + S+ Y LTI+DD++RF W +LKTK +V +
Sbjct: 504 FSALSPSSCNVVSISNY-IWGPLSVASVHGHRYFLTILDDHTRFLWVILLKTKAEVSSHV 562
Query: 611 KSFFNYVLTHYDKRVKAIRTDNGTEFVNAACSTFLQDHGTLHQRTCVYTPQQNGVVERKH 670
K+F + H+ K IRTDNG EF+ +F HG +HQ++CV TPQQNG VERKH
Sbjct: 563 KNFITMIQNHFHTTPKFIRTDNGPEFM---LPSFYASHGIIHQKSCVETPQQNGRVERKH 619
Query: 671 RTLLNIARTLLFQSKFPSIFWSELLLAATHIANRLPSENLDWKTPYERLHGKQVNYSYFR 730
+ +LN+ R LL+QSK P FWS + A + NR+P+ L ++PY LH K + + F+
Sbjct: 620 QHILNVGRALLYQSKLPPSFWSYAIHHAVFLINRVPTPLLHNQSPYFLLHHKLPDIALFK 679
Query: 731 T 731
+
Sbjct: 680 S 680
>IMGA|Medtr7g045780.1 Retrotransposon gag protein
chr07_pseudomolecule_IMGAG_V3 11034924-11036399 H
EGN_Mt090430 20090702
Length = 491
Score = 203 bits (516), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 141/475 (29%), Positives = 230/475 (48%), Gaps = 41/475 (8%)
Query: 29 ALRAKKKLGFINGKIKPPSPESDDYDR--WLTADSMVVSWLLNAISKDISNAFVFCKNAK 86
AL AK KL FING I+ PE+ D +R W + ++ SW++N++S+ I+ VF A
Sbjct: 4 ALGAKNKLAFINGIIQ--QPEALDLNRAAWERCNHLIHSWIINSVSESIAQNIVFHDYAL 61
Query: 87 ALWDELKQRYGESNGPMIYQIEREIAGYKQGNTSVTDYYTNLKRRWDELSCLAPLP---- 142
+W++LK+R+ +++ I + I KQG +V++Y+T ++ W+EL+ PLP
Sbjct: 62 DVWEDLKERFSKADRIRISTLCSSINNLKQGGKTVSEYFTEMRSLWEELNSHRPLPNCSC 121
Query: 143 ---ICCDSGTAIADYDNNRRLMQFLMGLGDEYDNVKNQILLQDPLPSLNKAFSMIISVEK 199
CC++ T Y ++MQFL+GL D++ VK QILL DPLPSLNK +S++I E
Sbjct: 122 IHRCCCEASTRAHVYRVEDQIMQFLIGLNDQFSIVKTQILLMDPLPSLNKVYSLVIQEES 181
Query: 200 QREVQTDSTASSETAAVMLAQRNPTGTRGNARAGYTRNLSSARKEERKKQYCSKCKTTGH 259
A V +A + RG GY N ++ ++C+ C T H
Sbjct: 182 NHAPILSLPADESNILVNVADSKKSYGRG---KGYYSN------QKNSSRHCTFCNRTNH 232
Query: 260 TIDDCFLIHGYPDWFIELQRKKGVDVRKYYSANNVVRVASADDPLNLVVPQQKGMD---S 316
TID C+L HG+P+ I G + N V V S N+ + D S
Sbjct: 233 TIDTCYLKHGFPNANI-----PGNSTASTQGSTNSVTVESG----NVSNTEHGNGDSGFS 283
Query: 317 LNTGMPDYLLQEFQK--FLTAKDSSSAHVEGDVRN------VNFAGTLLNSVFTSINFNC 368
++ ++L+ Q+ L++ S S + V + + ++ S + N
Sbjct: 284 ISQDRYEHLVNLLQQATLLSSAVSPSVSTSNQLTTSPSMPIVPYQSGIQSAFSCSFHINS 343
Query: 369 KDNWIIDTGATDHITPHLSFYDHVIKLNPPTTIRLPDNSTRLVTHIGNIRLNARIVLYNV 428
WIID+GA DH+ S + K+ P + LP+ ++ V + GN+ + L NV
Sbjct: 344 LPIWIIDSGANDHVCFSKSHFTAFYKIK-PVLVTLPNGNSIYVHYAGNVYFTPHLYLNNV 402
Query: 429 LYVPSFSCNLLSISLLTRTCGLSVHSFPEYCLFQDLLTSEVLARGTVIRDLYYLT 483
LY F NL+S+S + + S + C+ QD+ + +++ G LY L+
Sbjct: 403 LYSLEFKVNLISVSKMCDSLSCSGNFVSNKCVIQDVTSHKMIGLGDKSNGLYTLS 457
>IMGA|Medtr3g058930.1 Polynucleotidyl transferase, Ribonuclease H fold
chr03_pseudomolecule_IMGAG_V3 13084099-13087565 H
EGN_Mt090430 20090702
Length = 563
Score = 183 bits (464), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 136/453 (30%), Positives = 199/453 (43%), Gaps = 107/453 (23%)
Query: 948 ELASLEQNNTWILTDLPPNTKPVGCKWVYRIKYNADGSIDRYKARLVAKGYNQLLGLDYL 1007
+L S +N TW L L K + KWV+++K N +G I ++KARLVA
Sbjct: 203 KLKSSGKNQTWELIKLTDGKKAIDVKWVFKLKLNPEGKIVKHKARLVA------------ 250
Query: 1008 HTFSPVAKLVTVRVFLTIAVANSWSVQHLDINNAYLHGTIDEDIYMQIPPGYDKAAEGQV 1067
RVFL G+D V
Sbjct: 251 ------------RVFLK-------------------------------KEGFDYTE--VV 265
Query: 1068 CKLQRSLYGLKQAGRQWNKALTTSLLSQGFTQSSFDHCLFTKGCGASFIALLVYVDDCLI 1127
KL ++LYGLKQA R WNK + + QGF + +H ++ KG + + ++ CL
Sbjct: 266 FKLNKALYGLKQAPRAWNKRIEKFFVEQGFKKCLAEHGVYVKGSEGTSLLII-----CL- 319
Query: 1128 TSPSVTLISQLKTYLDQKFTIKNLGDVKYFLGIEVARADDGMFLTQHKFISEIIQDTGLQ 1187
E+ R G+ L Q K+ +EI + +
Sbjct: 320 ---------------------------------EILRTTKGLILNQTKYDTEIQKKFNML 346
Query: 1188 D----AKIAHSPYIQGMKLGTDMGHPLPDPGSYRRLVGRLLYLSMTRPDISYAVQQLSQF 1243
D +A++ I +K D G DP RRL+G L YL +R DISY+V +S+F
Sbjct: 347 DFNSSITLAYANNINEVK-EEDKG---VDPTILRRLIGLLRYLCQSRLDISYSVGIVSKF 402
Query: 1244 MQVPHHSHLKAALTVVKYLKGTSFTGLFLPAKND---LKLRAFSDADWASCSDSRRSITG 1300
M P +H AA +++Y+ GT G+ P + L + +SDADW RR T
Sbjct: 403 MSNPLKTHFLAAKKIIRYIHGTLQYGILFPEAQETEQLSMIDYSDADWCRDKRDRRRTTS 462
Query: 1301 FCIFLGTSLISWKTKKQSTVSRSSAESEYRAMASTVCEIQWLTSLLTDFHIHIARPIPLH 1360
F L + ISW +KKQ V+ SS E EY +S C+ WL ++L I + +PI L
Sbjct: 463 FLFMLQGAPISWSSKKQPIVALSSCEVEYVVGSSAACQANWLQNVLEQSMIKLKQPIKLL 522
Query: 1361 CDNKAAIHIAANPVFHERTKHIDIDCHVVRSQL 1393
DNK AI++A N + H ++KHI+ H +R Q+
Sbjct: 523 IDNKYAINLAKNHISHGKSKHIETKFHYLRDQV 555
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
Query: 676 IARTLLFQSKFPSIFWSELLLAATHIANRLPSENLDWKTPYERLHGKQVNYSYFRTIGCL 735
+ R++L + K P FW + AT+I NR P++ + K P E ++ + S + G +
Sbjct: 1 MVRSMLKEKKIPHEFWGAAVNTATYILNRCPTKKMKDKVPEEIWSRRKPSISNLKVFGSI 60
Query: 736 CYATNTVPHKQKFDPRAFPCALLGYAQNQKAYKLYCLTTKSILVSRDVVFMENIF 790
Y ++K + + L+GY N AY+L L +K I ++RDV +E +
Sbjct: 61 FYKHVPDSRRKKLEDKTEAMILVGY-HNTGAYRLLDLHSKKISITRDVKVLEEEY 114
