Jatropha Genome Database

JcCB0285631.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0285631.10 - phase: 0 
         (82 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|AC233662_37.1 Arginine biosynthesis protein ArgJ AC233662.1...    67   2e-12

>IMGA|AC233662_37.1 Arginine biosynthesis protein ArgJ AC233662.1
          191889-184516 E EGN_Mt090430 20090702
          Length = 470

 Score = 67.4 bits (163), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/64 (43%), Positives = 42/64 (65%), Gaps = 1/64 (1%)

Query: 1  MYCCVPHYVSMKFP-ELSTSKIFSSFSLTKRDFKVFAVASSMDETANYIPAAPIFIPEGP 59
          MY C+PH VS+ F    +TS    S     R+ K+ AV+++ ++ + YIPAAPIF+P+GP
Sbjct: 1  MYSCIPHNVSLHFHFSTTTSPNSKSTMFASRNLKIRAVSTTENQASTYIPAAPIFLPQGP 60

Query: 60 WNQV 63
          W Q+
Sbjct: 61 WKQI 64