Jatropha Genome Database

JcCB0273441.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0273441.10 + phase: 0 
         (212 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g062170.1 Plant Basic Secretory Protein chr03_pseudom...    47   9e-06

>IMGA|Medtr3g062170.1 Plant Basic Secretory Protein
           chr03_pseudomolecule_IMGAG_V3 14264532-14268469 E
           EGN_Mt090430 20090702
          Length = 294

 Score = 46.6 bits (109), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 12/121 (9%)

Query: 100 VIGILYHEMTHIWQWNGNGKTP----GGLIEGIADLV-----RLKANYAPSHWVQPGQGE 150
           ++G +   M  +W W+G  K       G++E IA+L      RL      S   + G+  
Sbjct: 174 IVGAIQRAMARVWLWDGRSKASPRLLDGMVEYIAELAGFHRERLSGGVGESPECEDGREL 233

Query: 151 RWDQGYDVT--ARFLDYCNDLRDGFVADLNKKMRSDYKVEYFVELLGKPVHQLWNEYKAK 208
            WD   D T  AR L YC     GF+  LN+ M+  +      ++LG    +L   Y A 
Sbjct: 234 WWDNK-DPTHVARLLHYCEKYDKGFIQRLNEAMKDTWHDRMVGDVLGLKATKLCGLYNAT 292

Query: 209 H 209
           +
Sbjct: 293 Y 293