Jatropha Genome Database

JcCB0288881.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0288881.10 - phase: 0 /partial
         (160 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g019940.1 Fumarate reductase/succinate dehydrogenase ...   124   2e-29

>IMGA|Medtr5g019940.1 Fumarate reductase/succinate dehydrogenase
           flavoprotein, N-terminal; chr05_pseudomolecule_IMGAG_V3
           7498474-7505943 E EGN_Mt090430 20090702
          Length = 631

 Score =  124 bits (311), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 57/67 (85%), Positives = 60/67 (89%)

Query: 93  GSCQGVIALNMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQ 152
           GSCQGVIALNMEDGTLHRF+AASTILATGGYGRAYFSATSAHTCTGDGNAM ARAG+ L+
Sbjct: 210 GSCQGVIALNMEDGTLHRFQAASTILATGGYGRAYFSATSAHTCTGDGNAMAARAGIGLE 269

Query: 153 ILSLFNF 159
            L    F
Sbjct: 270 DLEFVQF 276