>IMGA|Medtr7g123950.1 Retrotransposon gag protein
chr07_pseudomolecule_IMGAG_V3 29015812-29013196 E
EGN_Mt090430 20090702
Length = 302
Score = 175 bits (443), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/221 (39%), Positives = 129/221 (58%), Gaps = 2/221 (0%)
Query: 5 PGFSLVNTPLTGQNYLSWSRSVQIALRAKKKLGFINGKIKPPSPESDDYDRWLTADSMVV 64
PG SLVN PL G NY WSRS+ ++L AK KLG I+G +K PS + W + +V+
Sbjct: 43 PGISLVNQPLNGGNYGEWSRSMLLSLSAKNKLGLIDGTVKAPSADDPKLPLWKRCNDLVL 102
Query: 65 SWLLNAISKDISNAFVFCKNAKALWDELKQRYGESNGPMIYQIEREIAGYKQGNTSVTDY 124
+W+L++I DI+ + +F A A+W +L R+ + + IYQI +EI+ +QG+ ++DY
Sbjct: 103 TWILHSIEPDIARSVIFSDTAAAVWSDLHDRFSQGDESRIYQIRQEISECRQGSLLISDY 162
Query: 125 YTNLKRRWDEL-SCLAPLPICCDSGTAIADYDNNRRLMQFLMGLGDEYDNVKNQILLQDP 183
YT LK WDEL S P+ CD +A + ++MQFLMGL + Y V+ IL+ +P
Sbjct: 163 YTKLKSLWDELGSYQEPITCSCDMLKKVAVREEKEKVMQFLMGLNESYSQVRGSILMMNP 222
Query: 184 LPSLNKAFSMIISVEKQREVQTDSTASSETAAVMLAQRNPT 224
LP K +I+ E+Q EV + A+ +A R PT
Sbjct: 223 LPDTRKVHGLILQQERQMEVVIRRETPPISHAMQIA-RTPT 262
>IMGA|Medtr8g044880.1 polyprotein-like, putative
chr08_pseudomolecule_IMGAG_V3 10147539-10149356 H
EGN_Mt090430 20090702
Length = 196
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/183 (46%), Positives = 118/183 (64%), Gaps = 17/183 (9%)
Query: 1256 LTVVKYLKGTSFTGLFLPAKNDLKLRAFSDADWA-SCSDSRRSITGFCIFLGTSLISWKT 1314
+ V+ YLKG GLF P ++ L+++ +++ADWA C D+RRSI+ C F W
Sbjct: 1 MRVLSYLKGCPGKGLFFPRQSSLQIQGYTNADWAVGCKDTRRSISEQCFF------CW-- 52
Query: 1315 KKQSTVSRSSAESEYRAMASTVCEIQWLTSLLTDFHIHIARPIPLHCDNKAAIHIAANPV 1374
SS+E+EYRA+AS CE+Q LT LL D ++ +P L+CDN++AI+IAANPV
Sbjct: 53 --------SSSEAEYRALASATCELQRLTYLLRDLKVNCIKPPVLYCDNQSAIYIAANPV 104
Query: 1375 FHERTKHIDIDCHVVRSQLQAGLISTPHLPSNMQLADMFTKSLPSHSYRTFVSKLGLVDF 1434
FHE TKH++IDCH+VR +LQAGL + S Q+AD FTKSL + +SKLG++D
Sbjct: 105 FHECTKHLEIDCHIVREKLQAGLFKLLPISSKDQVADFFTKSLLPQPFNPLLSKLGMLDI 164
Query: 1435 SPP 1437
P
Sbjct: 165 YHP 167
>IMGA|Medtr5g086570.1 Ty1/copia-element polyprotein, related
chr05_pseudomolecule_IMGAG_V3 33221869-33220686 H
EGN_Mt090430 20090702
Length = 369
Score = 159 bits (401), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/270 (35%), Positives = 143/270 (52%), Gaps = 19/270 (7%)
Query: 5 PGFSLVNTPLTGQNYLSWSRSVQIALRAKKKLGFINGKIKPPSPESDDYDRWLTADSMVV 64
PG LV L G+NY +WSRS++ AL+AK KLGFI+G I P ++ +Y W ADSMV
Sbjct: 51 PGTPLVAAVLNGENYRTWSRSMKTALQAKLKLGFIDGTITKPGMKTTNYVNWERADSMVT 110
Query: 65 SWLLNAISKDISNAFVFCKNAKALWDELKQRYGESNGPMIYQIEREIAGYKQGNT-SVTD 123
+W++NA + ++ A+ +W +L++R+ ++N P I+Q+ R + ++ + SVT
Sbjct: 111 AWIINATDPVLHSSISHASTARDIWLDLEERFAQTNTPRIHQLWRNLCLMQEDDELSVTA 170
Query: 124 YYTNLKRRWDELSCLAPLPIC-CDSGTAIADYDNNRRLMQFLMGLGDE-YDNVKNQILLQ 181
+YT K DELS L PLP C C + + + +RL FL L +E Y +VK IL
Sbjct: 171 FYTQFKSLLDELSELQPLPECTCGASKELMRMEEEQRLHLFLGSLDNEKYGHVKTSILNV 230
Query: 182 DPLPSLNKAFSMIISVEKQREVQTDSTASSETAAVMLAQRNPTGTRGNARAGYTRNLSSA 241
+PLPSL +AF+ ++ E V+ + + N G A Y+ N
Sbjct: 231 EPLPSLRRAFNHVLREEAHFPVEKE-------------KGNNKMDPGTAFHSYSEN---K 274
Query: 242 RKEERKKQYCSKCKTTGHTIDDCFLIHGYP 271
+K + K C C GH CF I GYP
Sbjct: 275 QKRDGPKPKCDHCGKVGHPKSKCFEIIGYP 304
>IMGA|Medtr6g069740.1 Zinc finger, C4-type
chr06_pseudomolecule_IMGAG_V3 12973766-12974997 H
EGN_Mt090430 20090702
Length = 366
Score = 155 bits (391), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 185/402 (46%), Gaps = 76/402 (18%)
Query: 3 RAPGFSLVNTPLTGQNYLSWSRSVQIALRAKKKLGFINGKIKPPSPESDDYDR--WLTAD 60
P F +V PL G NY++WSRS+ AK KL FI+G ++ P+ DD +R W +
Sbjct: 19 EGPNFVVVAPPLDGSNYIAWSRSMIRDFGAKNKLKFIDGSME--IPDEDDLNRNAWERCN 76
Query: 61 SMVVSWLLNAISKDISNAFVFCKNAKALWDELKQRYGESNGPMIYQIEREIAGYKQGNTS 120
++ SW++N+IS I+ VF +NA W +LK+R+ + +
Sbjct: 77 HLIQSWIINSISLQIAQTLVFHENATDAWSDLKERFAK--------------------VT 116
Query: 121 VTDYYTNLKRRWDELSCLAPLPIC-------CDSGTAIADYDNNRRLMQFLMGLGDEYDN 173
V +Y+T +K W+EL+ P+P C C + ++ +++QFL GL D+++
Sbjct: 117 VLEYFTEIKTLWEELNSHRPMPHCTCPHPCRCAAMREARNFRLEDQVIQFLTGLNDQFNV 176
Query: 174 VKNQILLQDPLPSLNKAFSMIISVEKQREVQTDSTASSETAAVMLAQRNPTGTRGNARAG 233
VK Q+L+ DPLPS+NK +S+++ E + + + ++ R P G RG G
Sbjct: 177 VKTQVLMLDPLPSINKVYSLVVQEESNNQSLSSPIDEPLSIVNVVESRKPQG-RGR---G 232
Query: 234 YTRNLSSARKEERKKQYCSKCKTTGHTIDDCFLIHGYPDWFIELQRKKGVDVRKYYSANN 293
Y+ + R +CS C + HT++ + HG+P+ + ++
Sbjct: 233 YSHSFKPPR-------HCSFCGKSNHTVEFFYQKHGHPN---------------FQKQSS 270
Query: 294 VVRVASADDPLNLVVPQQKGMDSLNTGMPDYLLQEFQKFLTAKDSSSAHVEGDVRNVNFA 353
V V+S +D L S+ P F L SSS +F
Sbjct: 271 YVNVSSRNDELETQSGSSSEASSILASSP------FSANLIHAPSSSN---------SFN 315
Query: 354 GTLLNSVFTSINFNCKDNWIIDTGATDHITPHLSFYDHVIKL 395
+ ++S+F+ + D W++D+GA +HI L H+ K
