Jatropha Genome Database

JcCB0284451.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0284451.30 - phase: 1 /partial
         (113 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g110990.1 5-methyltetrahydropteroyltriglutamate--homo...   216   2e-57
IMGA|Medtr7g103050.2 5-methyltetrahydropteroyltriglutamate--homo...   212   4e-56
IMGA|Medtr7g103050.1 5-methyltetrahydropteroyltriglutamate--homo...   212   4e-56
IMGA|Medtr7g103050.4 Methionine synthase, vitamin-B12 independen...   210   1e-55

>IMGA|Medtr3g110990.1
           5-methyltetrahydropteroyltriglutamate--homocysteine
           S-methyltransferase chr03_pseudomolecule_IMGAG_V3
           28043141-28037951 E EGN_Mt090430 20090702
          Length = 813

 Score =  216 bits (551), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 103/113 (91%), Positives = 108/113 (95%)

Query: 1   FNDIIHSIINMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIA 60
           FNDIIHSII+MDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIP TEEIA
Sbjct: 701 FNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTEEIA 760

Query: 61  DRINKMLAVLEKNILWVNPDCGLKTRKYSEVKPALKNMVAAAKLLRTELASAK 113
           DRINKMLAVLE NILWVNPDCGLKTRKY+EVKPAL NMV AAKL+R +LAS+K
Sbjct: 761 DRINKMLAVLESNILWVNPDCGLKTRKYTEVKPALTNMVDAAKLIRKQLASSK 813


>IMGA|Medtr7g103050.2
           5-methyltetrahydropteroyltriglutamate--homocysteine
           S-methyltransferase chr07_pseudomolecule_IMGAG_V3
           23004854-22999451 E EGN_Mt090430 20090702
          Length = 753

 Score =  212 bits (539), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 101/110 (91%), Positives = 105/110 (95%)

Query: 1   FNDIIHSIINMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIA 60
           FNDIIHSIINMDADVITIENSRSDEKLLSVFREGV YGAGIGPGVYDIHSPRIP T+EIA
Sbjct: 643 FNDIIHSIINMDADVITIENSRSDEKLLSVFREGVVYGAGIGPGVYDIHSPRIPPTDEIA 702

Query: 61  DRINKMLAVLEKNILWVNPDCGLKTRKYSEVKPALKNMVAAAKLLRTELA 110
           DRINKMLAVLEKN+LWVNPDCGLKTRKY+EVKPAL NMVAAAK +R ELA
Sbjct: 703 DRINKMLAVLEKNVLWVNPDCGLKTRKYTEVKPALLNMVAAAKQIRNELA 752


>IMGA|Medtr7g103050.1
           5-methyltetrahydropteroyltriglutamate--homocysteine
           S-methyltransferase chr07_pseudomolecule_IMGAG_V3
           23004854-22999451 E EGN_Mt090430 20090702
          Length = 763

 Score =  212 bits (539), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 101/110 (91%), Positives = 105/110 (95%)

Query: 1   FNDIIHSIINMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIA 60
           FNDIIHSIINMDADVITIENSRSDEKLLSVFREGV YGAGIGPGVYDIHSPRIP T+EIA
Sbjct: 653 FNDIIHSIINMDADVITIENSRSDEKLLSVFREGVVYGAGIGPGVYDIHSPRIPPTDEIA 712

Query: 61  DRINKMLAVLEKNILWVNPDCGLKTRKYSEVKPALKNMVAAAKLLRTELA 110
           DRINKMLAVLEKN+LWVNPDCGLKTRKY+EVKPAL NMVAAAK +R ELA
Sbjct: 713 DRINKMLAVLEKNVLWVNPDCGLKTRKYTEVKPALLNMVAAAKQIRNELA 762


>IMGA|Medtr7g103050.4 Methionine synthase, vitamin-B12 independent
           chr07_pseudomolecule_IMGAG_V3 23004854-22999451 E
           EGN_Mt090430 20090702
          Length = 226

 Score =  210 bits (535), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 101/110 (91%), Positives = 105/110 (95%)

Query: 1   FNDIIHSIINMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIA 60
           FNDIIHSIINMDADVITIENSRSDEKLLSVFREGV YGAGIGPGVYDIHSPRIP T+EIA
Sbjct: 116 FNDIIHSIINMDADVITIENSRSDEKLLSVFREGVVYGAGIGPGVYDIHSPRIPPTDEIA 175

Query: 61  DRINKMLAVLEKNILWVNPDCGLKTRKYSEVKPALKNMVAAAKLLRTELA 110
           DRINKMLAVLEKN+LWVNPDCGLKTRKY+EVKPAL NMVAAAK +R ELA
Sbjct: 176 DRINKMLAVLEKNVLWVNPDCGLKTRKYTEVKPALLNMVAAAKQIRNELA 225