Jatropha Genome Database

JcCB0283351.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0283351.10 + phase: 1 /pseudo/partial/short
         (49 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g044090.1 Nucleoside phosphatase GDA1/CD39 chr05_pseu...    62   7e-11
IMGA|Medtr7g099940.1 Nucleoside phosphatase GDA1/CD39 chr07_pseu...    49   5e-07
IMGA|Medtr4g042800.1 Nucleoside phosphatase GDA1/CD39 chr04_pseu...    49   7e-07
IMGA|Medtr7g099970.1 Nucleoside phosphatase GDA1/CD39 chr07_pseu...    47   2e-06
IMGA|Medtr7g100010.1 Nucleoside phosphatase GDA1/CD39 chr07_pseu...    47   3e-06

>IMGA|Medtr5g044090.1 Nucleoside phosphatase GDA1/CD39
          chr05_pseudomolecule_IMGAG_V3 18274985-18268211 E
          EGN_Mt090430 20090702
          Length = 364

 Score = 62.0 bits (149), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 26/36 (72%), Positives = 30/36 (83%)

Query: 2  EKGVYTWVAVNYALGTLGGDPRETTGIVELGGTSLQ 37
          ++GVY WV  N+ALGTLGGDP ETTGI+ELGG S Q
Sbjct: 23 DEGVYAWVVANHALGTLGGDPSETTGIIELGGASAQ 58


>IMGA|Medtr7g099940.1 Nucleoside phosphatase GDA1/CD39
           chr07_pseudomolecule_IMGAG_V3 22415561-22421323 F
           EGN_Mt090430 20090702
          Length = 467

 Score = 48.9 bits (115), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 20/38 (52%), Positives = 27/38 (71%)

Query: 2   EKGVYTWVAVNYALGTLGGDPRETTGIVELGGTSLQTA 39
           ++G Y WV +NY LG LG D  +T G+V+LGG S+Q A
Sbjct: 191 QEGAYQWVTINYLLGNLGKDYSKTVGVVDLGGGSVQMA 228


>IMGA|Medtr4g042800.1 Nucleoside phosphatase GDA1/CD39
           chr04_pseudomolecule_IMGAG_V3 10300592-10296938 E
           EGN_Mt090430 20090702
          Length = 455

 Score = 48.5 bits (114), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 21/38 (55%), Positives = 28/38 (73%)

Query: 2   EKGVYTWVAVNYALGTLGGDPRETTGIVELGGTSLQTA 39
           ++G Y WV VNYALGTLG    +T G+++LGG S+Q A
Sbjct: 178 QEGSYLWVTVNYALGTLGKKFTKTVGVMDLGGGSVQMA 215


>IMGA|Medtr7g099970.1 Nucleoside phosphatase GDA1/CD39
           chr07_pseudomolecule_IMGAG_V3 22428858-22432271 E
           EGN_Mt090430 20090702
          Length = 456

 Score = 47.0 bits (110), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/38 (52%), Positives = 27/38 (71%)

Query: 2   EKGVYTWVAVNYALGTLGGDPRETTGIVELGGTSLQTA 39
           ++G Y WV VNYALG LG    +T G+++LGG S+Q A
Sbjct: 168 QEGSYLWVTVNYALGNLGKKYTKTVGVMDLGGGSVQMA 205


>IMGA|Medtr7g100010.1 Nucleoside phosphatase GDA1/CD39
           chr07_pseudomolecule_IMGAG_V3 22440105-22443932 F
           EGN_Mt090430 20090702
          Length = 467

 Score = 46.6 bits (109), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/38 (52%), Positives = 27/38 (71%)

Query: 2   EKGVYTWVAVNYALGTLGGDPRETTGIVELGGTSLQTA 39
           ++G Y WV VNYALG LG    +T G+++LGG S+Q A
Sbjct: 178 QEGSYLWVTVNYALGKLGKKFTKTVGVMDLGGGSVQMA 215