Sbjct: 316 TSGISSIFSCSLQSKSDLWLLDSGANEHIVSSL----HITKF 353
>IMGA|Medtr3g019580.1 Retrotransposon gag protein
chr03_pseudomolecule_IMGAG_V3 4112343-4111299 H
EGN_Mt090430 20090702
Length = 334
Score = 152 bits (383), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 145/261 (55%), Gaps = 25/261 (9%)
Query: 29 ALRAKKKLGFINGKIKPPSPESDDYDRWLTADSMVVSWLLNAISKDISNAFVFCKNAKAL 88
AL K K F++G I+ P + W +++V +W++N+IS I+ + VF +NA +
Sbjct: 6 ALAMKNKFKFVDGSIEVPDEHDLNRAAWERCNNLVHTWIINSISPSIAQSVVFIENAMDM 65
Query: 89 WDELKQRYGESNGPMIYQIEREIAGYKQGNTSVTDYYTNLKRRWDELS-------CLAPL 141
W++LK R+ + + Q+++EI+ KQG+ VT+Y+T L+ W+EL C P+
Sbjct: 66 WNDLKDRFMRGDRIRVAQLQQEISNLKQGSKKVTEYFTELRGLWEELDQYRPMPHCTCPI 125
Query: 142 PICCDSGTAIADYDNNRRLMQFLMGLGDEYDNVKNQILLQDPLPSLNKAFSMIISVEKQR 201
P C + + R++QFL+GL +EY +V +Q+LL DPLP +N+ FSMI+ E++
Sbjct: 126 PCSCLAMRNAKGFRLEDRIIQFLIGLNEEYQSVTSQVLLMDPLPQINRVFSMIMQQERKA 185
Query: 202 E---VQTDSTASSETAAVML----AQRNPTGTRGNARAGYT-RNLSSARKEERKKQYCSK 253
+ + ++ +T+A ++ AQR RGN AG+ R + R C+
Sbjct: 186 QYGIIVAPASVVEDTSARLVNAVDAQRQFGRGRGN--AGFQGRGRGNGR-------VCNF 236
Query: 254 CKTTGHTIDDCFLIHGY-PDW 273
C + HT++ C+ HG+ P+W
Sbjct: 237 CGRSNHTMETCYKKHGFPPNW 257
>IMGA|Medtr7g126870.1 hypothetical protein
chr07_pseudomolecule_IMGAG_V3 29583401-29584363 H
EGN_Mt090430 20090702
Length = 302
Score = 151 bits (382), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/243 (36%), Positives = 135/243 (55%), Gaps = 28/243 (11%)
Query: 1 PFRAPGFSLVNTPLTGQNYLSWSRSVQIALRAKKKLGFINGKIKPPSPESDDYDR--WLT 58
P P LV L+G NY SWSRS+Q+ALR+K KL FING + P P DD+D W
Sbjct: 34 PNENPDAVLVTPLLSGNNYHSWSRSMQVALRSKHKLHFINGTL--PRPCDDDHDSIAWDR 91
Query: 59 ADSMVVSWLLNAISKDISNAFVFCKNAKALWDELKQRYGESNGPMIYQIEREIAGYKQGN 118
SM++SWL N + +IS + ++ A +W+ELK+R + QG
Sbjct: 92 CKSMIMSWLSNYVDPEISQSILWMDTALEIWNELKER------------------FYQGE 133
Query: 119 TSVTDYYTNLKRRWDELSCLAPLPI--CCDSGTAIA---DYDNNRRLMQFLMGLGDEYDN 173
+S++ YYT +K+ W EL P+P C D AIA +Y ++ ++++FL GL +++
Sbjct: 134 SSISSYYTKMKKLWQELDNFRPIPTSNCVDDCKAIAKMREYKDSDQVIRFLRGLNEQFLA 193
Query: 174 VKNQILLQDPLPSLNKAFSMIISVEKQREVQTDSTASSETAAVMLAQRNPTGTRGNARAG 233
V++QI+L DPLPS+ K +S+++ E+Q V D + + + + NP+ RGN A
Sbjct: 194 VRSQIMLMDPLPSIGKVYSLLVQQERQVVVPLDESKLLDVSNNSFSG-NPSYGRGNMHAS 252
Query: 234 YTR 236
R
Sbjct: 253 RGR 255
>IMGA|Medtr5g093020.1 Polynucleotidyl transferase, Ribonuclease H
fold, related chr05_pseudomolecule_IMGAG_V3
36507044-36505941 H EGN_Mt090430 20090702
Length = 367
Score = 150 bits (379), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 117/201 (58%), Gaps = 7/201 (3%)
Query: 1 PFRAPGFSLVNTPLTGQNYLSWSRSVQIALRAKKKLGFINGKIKPPSPESDDYDRWLTAD 60
P PG LV+TPLT NY +WSR+++ AL +K K+ FING + PS YD W D
Sbjct: 35 PSENPGAVLVSTPLTDHNYHNWSRAMKRALSSKNKIRFINGTLPKPSYLDSTYDLWDRCD 94
Query: 61 SMVVSWLLNAISKDISNAFVFCKNAKALWDELKQRYGESNGPMIYQIEREIAGYKQGNTS 120
+MV+SW+ +S I + + ++A LW +L+ R+ + N + + R++ +QG+ S
Sbjct: 95 NMVLSWITRTLSPHIFQSTICIESAFELWKDLEDRFSKGNFFRVSDLLRDLHSTQQGDRS 154
Query: 121 VTDYYTNLKRRWDELSCLAPLPIC-------CDSGTAIADYDNNRRLMQFLMGLGDEYDN 173
++ Y+TN+K WDEL L P P C C ++ +Y N ++ FL GL Y N
Sbjct: 155 LSKYFTNMKILWDELEDLRPTPSCSYVNPCTCSLSNSVRNYKNMEYIICFLKGLNTIYSN 214
Query: 174 VKNQILLQDPLPSLNKAFSMI 194
V+ Q LL DPLPS++K +S++
Sbjct: 215 VRTQNLLMDPLPSISKVYSLV 235
Score = 138 bits (348), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/120 (55%), Positives = 87/120 (72%)
Query: 1318 STVSRSSAESEYRAMASTVCEIQWLTSLLTDFHIHIARPIPLHCDNKAAIHIAANPVFHE 1377
+TVS+SS+E+EYRAMA+TVCEIQWLT LL DF++ P L+CD+++A HIAAN FHE
Sbjct: 247 TTVSKSSSEAEYRAMATTVCEIQWLTYLLQDFNLQFHTPALLYCDSQSARHIAANTSFHE 306
Query: 1378 RTKHIDIDCHVVRSQLQAGLISTPHLPSNMQLADMFTKSLPSHSYRTFVSKLGLVDFSPP 1437
RTKHI++DCH+VR +LQ L + S+ QLAD+ TK L + F+SKLGL D P
Sbjct: 307 RTKHIELDCHIVREKLQQKLFHLLPVSSSQQLADVLTKPLDPLPFSNFISKLGLKDIYTP 366
>IMGA|Medtr6g069750.1 Reverse transcriptase, putative
chr06_pseudomolecule_IMGAG_V3 12976555-12977103 H
EGN_Mt090430 20090702
Length = 149
Score = 140 bits (352), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 67/142 (47%), Positives = 83/142 (58%), Gaps = 28/142 (19%)
Query: 945 MNNELASLEQNNTWILTDLPPNTKPVGCKWVYRIKYNADGSIDRYKARLVAKGYNQLLGL 1004
M E+ +LE TW L DLPPN KP+GC+W+Y+IK+ ADGSI RYKARLV KGYNQ+ G
Sbjct: 1 MQAEITALENTGTWKLVDLPPNVKPIGCRWIYKIKHYADGSIQRYKARLVVKGYNQVEGW 60
Query: 1005 DYLHTFSPVAKL----------------------------VTVRVFLTIAVANSWSVQHL 1036
DY T+SPVAKL TVR + +A N W + L
Sbjct: 61 DYFDTYSPVAKLTTARLVVKGYNQVEGWDYFDTYSLVAKMTTVRTVIALASINQWHIHKL 120
Query: 1037 DINNAYLHGTIDEDIYMQIPPG 1058
D N+A+LHG + ED+YM IP G
Sbjct: 121 DANSAFLHGDLQEDVYMLIPQG 142
