Jatropha Genome Database

JcCB0279111.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0279111.10 - phase: 0 
         (338 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g134210.1 S-adenosylmethionine synthetase chr08_pseud...   524   e-149
IMGA|Medtr7g133710.1 S-adenosylmethionine synthetase chr07_pseud...   523   e-149

>IMGA|Medtr8g134210.1 S-adenosylmethionine synthetase
           chr08_pseudomolecule_IMGAG_V3 32232718-32230045 E
           EGN_Mt090430 20090702
          Length = 421

 Score =  524 bits (1349), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 259/301 (86%), Positives = 265/301 (88%)

Query: 36  KANVDYEKIVRDTCRSIGFVSDDVGLDADKCKVLVYIEQQSPDIAQGVHGHLTKRPEEIG 95
           KA VDYEKIVRDTCR IGFVSDDVGLDAD CKVLV IEQQSPDIAQGVHGHLTKRPEEIG
Sbjct: 90  KAKVDYEKIVRDTCRKIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIG 149

Query: 96  AGDQGHMFGYATDETPEFMPLSHVLATKLGARLTDVRKNGTCPWLRPDGKTQVTVEYYND 155
           AGDQGHMFGYATDETPE MPLSHVLATKLGARLT+VRKNGTCPWLRPDGKTQVTVEYYND
Sbjct: 150 AGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYND 209

Query: 156 NGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFV 215
           NGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP+KYLD KTIFHLNPSGRFV
Sbjct: 210 NGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPDKYLDSKTIFHLNPSGRFV 269

Query: 216 IGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLA 275
           IGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKSIVA+GLA
Sbjct: 270 IGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLA 329

Query: 276 RRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKGDSQDCKRKLRLQAWYDCYNLDLKRGGN 335
           RRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDK      K+    +      NLDL RGGN
Sbjct: 330 RRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILNIVKQNFDFRPGMISINLDLLRGGN 389

Query: 336 G 336
           G
Sbjct: 390 G 390


>IMGA|Medtr7g133710.1 S-adenosylmethionine synthetase
           chr07_pseudomolecule_IMGAG_V3 31361771-31364279 E
           EGN_Mt090430 20090702
          Length = 394

 Score =  523 bits (1346), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 254/300 (84%), Positives = 267/300 (89%)

Query: 36  KANVDYEKIVRDTCRSIGFVSDDVGLDADKCKVLVYIEQQSPDIAQGVHGHLTKRPEEIG 95
           KANVDYEKIVRDTCR+IGF+SDDVGLDADKCKVLV IEQQSPDIAQGVHGH TKRPEE+G
Sbjct: 61  KANVDYEKIVRDTCRTIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEEVG 120

Query: 96  AGDQGHMFGYATDETPEFMPLSHVLATKLGARLTDVRKNGTCPWLRPDGKTQVTVEYYND 155
           AGDQGHMFGYATDETPE MPL+HVLATKLG+RLT+VRKNGTC WLRPDGKTQVT+EYYN+
Sbjct: 121 AGDQGHMFGYATDETPELMPLTHVLATKLGSRLTEVRKNGTCAWLRPDGKTQVTIEYYNE 180

Query: 156 NGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFV 215
           NGAMVPVRVHTVLISTQHDETV+ND+IAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFV
Sbjct: 181 NGAMVPVRVHTVLISTQHDETVSNDQIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFV 240

Query: 216 IGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLA 275
           IGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAY+VRQAAKSIVANGLA
Sbjct: 241 IGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVVRQAAKSIVANGLA 300

Query: 276 RRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKGDSQDCKRKLRLQAWYDCYNLDLKRGGN 335
           RRCIVQVSYAIGVPEPLSVFVDSYGTGKIPD+   Q  K     +      NLDLKRGGN
Sbjct: 301 RRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDREILQIVKENFDFRPGMITINLDLKRGGN 360