Jatropha Genome Database

JcCB0279501.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0279501.10 - phase: 0 
         (325 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g022470.1 hypothetical protein chr05_pseudomolecule_I...   275   3e-74
IMGA|Medtr3g093090.1 PIF-like orf1, related chr03_pseudomolecule...    93   2e-19
IMGA|Medtr6g070990.1 hypothetical protein chr06_pseudomolecule_I...    90   1e-18
IMGA|Medtr4g133610.1 hypothetical protein chr04_pseudomolecule_I...    78   6e-15
IMGA|Medtr1g031000.1 hypothetical protein chr01_pseudomolecule_I...    77   9e-15
IMGA|Medtr7g035200.1 hypothetical protein chr07_pseudomolecule_I...    75   3e-14
IMGA|Medtr8g044610.1 hypothetical protein chr08_pseudomolecule_I...    65   3e-11
IMGA|Medtr6g093550.1 hypothetical protein chr06_pseudomolecule_I...    49   3e-06

>IMGA|Medtr5g022470.1 hypothetical protein
           chr05_pseudomolecule_IMGAG_V3 8764112-8762509 E
           EGN_Mt090430 20090702
          Length = 298

 Score =  275 bits (702), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 148/319 (46%), Positives = 199/319 (62%), Gaps = 27/319 (8%)

Query: 1   MATRVTRSRQGLTQQPEPQSRARWTTGLTKIFADLLVDQVQKGNKLNNNSFNKKAWTVMC 60
           MA R+TRSR+  TQQ E QSRA+WT  LTKI ADL+VDQV KGNK  NNSFNKKAW  +C
Sbjct: 1   MARRITRSRRLETQQLE-QSRAKWTASLTKILADLMVDQVHKGNK-QNNSFNKKAWKHIC 58

Query: 61  DEFYQKTGLRWDKEQLKNRYSVMKRQHSIVKSLINQREFCLDASTGNVIASNEAWNEYIK 120
           D F+ KTGL+WDKE+LKNR+SV++RQ++IVK ++++ +F  D +TG +IA++E W EYIK
Sbjct: 59  DGFHNKTGLKWDKEKLKNRHSVLRRQYAIVKPILDEGDFVWDEATGAIIANDEIWAEYIK 118

Query: 121 AHPDAEPIRVSGCPIFKQLGVIFSDALXXXXXXXXXXXXXXFPSSVPFERPFSTIREVEP 180
            +PDAE ++  GC IFK+L  IFS+A               + +S     P +   E+  
Sbjct: 119 NNPDAETVKSGGCSIFKELCTIFSEA--------ATNGQHEYAASDSEHTPRAPCPEL-- 168

Query: 181 LNTIQXXXXXXXXXXXXXXXXXQEKYQPXXXXXXXXXXXXXALDSANAANRKRGRKGIDD 240
           L+T Q                  +  QP                +A  ++RKRGRKG+D 
Sbjct: 169 LSTHQ--DESSSESEDEEDANGPQTVQPTTP-------------TATCSSRKRGRKGVDG 213

Query: 241 XXXXXXXXXXXXXRLRTAAIRQISERYSVADCIKELDAMQGVEEGIYFAALDLFDNPNAR 300
                        ++R AAI Q + +YS++DCIK+LD M+GV++ +YFAALDLF+NPNAR
Sbjct: 214 AIADAILEMASASKMRAAAIEQHNSKYSISDCIKDLDLMEGVDQQLYFAALDLFNNPNAR 273

Query: 301 EIFLSLKGDKRMIWLRGKC 319
           EIFLSLK DKR+ WL  +C
Sbjct: 274 EIFLSLKKDKRLTWLHHRC 292


>IMGA|Medtr3g093090.1 PIF-like orf1, related
           chr03_pseudomolecule_IMGAG_V3 22045852-22047141 E
           EGN_Mt090430 20090702
          Length = 299

 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 72/130 (55%), Gaps = 1/130 (0%)

Query: 18  PQSRARWTTGLTKIFADLLVDQVQKGNKLNNNSFNKKAWTVMCDEFYQKTGLRWDKEQLK 77
           P  +A WT    KIF DL +++  KGNK  ++ F+K+ W  +   FY KTG+R+DK Q+K
Sbjct: 98  PTPKASWTPAYHKIFVDLCLEETLKGNKAGSH-FSKEGWKNIMGYFYAKTGVRYDKRQIK 156

Query: 78  NRYSVMKRQHSIVKSLINQREFCLDASTGNVIASNEAWNEYIKAHPDAEPIRVSGCPIFK 137
           N Y   ++Q  I   LI       D  T    AS E W +Y+K +P+A   R    P  +
Sbjct: 157 NHYDFTRKQWKIWVKLIGDDNMKWDPKTNTFDASEEDWLDYLKENPEAAQFRFKEIPFPE 216

Query: 138 QLGVIFSDAL 147
           +L +I+++++
Sbjct: 217 KLDIIYAESI 226


>IMGA|Medtr6g070990.1 hypothetical protein
           chr06_pseudomolecule_IMGAG_V3 13579011-13576995 E
           EGN_Mt090430 20090702
          Length = 111

 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/98 (45%), Positives = 63/98 (64%), Gaps = 2/98 (2%)

Query: 228 AANRKRGRKGIDDXXXXXXXXXXXXXRLRTAAIRQISERYSVADCIKELDAMQGVEEGIY 287
           +  RKRGRK   D             +LR  AI +  +++S++ CI  LD MQG++E IY
Sbjct: 14  SGGRKRGRKASGDAIVDAMMQIAAASKLRANAIMKNEDKFSISKCINVLDEMQGLDERIY 73

