Jatropha Genome Database

JcCB0269501.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0269501.10 + phase: 0 /partial
         (213 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g083490.1 Protein of unknown function UPF0044 chr07_p...   315   9e-87
IMGA|Medtr4g159520.1 Protein of unknown function UPF0044 chr04_p...   206   6e-54

>IMGA|Medtr7g083490.1 Protein of unknown function UPF0044
           chr07_pseudomolecule_IMGAG_V3 17844639-17840971 H
           EGN_Mt090430 20090702
          Length = 407

 Score =  315 bits (807), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 148/182 (81%), Positives = 164/182 (90%)

Query: 1   KHAEAVRIKCLGVPTVDMKNVCSQLEDKTFGKIIHRHCGSLVLYRGRNYNPKKRPVIPLM 60
           K+ EAVRIKC+GVPTVDMKNVC+QLEDKTFGK+I RH G+L+LYRGRNYN +KRP IP+M
Sbjct: 202 KYTEAVRIKCMGVPTVDMKNVCTQLEDKTFGKVIFRHGGTLILYRGRNYNSRKRPAIPVM 261

Query: 61  MWRPHEPIYPRLIKTTIDGLSIDETKEMRKRGLAVPALTKLAKNGYYASLVPMVRDAFLT 120
           +W+PHEP+YPRLIKTTIDGLSI+ETK MRKRGLAVPALTKLAKNGYYA LV MVRDAFLT
Sbjct: 262 LWKPHEPVYPRLIKTTIDGLSIEETKAMRKRGLAVPALTKLAKNGYYAHLVTMVRDAFLT 321

Query: 121 NELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYKPPEDGELFADRE 180
            ELVRIDCQGLE+ DYKKIGCKLRDLVPC+LVTF+KEQIVVWRG DYK  +DG    DRE
Sbjct: 322 CELVRIDCQGLERKDYKKIGCKLRDLVPCVLVTFDKEQIVVWRGNDYKYSKDGYFLKDRE 381

Query: 181 FF 182
            F
Sbjct: 382 SF 383


>IMGA|Medtr4g159520.1 Protein of unknown function UPF0044
           chr04_pseudomolecule_IMGAG_V3 40260003-40255331 E
           EGN_Mt090430 20090702
          Length = 698

 Score =  206 bits (524), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 94/168 (55%), Positives = 126/168 (75%)

Query: 1   KHAEAVRIKCLGVPTVDMKNVCSQLEDKTFGKIIHRHCGSLVLYRGRNYNPKKRPVIPLM 60
           K     +IKC+GV TVDM NVC QLE+KT GK+I+R  G + L+RGRNYN K RP  PLM
Sbjct: 211 KRRRVCKIKCIGVCTVDMDNVCQQLEEKTGGKVIYRRGGVIYLFRGRNYNHKTRPRFPLM 270

Query: 61  MWRPHEPIYPRLIKTTIDGLSIDETKEMRKRGLAVPALTKLAKNGYYASLVPMVRDAFLT 120
           +W+P  P+YPRLI+   +GL+++E  EMR++G  +  + KL KNG Y +LV  VR+AF  
Sbjct: 271 LWKPVPPVYPRLIQQVPEGLTLEEATEMRQKGRTLTPICKLGKNGVYYNLVNNVREAFEE 330

Query: 121 NELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYK 168
            ELVR++CQGL KSDY+KIG KLRDLVPC L+++E E I++WRG+++K
Sbjct: 331 CELVRVNCQGLNKSDYRKIGAKLRDLVPCTLLSYENEHILMWRGRNWK 378