>IMGA|Medtr5g086720.1 4D11_12, related chr05_pseudomolecule_IMGAG_V3
33350941-33351963 H EGN_Mt090430 20090702
Length = 326
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 134/271 (49%), Gaps = 35/271 (12%)
Query: 5 PGFSLVNTPLTGQNYLSWSRSVQIALRAKKKLGFINGKIKPPSPESDDYDRWLTADSMVV 64
PG LV L G+NY +WSRS++ ALRAK KLGFI+G I P ++ +Y W ADSMV
Sbjct: 43 PGTPLVAAVLNGENYRTWSRSMKTALRAKLKLGFIDGTITKPGMKTTNYVNWERADSMVT 102
Query: 65 SWLLNAISKDISNAFVFCKNAKALWDELKQRYGESNGPMIYQIEREIAGYKQGNTSVTDY 124
+W++NA + ++ + +W +L++R+ ++N P I+Q+ R +
Sbjct: 103 AWIINATDPVLHSSISHASTTRDIWLDLEERFAQTNAPRIHQLWRNLC------------ 150
Query: 125 YTNLKRRWDELSC--LAPLPIC-CDSGTAIADYDNNRRLMQFLMGLGDE-YDNVKNQILL 180
L ++ DELS L PLP C C + + + + L FL L +E Y +VK IL
Sbjct: 151 ---LMQKDDELSLSELQPLPECTCGASKELMRREEEQCLHLFLGSLDNEKYGHVKTSILN 207
Query: 181 QDPLPSLNKAFSMIISVEKQREVQTDSTASSETAAVMLAQRNPTGTRGNARAGYTRNLSS 240
+PLPSL +AF+ ++ E + V+ + + N G A Y+ N
Sbjct: 208 VEPLPSLRRAFNHVLREEARFTVEKE-------------KGNNKMDPGTAFHSYSGN--- 251
Query: 241 ARKEERKKQYCSKCKTTGHTIDDCFLIHGYP 271
+ + K C C GH CF I GYP
Sbjct: 252 KQNRDGPKPKCDHCGKVGHPKSKCFEIIGYP 282
>IMGA|Medtr3g110550.1 Reverse transcriptase, RNA-dependent DNA
polymerase chr03_pseudomolecule_IMGAG_V3
27872933-27871392 E EGN_Mt090430 20090702
Length = 256
Score = 133 bits (335), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 126/230 (54%), Gaps = 28/230 (12%)
Query: 1118 LLVYVDDCLITSPSVTLISQLKTYLDQKFTIKNLGDVKYFLGIEVARADDG-MFLTQHKF 1176
++VYV D ++T + L+ QL ++L+ F++K+LG +KYFLGIEV +G + +TQ K+
Sbjct: 1 MIVYVGDMIVTGNNTPLLQQLVSHLNSAFSLKDLGALKYFLGIEVKPQSNGSLLITQSKY 60
Query: 1177 ISEIIQDTGLQDAKIAHSPYIQGMKLGTDMGHPLPDPGSYRRLVGRLLYLSMTRPDISYA 1236
+ +++ T +Q+AK SP I +KL D P DP R +V L Y ++ P
Sbjct: 61 VRDLLAKTDMQEAKSLPSPMISDLKLSKDGSTPFSDPTLCRSIVRALQYANLIGP----- 115
Query: 1237 VQQLSQFMQVPHHSHLKAALTVVKYLKGTSFTGLFL-PAKN-DLKLRAFSDADWASCSDS 1294
LS V+++LKGT GL + P L + A+ DADW S D
Sbjct: 116 ---LSN---------------VLRHLKGTLSWGLLVRPIPTYPLSILAYCDADWGSDPDD 157
Query: 1295 RRSITGFCIFLGTSLISWKTKKQSTVSRSSAESEYRAMASTVCEIQWLTS 1344
R C+FLG +LISW KKQ+ ++RSS E+EY ++A E+ W+ +
Sbjct: 158 RS--VDACVFLGPNLISWWAKKQAVIARSSTEAEYSSLALAKSELLWIKT 205
>IMGA|Medtr5g086750.1 Reverse transcriptase, RNA-dependent DNA
polymerase chr05_pseudomolecule_IMGAG_V3
33354025-33354392 H EGN_Mt090430 20090702
Length = 108
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 69/105 (65%)
Query: 1067 VCKLQRSLYGLKQAGRQWNKALTTSLLSQGFTQSSFDHCLFTKGCGASFIALLVYVDDCL 1126
V L++SLYGLKQA R W L+ +L+ GF +S DH LFT + F+A+L+YVDD +
Sbjct: 2 VYWLRKSLYGLKQASRNWYSKLSQALIEYGFQESHADHSLFTYSRESIFMAVLIYVDDLV 61
Query: 1127 ITSPSVTLISQLKTYLDQKFTIKNLGDVKYFLGIEVARADDGMFL 1171
I I+ K YL Q F +K+LG +KYFLG+E+AR +G+F+
Sbjct: 62 IAGNDTDTITNFKQYLKQCFHMKDLGPLKYFLGLELARGANGLFM 106
>IMGA|Medtr8g005190.1 Integrase, catalytic region, related
chr08_pseudomolecule_IMGAG_V3 117969-116692 E
EGN_Mt090430 20090702
Length = 237
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 78/154 (50%), Gaps = 15/154 (9%)
Query: 128 LKRRWDEL-------SCLAPLPICCDSGTAIADYDNNRRLMQFLMGLGDEYDNVKNQILL 180
+K WDEL SC+ +P C T++ Y NN ++ FL GL D Y NV+ QILL
Sbjct: 1 MKIIWDELEDLRPTPSCVCAIPCSCKLSTSVRTYKNNEYILCFLKGLNDNYTNVRTQILL 60
Query: 181 QDPLPSLNKAFSMIISVEKQREVQTDSTASSETAAVMLAQRNPTGTRGNARAGYTRNLSS 240
DPLPS++K +S++I +Q T+ + S V + + +GN G R
Sbjct: 61 MDPLPSISKTYSLVI---QQDSTPTEQPSESNVFNVNSSSTSSAQHKGNHGLGRGRG--- 114
Query: 241 ARKEERKKQYCSKCKTTGHTIDDCFLIHGYPDWF 274
K + CS C T HT+++C+ HG+P +
Sbjct: 115 --KGPKTSMLCSNCNKTNHTVENCYFKHGFPPGY 146
>IMGA|Medtr3g080970.1 Retrotransposon gag protein
chr03_pseudomolecule_IMGAG_V3 19236298-19236945 H
EGN_Mt090430 20090702
Length = 200
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 95/193 (49%), Gaps = 22/193 (11%)
Query: 1 PFRAPGFSLVNTPLTGQNYLSWSRSVQIALRAKKKLGFINGKIKPPSPESDDYDRWLTAD 60
P +V PL G NYL W RS+ A K K+ FI+ ++ P+ + + + +
Sbjct: 17 PSEGSNSVIVAPPLDGSNYLGWRRSMVRAFGMKNKMKFIDVSMEIPNEKDLNPNVRERCN 76
Query: 61 SMVVSWLLNAISKDISNAFVFCKNAKALWDELKQRYGESNGPMIYQIEREIAGYKQGNTS 120
++ SW++N++S I+ F K D ++ I + +I KQG+
Sbjct: 77 HLIQSWIINSVSTQIAQTLRFSK-----IDRIR----------IATLRSKINNVKQGSKY 121
Query: 121 VTDYYTNLKRRWDELSCLAPLPIC-------CDSGTAIADYDNNRRLMQFLMGLGDEYDN 173
V DY+T +K W+EL+ P+P C C + ++ +++QFL GL D+++
Sbjct: 122 VLDYFTEMKTLWEELNSHHPMPHCTCPHPCRCTAMRETRNFILEDQVIQFLTGLNDQFNV 181
Query: 174 VKNQILLQDPLPS 186
V Q+L+ DPLPS
Sbjct: 182 VNTQVLMLDPLPS 194
>IMGA|Medtr3g068700.1 Polynucleotidyl transferase, Ribonuclease H
fold, putative chr03_pseudomolecule_IMGAG_V3
16240238-16240810 H EGN_Mt090430 20090702
Length = 147
Score = 88.2 bits (217), Expect = 2e-17, Method: Composition-based stats.
