Jatropha Genome Database

JcCB0280191.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0280191.10 + phase: 0 /pseudo/partial
         (160 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g014960.1 Aminotransferase, class V; chr05_pseudomole...   160   2e-40

>IMGA|Medtr5g014960.1 Aminotransferase, class V;
           chr05_pseudomolecule_IMGAG_V3 4892335-4897752 E
           EGN_Mt090430 20090702
          Length = 454

 Score =  160 bits (406), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 78/89 (87%), Positives = 85/89 (95%)

Query: 1   CELAKKEMEYDDKRIRALQERLLNGIKAKLDGVVVNGSVERRYAGNLNVSFAYVEGESLL 60
           CE+A KEMEYD+KRI ALQ+RLLNGI+ KLDGVVVNGS+ERRY GNLN+SFAYVEGESLL
Sbjct: 305 CEVALKEMEYDEKRISALQQRLLNGIRDKLDGVVVNGSMERRYVGNLNLSFAYVEGESLL 364

Query: 61  MGLKDVAVSSGSACTSASLEPSYVLRALG 89
           MGLK+VAVSSGSACTSASLEPSYVLRALG
Sbjct: 365 MGLKEVAVSSGSACTSASLEPSYVLRALG 393