Query: 288 FAALDLFDN-PNAREIFLSLKGDKRMIWLRGK-CTAHL 323
           F ALDLF+N PNARE+F+S+K +KRM WL+GK C + +
Sbjct: 74  FFALDLFENHPNAREVFISIKSEKRMPWLQGKFCVSSI 111


>IMGA|Medtr4g133610.1 hypothetical protein
           chr04_pseudomolecule_IMGAG_V3 32065509-32067885 H
           EGN_Mt090430 20090702
          Length = 478

 Score = 77.8 bits (190), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 1/121 (0%)

Query: 24  WTTGLTKIFADLLVDQVQKGNKLNNNSFNKKAWTVMCDEFYQKTGLRWDKEQLKNRYSVM 83
           W   +TK F D++VD+V KGN ++N  F+ + WT M +     T   +++EQLK +   +
Sbjct: 203 WPDIVTKTFIDIMVDEVTKGN-MSNGVFHTRTWTSMTNRLNSITNCSYEEEQLKAKMHCL 261

Query: 84  KRQHSIVKSLINQREFCLDASTGNVIASNEAWNEYIKAHPDAEPIRVSGCPIFKQLGVIF 143
           +       SL+    F  ++ T  V AS E W  Y+K H  A   +  GC  ++ L +IF
Sbjct: 262 RAMFHEFYSLLQNVGFVWNSETNTVTASEEVWKNYLKTHDKASQFQNKGCDHYRLLEIIF 321

Query: 144 S 144
           +
Sbjct: 322 N 322


>IMGA|Medtr1g031000.1 hypothetical protein
           chr01_pseudomolecule_IMGAG_V3 7425076-7422203 F
           EGN_Mt090430 20090702
          Length = 178

 Score = 77.4 bits (189), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 50/68 (73%), Gaps = 1/68 (1%)

Query: 254 RLRTAAIRQISERYSVADCIKELDAMQGVEEGIYFAALDLFDNPNAREIFLSLKGDK-RM 312
           RLR        +++S+ +CIK LD ++G+++ +YF+ALDLF+NP+ RE F+SLK  K R+
Sbjct: 106 RLRAVVSSVSDDKFSITNCIKALDEIKGIDQNLYFSALDLFENPSFRETFISLKSVKIRL 165

Query: 313 IWLRGKCT 320
            WL+GKC+
Sbjct: 166 TWLQGKCS 173


>IMGA|Medtr7g035200.1 hypothetical protein
           chr07_pseudomolecule_IMGAG_V3 8566852-8565670 E
           EGN_Mt090430 20090702
          Length = 129

 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 1/88 (1%)

Query: 233 RGRKGIDDXXXXXXXXXXXXXRLRTAAIRQISERYSVADCIKELDAMQGVEEGIYFAALD 292
           R RK   D             ++R +AI +  + +S++ CIK LD M+GV+E +YF ALD
Sbjct: 37  RKRKATGDTIVDAMLEIAAASKMRASAILKNEDMFSISKCIKVLDKMRGVDERVYFHALD 96

Query: 293 LFDN-PNAREIFLSLKGDKRMIWLRGKC 319
           LF+N  +AREIF+S+K  KR+ WL+ KC
Sbjct: 97  LFENSSSAREIFISIKSGKRLPWLQCKC 124


>IMGA|Medtr8g044610.1 hypothetical protein
           chr08_pseudomolecule_IMGAG_V3 10064410-10060462 E
           EGN_Mt090430 20090702
          Length = 351

 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 24  WTTGLTKIFADLLVDQVQKGNKLNNNSFNKKAWTVMCDEFYQKTGLRWDKEQLKNRYSVM 83
           W+  + K   + LV Q + GN+++   FN+ A+T  C        L  + +++ NR   +
Sbjct: 37  WSVPMDKCLIEALVVQAKNGNRVDK-CFNENAYTAACVAVNTYFNLNLNNQKVINRLKTL 95

Query: 84  KRQHSIVKSLINQREFCLDASTGNV-IASNEAWNEYIKAHPDAEPIRVSGCPIFKQLGVI 142
           K+++ ++K +++Q  F  +  T  +    NE W  YI AHPDA+  R     I++QL ++
Sbjct: 96  KKRYKVIKDILSQDGFKWNPDTKMIECDHNELWKRYIAAHPDAKGFRGKQIEIYEQLKIV 155


>IMGA|Medtr6g093550.1 hypothetical protein
           chr06_pseudomolecule_IMGAG_V3 20175859-20177588 H
           EGN_Mt090430 20090702
          Length = 95

 Score = 48.9 bits (115), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 1/91 (1%)

Query: 30  KIFADLLVDQVQKGNKLNNNSFNKKAWTVMCDEFYQKTGLRWDKEQLKNRYSVMKRQHSI 89
           K+F D++VD+V KGN + N  F+ + W+ M  +    T   +  ++LK +   ++  +  
Sbjct: 2   KVFIDIMVDEVTKGN-MPNGVFHTRIWSSMTYKLNTITERLYQADKLKAKMHRLRAMYRE 60

Query: 90  VKSLINQREFCLDASTGNVIASNEAWNEYIK 120
             SL     F  +A T  V A+ E W  Y+K
Sbjct: 61  FYSLKQNTGFGWNAETNTVTATEEVWKNYLK 91