Identities = 40/106 (37%), Positives = 66/106 (62%), Gaps = 7/106 (6%)
Query: 104 IYQIEREIAGYKQGNTSVTDYYTNLKRRWDELSCLAPLPIC-CDSGTAIADYDNNR---- 158
+ +++ EIA KQG+ VT+++TNL+ W+EL P+P C C NN+
Sbjct: 38 VAELQEEIANLKQGSKKVTEFFTNLRGLWEELDQYRPMPQCTCPIQCTCLAVRNNKSFIA 97
Query: 159 --RLMQFLMGLGDEYDNVKNQILLQDPLPSLNKAFSMIISVEKQRE 202
R+++FLMGL ++Y V +Q+LL DPLP +N+ FSM++ E++ +
Sbjct: 98 EDRIIKFLMGLNEDYQGVTSQVLLMDPLPQINRVFSMVMQQERKMQ 143
>IMGA|Medtr3g169320.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 44131380-44131084 H
EGN_Mt090430 20090702
Length = 98
Score = 85.5 bits (210), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/92 (45%), Positives = 60/92 (65%), Gaps = 3/92 (3%)
Query: 599 MLKTKDQVLLALKSFFNYVLTHYDKRVKAIRTDNGTEFVNAACSTFLQDHGTLHQRTCVY 658
+ KTK +V ++++F + ++ +VK +RTDNG EF+ F G HQ +CV
Sbjct: 2 LCKTKSEVSKSVQNFILNIENQFNCKVKTVRTDNGPEFL---MPDFYSSKGIEHQTSCVE 58
Query: 659 TPQQNGVVERKHRTLLNIARTLLFQSKFPSIF 690
TPQQNG VERKH+ +LN+AR +LFQSKF +F
Sbjct: 59 TPQQNGRVERKHQHILNVARAMLFQSKFMVLF 90
>IMGA|Medtr5g032700.1 Polynucleotidyl transferase, Ribonuclease H
fold, putative chr05_pseudomolecule_IMGAG_V3
13269922-13268996 E EGN_Mt090430 20090702
Length = 213
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 72/135 (53%), Gaps = 1/135 (0%)
Query: 10 VNTPLTGQNYLSWSRSVQIALRAKKKLGFINGKIKPPSPESDDYDRWLTADSMVVSWLLN 69
V + L NYL+WSRS+Q AL AK KL FI+G I+ P+ + W ++ SW+LN
Sbjct: 31 VTSLLIESNYLAWSRSMQRALGAKTKLSFIDGSIRVPAIDDLTRGAWERCIHLIHSWILN 90
Query: 70 AISKDISNAFVFCKNAKALWDELKQRYGESNGPMIYQIEREIAGYKQGNTSVTDYYTNLK 129
++S IS +F + K+ + +++ + + I KQG+ V DY+T +K
Sbjct: 91 SVSPQISQTIIFHVHVIDFGKNSKKDF-KADSIRVSILRYAINNLKQGSKYVLDYFTKMK 149
Query: 130 RRWDELSCLAPLPIC 144
W+EL+ P P C
Sbjct: 150 TLWEELNSQRPTPNC 164
>IMGA|Medtr5g049200.1 retroelement pol polyprotein-like, related
chr05_pseudomolecule_IMGAG_V3 21011474-21012209 E
EGN_Mt090430 20090702
Length = 210
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 9/151 (5%)
Query: 370 DNWIIDTGATDHITPHLSFYDHVIKLNPPTTIRLPDNSTRLVTHIGNIRLNARIVLYNVL 429
++WI+D+GA++H+T L Y H +K + LP+ T T G ++L + L NVL
Sbjct: 34 ESWILDSGASNHMTGTLQ-YMHDVKEVIGCPVGLPNCRTTTCTKEGTVKLTDGLRLENVL 92
Query: 430 YVPSFSCNLLSISLLTRTCGLSVHSFPEYCLFQDLLTSEVLARGTVIRDLYYLTKDSFSK 489
YVP +CNL+SIS L +V +C QD + ++ G LY+ +
Sbjct: 93 YVPKLNCNLISISQLLDELNCNVQFNGNFCAIQDRTSKMLIGAGEQRDGLYFFRE----- 147
Query: 490 QINCNSVARCSEHNTHLALLWHARLGHVSFK 520
V C T+ +WH RLGH S+K
Sbjct: 148 ---VPKVKACKVEGTNQLEVWHKRLGHPSWK 175
>IMGA|Medtr8g101650.1 Putative retroelement pol polyprotein,
chr08_pseudomolecule_IMGAG_V3 22106944-22106630 H
EGN_Mt090430 20090702
Length = 104
Score = 80.5 bits (197), Expect = 6e-15, Method: Composition-based stats.
Identities = 39/93 (41%), Positives = 57/93 (61%)
Query: 945 MNNELASLEQNNTWILTDLPPNTKPVGCKWVYRIKYNADGSIDRYKARLVAKGYNQLLGL 1004
M N+L ++ N W LT L + +GCKW YRIK+ +G+I+R+K L+ K Y + G+
Sbjct: 1 MTNKLRAITTKNAWSLTALSKDKVVIGCKWEYRIKHKVNGTIERFKTFLMVKDYTRQEGV 60
Query: 1005 DYLHTFSPVAKLVTVRVFLTIAVANSWSVQHLD 1037
+ L TFS VAK+ V + L+I VA +Q LD
Sbjct: 61 NSLDTFSLVAKITIVCLLLSIVVAKGRILQQLD 93
>IMGA|Medtr3g058920.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 13083640-13084056 H
EGN_Mt090430 20090702
Length = 138
Score = 79.3 bits (194), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/127 (29%), Positives = 68/127 (53%), Gaps = 1/127 (0%)
Query: 535 ELMCSVCPVAKQTRLSFPTSV-ISSVHVFDLVHIDLWGPYKLKSITNAVYMLTIVDDYSR 593
E C++C V K +R +F + + + + HV ++VH D++GP K+ + + Y +T VD+YS+
Sbjct: 12 EKSCNICLVGKHSRSAFKSELKMRAKHVLNVVHSDIYGPIKVPTYSGNRYFITFVDEYSK 71
Query: 594 FCWTYMLKTKDQVLLALKSFFNYVLTHYDKRVKAIRTDNGTEFVNAACSTFLQDHGTLHQ 653
W Y++K K L K F ++K + T G E+ + ++ + G +H+
Sbjct: 72 MLWLYLIKLKSDALEVFKKFKVLPEKQSGMKLKILITYGGGEYTSKDFESYCTNQGIIHE 131
Query: 654 RTCVYTP 660
T YTP
Sbjct: 132 VTTPYTP 138
>IMGA|Medtr4g025100.1 Integrase, catalytic region; Zinc finger,
CCHC-type; Retrotransposon gag protein, putative
chr04_pseudomolecule_IMGAG_V3 5913545-5913860 H
EGN_Mt090430 20090702
Length = 84
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 48/65 (73%)
Query: 1330 RAMASTVCEIQWLTSLLTDFHIHIARPIPLHCDNKAAIHIAANPVFHERTKHIDIDCHVV 1389
+A+A E +W+ L DF I + PI ++CDN +++HI ANPVFHERTKHI+IDCHVV
Sbjct: 2 QALAQATSEGKWILYFLDDFPIPHSSPIIIYCDNNSSMHIVANPVFHERTKHIEIDCHVV 61
Query: 1390 RSQLQ 1394
R +++
Sbjct: 62 RDKIK 66
>IMGA|CU571152_16.1 Polynucleotidyl transferase, Ribonuclease H fold
CU571152.5 61656-61988 H EGN_Mt090430 20090702
Length = 110
Score = 76.6 bits (187), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%)
Query: 578 ITNAVYMLTIVDDYSRFCWTYMLKTKDQVLLALKSFFNYVLTHYDKRVKAIRTDNGTEFV 637
+ A Y + +DDYS F W YM+K + ++ +F + T + K +K R DN E+
Sbjct: 1 MGGARYFVLFIDDYSHFTWIYMIKNRHELTQIYINFAKMIQTQFSKVIKVFRRDNAMEYR 60
Query: 638 NAACSTFLQDHGTLHQRTCVYTPQQNGVVERKHRTLLNIARTLLFQSKFP 687
++ +FL + GT + + YT QQ G ERKHR +L+ +L + P
Sbjct: 61 DSKLLSFLSEQGTFSEFSYPYTSQQKGRAERKHRHILDSVCAMLISASCP 110
>IMGA|Medtr5g099250.1 Reverse transcriptase, RNA-dependent DNA
polymerase chr05_pseudomolecule_IMGAG_V3
39665230-39664877 H EGN_Mt090430 20090702
Length = 117
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 62/107 (57%)
Query: 1135 ISQLKTYLDQKFTIKNLGDVKYFLGIEVARADDGMFLTQHKFISEIIQDTGLQDAKIAHS 1194
I +LK +L F +K+L + YFLG+E ++D +FL+Q K+ S+++ GL D KI ++
Sbjct: 11 IEELKQFLCHHFEMKDLEPLSYFLGLEALSSNDDLFLSQAKYASDLVSQAGLTDCKIEYT 70
Query: 1195 PYIQGMKLGTDMGHPLPDPGSYRRLVGRLLYLSMTRPDISYAVQQLS 1241
++ G L D Y VG L+YL+ TRP+ISY V +S
Sbjct: 71 RLEPNIQFTPQDGTLLDDATLYWHFVGSLIYLTNTRPNISYFVHLVS 117
>IMGA|Medtr3g079600.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 18487435-18487012 H
EGN_Mt090430 20090702
Length = 111
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 62/130 (47%), Gaps = 33/130 (25%)
Query: 538 CSVCPVAKQTRLSFPTSVISSVHVFDLVHIDLWGPYKLKSITNAVYMLTIVDDYSRFCWT 597
C++CP+AK RL + S + FDL+H D+WGPY + Y T V
Sbjct: 15 CTICPLAKFKRLPLCSKNNFSPYSFDLIHCDIWGPY-----GKSTYNDTTV--------- 60
Query: 598 YMLKTKDQVLLALKSFFNYVLTHYDKRVKAIRTDNGTEFVNAACSTFLQDHGTLHQRTCV 657
F V T + K +KAI T+N EF A + FL D GT+HQ +
Sbjct: 61 ----------------FYLVKTQFGKVIKAIHTNNAKEF---ARTQFLHDKGTIHQYSYP 101
Query: 658 YTPQQNGVVE 667
YTP+QN VVE
Sbjct: 102 YTPEQNSVVE 111
>IMGA|Medtr7g021510.1 Integrase, catalytic region; Zinc finger,
CCHC-type; Retrotransposon gag protein, putative
chr07_pseudomolecule_IMGAG_V3 5264429-5264084 H
EGN_Mt090430 20090702
Length = 98
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 21/100 (21%)
Query: 1332 MASTVCEIQWLTSLLTDFHIHIARPIPLHCDNKAAIHIAANPVFHERTKHIDIDCHVVRS 1391
MA+T CE++W+ SLL D +I P+ L+C+++ A+HIA VFH RTK+I +DCH +
Sbjct: 1 MANTTCELKWIKSLLLDLNILHKGPMLLNCNSQTALHIAKKLVFHYRTKYIQVDCHFIY- 59
Query: 1392 QLQAGLISTPHLPSNMQLADMFTKSLPSHSYRTFVSKLGL 1431
+FTK+L H ++T + K+ +
Sbjct: 60 --------------------LFTKALERHQFQTVLGKMAI 79
>IMGA|AC235756_37.1 Copia protein, related AC235756.1 212505-212236 H
EGN_Mt090430 20090702
Length = 89
Score = 67.8 bits (164), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 49/88 (55%)
Query: 1346 LTDFHIHIARPIPLHCDNKAAIHIAANPVFHERTKHIDIDCHVVRSQLQAGLISTPHLPS 1405
+ + H + +P+ L DN++ I++A NP+ R+KHI H +R Q+ +I + P+
Sbjct: 1 MKELHCEVKKPLKLKIDNRSTINLAKNPIARGRSKHIKARFHFIREQVTKEMIEVEYCPT 60
Query: 1406 NMQLADMFTKSLPSHSYRTFVSKLGLVD 1433
+QL D FTK+ + KLGL++
Sbjct: 61 EVQLGDGFTKAFKIDRFTCLRDKLGLIE 88
>IMGA|Medtr8g128710.1 Polynucleotidyl transferase, Ribonuclease H
fold chr08_pseudomolecule_IMGAG_V3 30179997-30181475 E
EGN_Mt090430 20090702
Length = 98
Score = 67.4 bits (163), Expect = 5e-11, Method: Composition-based stats.
Identities = 33/79 (41%), Positives = 44/79 (55%)
Query: 659 TPQQNGVVERKHRTLLNIARTLLFQSKFPSIFWSELLLAATHIANRLPSENLDWKTPYER 718
TPQ NGV ER ++TLL AR +L FW+E + ++ NR P +++ KT YE
Sbjct: 5 TPQHNGVAERMNQTLLEKARYMLSNVGLTRTFWAEAVNTTCYLVNRGPHTSINLKTLYEL 64
Query: 719 LHGKQVNYSYFRTIGCLCY 737
GK V+YS R GC Y
Sbjct: 65 WPGKSVDYSNLRVFGCTVY 83
>IMGA|Medtr3g083340.1 Integrase, catalytic region, related
chr03_pseudomolecule_IMGAG_V3 19557937-19559015 H
EGN_Mt090430 20090702
Length = 294
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 71/150 (47%), Gaps = 17/150 (11%)
Query: 160 LMQFLMGLGDEYDNVKNQILLQDPLPSLNKAFSMIISVEKQREVQTDSTASSETAAVMLA 219
L QFL GL D++ V+ Q+LL +PLP LN+ +S++I Q +S E+ +M
Sbjct: 14 LPQFLTGLNDQFSIVQTQVLLMEPLPCLNRVYSLVI--------QEESKDVFESVILM-- 63
Query: 220 QRNPTGTRGNARAGYTRNLSSARKEERKKQYCSKCKTTGHTIDDCFLIHGYPDWFIELQR 279
NPT + S+ K + C+ C GHT+D C+ HG+P F +
Sbjct: 64 --NPTLDNSADSKKFPGKGKSSFSSGYKSKLCTFCGRHGHTVDTCYKKHGFPPNFGQNSS 121
Query: 280 KKGVD--VRKYYSANNV---VRVASADDPL 304
V+ + + A NV +V S+ P+
Sbjct: 122 VNNVESLLDNVHVAENVEEPSKVQSSSGPM 151
>IMGA|Medtr3g083290.1 Integrase, catalytic region, putative
chr03_pseudomolecule_IMGAG_V3 19547512-19547931 H
EGN_Mt090430 20090702
Length = 139
Score = 66.6 bits (161), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 160 LMQFLMGLGDEYDNVKNQILLQDPLPSLNKAFSMIISVEKQREVQTDSTASSETAAVMLA 219
L QFL GL D++ V+ Q+LL +PLP LN+ +S++I Q +S E+ +M
Sbjct: 14 LPQFLTGLNDQFSIVQTQVLLMEPLPCLNRVYSLVI--------QEESKDVFESVILM-- 63
Query: 220 QRNPTGTRGNARAGYTRNLSSARKEERKKQYCSKCKTTGHTIDDCFLIHGYPDWF 274
NPT + S+ K + C+ C GHT+D C+ HG+P F
Sbjct: 64 --NPTLDNSADSKKFPGKGKSSFSSGYKSKLCTFCGRHGHTVDTCYKKHGFPPNF 116
>IMGA|Medtr5g015200.1 Helix-turn-helix, AraC type
chr05_pseudomolecule_IMGAG_V3 5047325-5042492 H
EGN_Mt090430 20090702
Length = 372
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 67/158 (42%), Gaps = 50/158 (31%)
Query: 1243 FMQVPHHSHLKAALTVVKYLKGTSFTGLFLPAKNDLKLRAFSDADWASCSDSRRSITGFC 1302
F P ++LKA + + ++K + GLF A + L+ F ++D
Sbjct: 24 FKVYPIDAYLKAVMHNLMFIKTSPCQGLFFGASSSRSLKWFRNSDL-------------- 69
Query: 1303 IFLGTSLISWKTKKQSTVSRSSAESEYRAMASTVCEIQWLTSLLTDFHIHIARPIPLHC- 1361
++A A CE Q + L DFHI LH
Sbjct: 70 --------------------------HQAFAQATCEAQRILYLHQDFHI-------LHAN 96
Query: 1362 --DNKAAIHIAANPVFHERTKHIDIDCHVVRSQLQAGL 1397
DN+ HIA N VF E+T HI+IDCHV+R ++QAG+
Sbjct: 97 FYDNQYGFHIAVNSVFCEQTIHIEIDCHVIRDKIQAGI 134
>IMGA|Medtr3g162300.1 retrotransposon like protein, putative
chr03_pseudomolecule_IMGAG_V3 42355834-42354953 H
EGN_Mt090430 20090702
Length = 58
Score = 64.3 bits (155), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/43 (65%), Positives = 34/43 (79%)
Query: 1288 WASCSDSRRSITGFCIFLGTSLISWKTKKQSTVSRSSAESEYR 1330
WA C +RRS T +CIFLG++ ISW +KKQ TVSRSS E+EYR
Sbjct: 8 WAGCPLTRRSTTDYCIFLGSNCISWASKKQPTVSRSSTEAEYR 50
>IMGA|Medtr5g086740.1 Reverse transcriptase, RNA-dependent DNA
polymerase chr05_pseudomolecule_IMGAG_V3
33353678-33353912 H EGN_Mt090430 20090702
Length = 57
Score = 63.5 bits (153), Expect = 6e-10, Method: Composition-based stats.
Identities = 26/40 (65%), Positives = 33/40 (82%)
Query: 968 KPVGCKWVYRIKYNADGSIDRYKARLVAKGYNQLLGLDYL 1007
K VGC+WVY+IKY A G I++YKARLVAKGY Q+ G D++
Sbjct: 12 KIVGCRWVYKIKYKASGEIEKYKARLVAKGYTQVEGEDFV 51
>IMGA|Medtr8g043330.1 F6N18.1, related chr08_pseudomolecule_IMGAG_V3
9341518-9340611 H EGN_Mt090430 20090702
Length = 155
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%)
Query: 1293 DSRRSITGFCIFLGTSLISWKTKKQSTVSRSSAESEYRAMASTVCEIQWLTSLLTDFHIH 1352
D ++S T + +G + ISW +KKQ V+ SS+E++Y A + C+ W+ LL + +
Sbjct: 69 DDKKSTTCYLFMIGAAPISWSSKKQGIVALSSSEAKYVATSYAACQALWIEMLLEELNAF 128
Query: 1353 IARPIPLHCDNKAAIHIAANPVFHER 1378
I L DNK AI +A P+ H +
Sbjct: 129 EVDRIKLLVDNKLAIDLADRPISHGK 154
>IMGA|Medtr3g089920.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 21314429-21315168 H
EGN_Mt090430 20090702
Length = 210
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/202 (24%), Positives = 81/202 (40%), Gaps = 46/202 (22%)
Query: 620 HYDKRVKAIRTDNGTEFVNAACSTFLQDHGTLHQRTCVYTPQQNGVVERKHRTLLNIART 679
+ K+VK ++ DNG EF + + F + G TPQQN V +R ++TLL AR
Sbjct: 21 QFGKKVKRLQIDNGLEFCWSEFNEFCKTEGISRHHMVRNTPQQNSVAKRMNQTLLERARC 80
Query: 680 LLFQSKFPSIFWSELLLAATHIANRLPSENLDWKTPYERLHGKQVNYSYFRTIGCLCYAT 739
+L + FW E T Y+R
Sbjct: 81 MLSNAGLTRTFWGETGFGCT---------------------------VYYRV-------- 105
Query: 740 NTVPHKQKFDPRAFPCALLGYAQNQKAYKLYCLTTKSILVSRDVVFMENIFPFHQTNPTD 799
++ K + RA +GY K Y+++ + +++SR+VVF E + NP
Sbjct: 106 ----NEGKLESRAKKRVFVGYGDGVKEYRIWSPSENRVILSRNVVFDEIVM----FNP-- 155
Query: 800 VTTFVLPK-CAVDTDPTFFESQ 820
+ F +P+ C ++ ES+
Sbjct: 156 IVKFNIPENCGIEKQVEHRESE 177
>IMGA|Medtr3g101210.1 Reverse transcriptase, RNA-dependent DNA
polymerase chr03_pseudomolecule_IMGAG_V3
24473881-24473486 H EGN_Mt090430 20090702
Length = 131
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 69/135 (51%), Gaps = 11/135 (8%)
Query: 1160 IEVARADDGMFLTQHKFISEIIQDTGLQD--AKIAHSP--YIQGMKLGTDMGHPLPDPGS 1215
+E+ G+ L Q + SEI++ + D + I H+ I +K D G DP
Sbjct: 1 MEILINSKGLILHQTDYASEILKKFNMLDCNSTITHADANIIYEVK-EEDEG---VDPTM 56
Query: 1216 YRRLVGRLLYLSMTRPDISYAVQQLSQFMQVPHHSHLKAALTVVKYLKGTSFTG---LFL 1272
+RRL+G L YL +RP ISY V +S+FM P ++ +A +++Y+ T G L +
Sbjct: 57 FRRLIGSLRYLCQSRPGISYLVGIVSRFMSNPLKTNFLSAKKILRYINSTLQYGILFLVV 116
Query: 1273 PAKNDLKLRAFSDAD 1287
A L + +SDAD
Sbjct: 117 QATEQLDMEGYSDAD 131
>IMGA|Medtr6g036540.1 Zinc finger, CCHC-type
chr06_pseudomolecule_IMGAG_V3 8117470-8116658 H
EGN_Mt090430 20090702
Length = 270
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Query: 14 LTGQNYLSWSRSVQIALRAKKKLGFINGKIKPPSPE-SDDYDRWLTADSMVVSWLLNAIS 72
L G NY W ++ L+ ++ ++ G K P+ ++ + W + + +++W +
Sbjct: 14 LNGSNYNQWPEAMCGFLKGRRLWRYVTGDKKCPTISLAEKLEEWDSKNHQIITWCRKTST 73
Query: 73 KDISNAFVFCKNAKALWDELKQRYGESNGPMIYQIEREIAGYK-QGNTSVTDYYTNLKRR 131
I F +NAK +WD LKQRY S+ YQ+ ++++ K Q V ++ ++
Sbjct: 74 PSIHLQFGRFENAKEVWDYLKQRYTISDLSHQYQLLKDLSNLKQQSGQPVYEFLAQMEII 133
Query: 132 WDEL-SC---LAPLP 142
W++L SC L PLP
Sbjct: 134 WNQLASCEPFLNPLP 148
>IMGA|Medtr8g015810.1 Ty1/copia-element polyprotein, putative
chr08_pseudomolecule_IMGAG_V3 2876704-2878630 E
EGN_Mt090430 20090702
Length = 64
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%)
Query: 1036 LDINNAYLHGTIDEDIYMQIPPGYDKAAEGQVCKLQRSLYGLKQAGRQWNKALTTSLL 1093
+D++NA+LHG + ED+YM++P G+ ++ VCKL++S Y LK A + W +LL
Sbjct: 1 MDVHNAFLHGDLQEDVYMKLPRGFHTSSSRLVCKLRKSQYVLKHAPQCWFAKRLVALL 58
>IMGA|Medtr7g135120.1 Copia protein, related
chr07_pseudomolecule_IMGAG_V3 32083970-32083668 H
EGN_Mt090430 20090702
Length = 100
Score = 57.8 bits (138), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 45/78 (57%)
Query: 1357 IPLHCDNKAAIHIAANPVFHERTKHIDIDCHVVRSQLQAGLISTPHLPSNMQLADMFTKS 1416
+ L DNK+AI++A N +FH + KH++ H +R Q+ + + P+ QL D+FTK+
Sbjct: 12 VKLKSDNKSAINLAKNSIFHGKRKHVETRFHFMRDQVNKNELIVEYCPTQDQLTDLFTKA 71
Query: 1417 LPSHSYRTFVSKLGLVDF 1434
L + ++ +V+F
Sbjct: 72 LKRDQFLKLRREIRVVNF 89
>IMGA|Medtr5g076530.1 Polynucleotidyl transferase, Ribonuclease H
fold, putative chr05_pseudomolecule_IMGAG_V3
28013549-28012814 E EGN_Mt090430 20090702
Length = 98
Score = 57.4 bits (137), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 57/99 (57%), Gaps = 10/99 (10%)
Query: 29 ALRAKKKLGFINGKIKPPSPESDD-----YDRWLTADSMVVSWLLNAISKDISNAFVFCK 83
AL K K F++G I P P++DD Y+R +++V +W++N++S I+ + V +
Sbjct: 4 ALAMKNKFKFVDGFI--PIPDADDLNCAAYER---CNNLVHTWIINSVSPSIAQSVVSIE 58
Query: 84 NAKALWDELKQRYGESNGPMIYQIEREIAGYKQGNTSVT 122
N +W++LK R+ + Q+++E A KQGN ++
Sbjct: 59 NVVDMWNDLKDRFMRCGRIRVAQLQQENANLKQGNRKIS 97
>IMGA|Medtr8g012170.1 polyprotein, putative
chr08_pseudomolecule_IMGAG_V3 1857213-1857446 H
EGN_Mt090430 20090702
Length = 77
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 37/63 (58%)
Query: 1066 QVCKLQRSLYGLKQAGRQWNKALTTSLLSQGFTQSSFDHCLFTKGCGASFIALLVYVDDC 1125
QVCKL++SLYGLKQA + W +AL LL F + D LF +F LVYVDD
Sbjct: 15 QVCKLRKSLYGLKQAPQAWFQALQKFLLGYNFQNAKSDTSLFIYVKANTFAYFLVYVDDI 74
Query: 1126 LIT 1128
+T
Sbjct: 75 PLT 77
>IMGA|Medtr5g007330.1 Integrase, catalytic region, related
chr05_pseudomolecule_IMGAG_V3 1052977-1052588 H
EGN_Mt090430 20090702
Length = 129
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 15/112 (13%)
Query: 128 LKRRWDELSCLAPLPIC-------CDSGTAIADYDNNRRLMQFLMGLGDEYDNVKNQILL 180
+K W EL L P P C C + +Y N ++ FL GL Y NV+ QILL
Sbjct: 1 MKILWYELEDLRPTPSCSCVNPCTCSLSNYVHNYKNMEYIICFLKGLNANYSNVRTQILL 60
Query: 181 QDPLPSLNKAFSMIISVEKQREVQTDSTASSETAAVMLAQRNPTGTRGNARA 232
DPLPS++K +S SV +Q +D ++ AV + NP ++
Sbjct: 61 MDPLPSISKVYS---SVSQQGFNHSD-----DSTAVSINYTNPKNLSNQSKG 104
>IMGA|Medtr2g055600.1 Putative receptor kinase, , identical
chr02_pseudomolecule_IMGAG_V3 14928414-14929094 H
EGN_Mt090430 20090702
Length = 226
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 87/217 (40%), Gaps = 25/217 (11%)
Query: 60 DSMVVSWLLNAISKDISNAFVFCKNAKALWDELKQRYGESNGPMIYQIER---EIAGYKQ 116
D+ + + + I + N F + +W + K + + +YQ+ + + G ++
Sbjct: 3 DAQLCIVIKSTIHDSVKNFFTTLLTCETVWKKAKI-FDIGDTRRLYQVCQNFMRVVGPRR 61
Query: 117 GNTSVTDYYTNLKRRWDELSCLAPLPICCDSGTAIADYDNNRR--LMQFLMGLGDEYDNV 174
+ S+ DY ++ + + + P +G +Y+ +M L GL EY V
Sbjct: 62 LDGSMADYLDKIQGLLHDFNEIMP-----PAGAPTKEYEQRETFFMMLALCGLPMEYSLV 116
Query: 175 KNQILLQDPLPSLNKAFSMIISVEKQREVQTDSTASSETAAVMLAQRNPTGTRGNARAGY 234
+NQIL P+ N A S ++ + ++ + + ++ Q G
Sbjct: 117 RNQILDSPIGPTFNSAMSTLLLILEKSSLNVEVINKPVDSSASAFQSGEYG--------- 167
Query: 235 TRNLSSARKEERKKQYCSKCKTTGHTIDDCFLIHGYP 271
+RK + C C GHTID CF IHG P
Sbjct: 168 -----RSRKHGKSCPKCDHCHMIGHTIDRCFDIHGRP 199
>IMGA|AC137826_20.1 hypothetical protein AC137826.21 78161-79047 H
EGN_Mt090430 20090702
Length = 157
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 127 NLKRRWDELSCLAPLPICCDSGTAIADYDNNRRL--MQFLMGLGDEYDNVKNQILLQDPL 184
N+ + DE + P P C+ + D+ RL + F MGL D+Y + + QIL+
Sbjct: 32 NVSKELDEFDSIVP-PTSCNCAKSKEYMDSMFRLKPLHFFMGLNDKYSHTRCQILMMSEP 90
Query: 185 PSLNKAFSMIISVEKQREVQTD 206
P++N+ ++MII + QRE+ +D
Sbjct: 91 PTVNQCYAMIIQDKSQRELSSD 112
>IMGA|Medtr4g045010.1 Polynucleotidyl transferase, Ribonuclease H
fold, related chr04_pseudomolecule_IMGAG_V3
10571280-10570869 H EGN_Mt090430 20090702
Length = 106
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 1357 IPLHCDNKAAIHIAANPVFHERTKHIDIDCHVVRSQLQAGLISTPHLPSNMQLADMFTKS 1416
+ L DN + I++A NP+ H R+KHI++ H +R Q+ G + H S Q+AD+ TK
Sbjct: 25 VTLKIDNISTINLAKNPIAHGRSKHIEMRFHYLREQVSKGKLKLEHSKSENQIADVLTKG 84
Query: 1417 L 1417
+
Sbjct: 85 V 85
>IMGA|Medtr4g045170.1 hypothetical protein
chr04_pseudomolecule_IMGAG_V3 10725937-10725201 H
EGN_Mt090430 20090702
Length = 197
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 1357 IPLHCDNKAAIHIAANPVFHERTKHIDIDCHVVRSQLQAGLISTPHLPSNMQLADMFTKS 1416
+ L DN + I++A NP+ H R+KHI++ H +R Q+ G + H S Q+AD+ TK
Sbjct: 116 VTLKIDNISTINLAKNPIAHGRSKHIEMRFHYLREQVSKGKLKLEHSKSENQIADVLTKG 175
Query: 1417 L 1417
+
Sbjct: 176 V 176
>IMGA|Medtr3g040850.1 Retrotransposon gag protein
chr03_pseudomolecule_IMGAG_V3 11245103-11243742 H
EGN_Mt090430 20090702
Length = 190
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 49/89 (55%)
Query: 57 LTADSMVVSWLLNAISKDISNAFVFCKNAKALWDELKQRYGESNGPMIYQIEREIAGYKQ 116
+ ++++ +W++N +S +++ ++ +W ELK+R +++ +++++ +I KQ
Sbjct: 7 MECNNVIHTWIMNYVSDSTAHSILYIDIVSDVWRELKERLSKTDRIRVWKLKTKINNLKQ 66
Query: 117 GNTSVTDYYTNLKRRWDELSCLAPLPICC 145
G SV DYY L+ W+ L + C
Sbjct: 67 GTNSVNDYYAELRSLWEVFLNLLIVGCLC 95
>IMGA|Medtr5g029040.1 LTRGag-pol-polymerase 3, related
chr05_pseudomolecule_IMGAG_V3 12052697-12051982 H
EGN_Mt090430 20090702
Length = 223
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 89/227 (39%), Gaps = 32/227 (14%)
Query: 19 YLSWSRSVQIALRAKKKLGFINGKIKPPSPESDDYDRWLTADSMVVSWLLNAISKDISNA 78
Y SW+ ++ L A + I P + + +W D++V W+ + IS D+ +
Sbjct: 6 YDSWA---ELFLNAANAFDVADHIIPPKNATVKEDAQWSCLDAIVKQWIYSTISIDLLHT 62
Query: 79 FVF-CKNAKALWDELKQRYGESNGPMIYQIEREIAGYKQGNTSVTDYYTNLKRRWDELSC 137
+ A+ W+ LK + ++ +E++ + N Y C
Sbjct: 63 ILKPGATAQEAWNRLKDIFHDNKNSRAVYLEQQFSQIHMDNYPNASSY-----------C 111
Query: 138 LAPLPICCDSGTAIADYDNNRRLMQFLMGLGDEYDNVKNQILLQDPLPSLNKAFSMIISV 197
A I G A +R +++ + GL YD++ I DPLPS KA SM+
Sbjct: 112 QALKLIAEQLGNVGAPVSEDRLVLRLVTGLSSGYDSLATIIQQLDPLPSFYKARSMLTLE 171
Query: 198 EKQREVQTDSTA----------------SSETAAVMLAQRNPTGTRG 228
E +R T + + SSE A + RN TG RG
Sbjct: 172 ETRRNKNTGAESALVHTQSDVSSAAPNRSSEVAPSRYSNRN-TGGRG 217
>IMGA|Medtr7g009950.1 hypothetical protein
chr07_pseudomolecule_IMGAG_V3 2001239-2000885 H
EGN_Mt090430 20090702
Length = 74
Score = 50.4 bits (119), Expect = 6e-06, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 21 SWSRSVQIALRAKKKLGFINGKIKPPSPESDDYDRWLTADSMVVSWLLNAISKDISNAFV 80
S + SV + L + KL FING PP E D W ++MV+SWL N++ +IS + +
Sbjct: 5 STTGSVNVVLHSNDKLHFINGAFPPPPDEGHDSTAWGRCNTMVMSWLNNSVEPEISQSII 64
Query: 81 FCK 83
+ +
Sbjct: 65 WMR 67